RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 KRTAP16-1A8MUX0 517 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 SLC17A2O00624 439 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 SCRG1O75711 98 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 GJB5O95377 273 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 SERPINA3P01011 423 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 CD55P08174 381 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 HSMCR30P0CW71 290 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 CCDC130P13994 396 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 MMP11P24347 488 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 HMGB2P26583 209 aaKnown RBP3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 MAGEA8P43361 318 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 RPL34P49207 117 aaKnown RBP3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 CASP4P49662 377 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 ERVPABLB-1P60509 514 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 OC90Q02509 493 aaPredicted RBP3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 PAX2Q02962 417 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 SERTAD2Q14140 314 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 PHYHD1Q5SRE7 291 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 TPGS2Q68CL5 300 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 ATL3Q6DD88 541 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 GCNT7Q6ZNI0 430 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 TPRA1Q86W33 373 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 SERPINA9Q86WD7 417 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 CDH26Q8IXH8 852 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 DHRSXQ8N5I4 330 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 KIR3DL3Q8N743 410 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 POM121L12Q8N7R1 296 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 ARNTL2Q8WYA1 636 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 BADQ92934 168 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 PSMG2Q969U7 264 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 COQ2Q96H96 371 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 NAF1Q96HR8 494 aaKnown RBP3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 MS4A14Q96JA4 679 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 TUBGCP2Q9BSJ2 902 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 GFRA4Q9GZZ7 299 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 VPS33BQ9H267 617 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 LRRN3Q9H3W5 708 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 PPDPFQ9H3Y8 114 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 GLIPR2Q9H4G4 154 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 SENP1Q9P0U3 644 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 PAK5Q9P286 719 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 PPIAL4AQ9Y536 164 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 TIMM10BQ9Y5J6 103 aa3.73□□□□□ -1.81
HMGB3P31-201ENST00000413333 ARHGEF35A5YM69 484 aa3.72□□□□□ -1.81
HMGB3P31-201ENST00000413333 HELTA6NFD8 242 aa3.72□□□□□ -1.81
HMGB3P31-201ENST00000413333 CCDC169A6NNP5 214 aa3.72□□□□□ -1.81
HMGB3P31-201ENST00000413333 KIF2AO00139 706 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P31-201ENST00000413333 RS1O15537 224 aa3.72□□□□□ -1.81
HMGB3P31-201ENST00000413333 TBX6O95947 436 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P31-201ENST00000413333 PGAM2P15259 253 aa3.72□□□□□ -1.81
HMGB3P31-201ENST00000413333 POLR2EP19388 210 aaKnown RBP3.72□□□□□ -1.81
HMGB3P31-201ENST00000413333 NCF2P19878 526 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P31-201ENST00000413333 MT3P25713 68 aa3.72□□□□□ -1.81
HMGB3P31-201ENST00000413333 GDI1P31150 447 aa3.72□□□□□ -1.81
HMGB3P31-201ENST00000413333 IL2RGP31785 369 aa3.72□□□□□ -1.81
HMGB3P31-201ENST00000413333 EPHX2P34913 555 aa3.72□□□□□ -1.81
HMGB3P31-201ENST00000413333 FNTAP49354 379 aa3.72□□□□□ -1.81
HMGB3P31-201ENST00000413333 HSPA2P54652 639 aa3.72□□□□□ -1.81
HMGB3P31-201ENST00000413333 C1orf61Q13536 156 aa3.72□□□□□ -1.81
HMGB3P31-201ENST00000413333 SLC25A52Q3SY17 297 aa3.72□□□□□ -1.81
HMGB3P31-201ENST00000413333 OR4F3Q6IEY1 312 aa3.72□□□□□ -1.81
HMGB3P31-201ENST00000413333 UFSP1Q6NVU6 142 aa3.72□□□□□ -1.81
HMGB3P31-201ENST00000413333 CCDC50Q8IVM0 306 aa3.72□□□□□ -1.81
HMGB3P31-201ENST00000413333 FGFRL1Q8N441 504 aa3.72□□□□□ -1.81
HMGB3P31-201ENST00000413333 CCDC26Q8TAB7 109 aa3.72□□□□□ -1.81
HMGB3P31-201ENST00000413333 RNF139Q8WU17 664 aa3.72□□□□□ -1.81
HMGB3P31-201ENST00000413333 TCEANC2Q96MN5 208 aa3.72□□□□□ -1.81
HMGB3P31-201ENST00000413333 OR5M11Q96RB7 305 aa3.72□□□□□ -1.81
HMGB3P31-201ENST00000413333 CYP2S1Q96SQ9 504 aa3.72□□□□□ -1.81
HMGB3P31-201ENST00000413333 CAB39LQ9H9S4 337 aa3.72□□□□□ -1.81
HMGB3P31-201ENST00000413333 MIEF1Q9NQG6 463 aa3.72□□□□□ -1.81
HMGB3P31-201ENST00000413333 NANSQ9NR45 359 aa3.72□□□□□ -1.81
HMGB3P31-201ENST00000413333 SEC14L3Q9UDX4 400 aa3.72□□□□□ -1.81
HMGB3P31-201ENST00000413333 RSPH14Q9UHP6 348 aa3.72□□□□□ -1.81
HMGB3P31-201ENST00000413333 SAMD4AQ9UPU9 718 aaKnown RBP3.72□□□□□ -1.81
HMGB3P31-201ENST00000413333 IGHV2-70DA0A0C4DH43 119 aa3.71□□□□□ -1.82
HMGB3P31-201ENST00000413333 A0A1B0GVL5 298 aa3.71□□□□□ -1.82
HMGB3P31-201ENST00000413333 FRG2CA6NGY1 282 aa3.71□□□□□ -1.82
HMGB3P31-201ENST00000413333 POLR2DO15514 142 aaKnown RBP3.71□□□□□ -1.82
HMGB3P31-201ENST00000413333 TAPBPO15533 448 aa3.71□□□□□ -1.82
HMGB3P31-201ENST00000413333 GPAA1O43292 621 aa3.71□□□□□ -1.82
HMGB3P31-201ENST00000413333 CAPN1P07384 714 aa3.71□□□□□ -1.82
HMGB3P31-201ENST00000413333 IMPDH1P20839 514 aa3.71□□□□□ -1.82
HMGB3P31-201ENST00000413333 GCAP28676 217 aa3.71□□□□□ -1.82
HMGB3P31-201ENST00000413333 SHC1P29353 583 aa3.71□□□□□ -1.82
HMGB3P31-201ENST00000413333 XCR1P46094 333 aa3.71□□□□□ -1.82
HMGB3P31-201ENST00000413333 CCT3P49368 545 aaKnown RBP3.71□□□□□ -1.82
HMGB3P31-201ENST00000413333 ACTR3P61158 418 aa3.71□□□□□ -1.82
HMGB3P31-201ENST00000413333 TRIM16LQ309B1 348 aa3.71□□□□□ -1.82
HMGB3P31-201ENST00000413333 EIPR1Q53HC9 387 aa3.71□□□□□ -1.82
HMGB3P31-201ENST00000413333 PDZK1Q5T2W1 519 aa3.71□□□□□ -1.82
HMGB3P31-201ENST00000413333 ZNF772Q68DY9 489 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P31-201ENST00000413333 FAM199XQ6PEV8 388 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P31-201ENST00000413333 NLRP9Q7RTR0 991 aa3.71□□□□□ -1.82
HMGB3P31-201ENST00000413333 TAS2R42Q7RTR8 314 aa3.71□□□□□ -1.82
HMGB3P31-201ENST00000413333 SLC22A9Q8IVM8 553 aa3.71□□□□□ -1.82
HMGB3P31-201ENST00000413333 C9orf40Q8IXQ3 194 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms