RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 HNRNPCL4P0DMR1 293 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 GLI4P10075 376 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 BMP2P12643 396 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 UQCRBP14927 111 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 IL7RP16871 459 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 PGCP20142 388 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 RPS4Y1P22090 263 aaKnown RBP9.86□□□□□ -0.83
CHMP3-205ENST00000409810 ELK4P28324 431 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 CHRNB4P30926 498 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 PGM1P36871 562 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 SLC6A8P48029 635 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 RNF144AP50876 292 aaPredicted RBP9.86□□□□□ -0.83
CHMP3-205ENST00000409810 CLDN18P56856 261 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 KCNJ10P78508 379 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 PMPCAQ10713 525 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 ART3Q13508 389 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 LARS2Q15031 903 aaKnown RBP9.86□□□□□ -0.83
CHMP3-205ENST00000409810 ZSWIM7Q19AV6 140 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 LIN52Q52LA3 116 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 NSUN5P2Q63ZY6 315 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 RTL6Q6ICC9 239 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 CBLN3Q6UW01 205 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 DLEU7Q6UYE1 221 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 NCCRP1Q6ZVX7 275 aaPredicted RBP9.86□□□□□ -0.83
CHMP3-205ENST00000409810 OLIG3Q7RTU3 272 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 CPLX4Q7Z7G2 160 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 RPRMLQ8N4K4 120 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 MARVELD2Q8N4S9 558 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 PCYOX1LQ8NBM8 494 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 FAM71CQ8NEG0 241 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 OR5M1Q8NGP8 315 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 BBS10Q8TAM1 723 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 SLC38A5Q8WUX1 472 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 TMEM234Q8WY98 164 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 SMPDL3BQ92485 455 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 ARSGQ96EG1 525 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 TMEM19Q96HH6 336 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 MRGPRX4Q96LA9 322 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 RNF145Q96MT1 663 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 TRIB1Q96RU8 372 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 CGREF1Q99674 301 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 TREX2Q9BQ50 279 aaPredicted RBP9.86□□□□□ -0.83
CHMP3-205ENST00000409810 ELAC2Q9BQ52 826 aaKnown RBP9.86□□□□□ -0.83
CHMP3-205ENST00000409810 FAM107BQ9H098 131 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 CALHM2Q9HA72 323 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 A4GALTQ9NPC4 353 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 EXOSC3Q9NQT5 275 aaKnown RBP9.86□□□□□ -0.83
CHMP3-205ENST00000409810 PAQR5Q9NXK6 330 aaPredicted RBP9.86□□□□□ -0.83
CHMP3-205ENST00000409810 KLF2Q9Y5W3 355 aaPredicted RBP9.86□□□□□ -0.83
CHMP3-205ENST00000409810 DSPPQ9NZW4 1301 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 KIAA1549Q9HCM3 1950 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 CENPVL1A0A0U1RR11 272 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 A1L4Q6 167 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 HSPB2A8KAH6 182 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 SEC14L5O43304 696 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 NPPAP01160 153 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 THBS1P07996 1170 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 LINGO3P0C6S8 592 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 NID1P14543 1247 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 GPX2P18283 190 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 SLC6A2P23975 617 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 TIMP3P35625 211 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 STARP49675 285 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 RAC1P63000 192 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 FOXF1Q12946 379 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 SKP2Q13309 424 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 CYLC2Q14093 348 aaPredicted RBP9.85□□□□□ -0.83
CHMP3-205ENST00000409810 HSPB2Q16082 182 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 MAPK14Q16539 360 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 TMEM44Q2T9K0 475 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 TRMT5Q32P41 509 aaKnown RBP9.85□□□□□ -0.83
CHMP3-205ENST00000409810 NDUFAF6Q330K2 333 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 RUNDC3AQ59EK9 446 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 PDSS1Q5T2R2 415 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 P4HA3Q7Z4N8 544 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 KRT73Q86Y46 540 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 GRAMD2AQ8IUY3 354 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 MSRB3Q8IXL7 192 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 ZNF440Q8IYI8 595 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 UBQLNLQ8IYU4 475 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 OR52P1PQ8NH57 321 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 ZNF563Q8TA94 476 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 GPR119Q8TDV5 335 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 ST8SIA1Q92185 356 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 ZFP3Q96NJ6 502 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 ANKRD27Q96NW4 1050 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 UCN2Q96RP3 112 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 TM9SF2Q99805 663 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 SH3GL1Q99961 368 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 TUBA1CQ9BQE3 449 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 CPPED1Q9BRF8 314 aaPredicted RBP9.85□□□□□ -0.83
CHMP3-205ENST00000409810 THUMPD3Q9BV44 507 aaKnown RBP9.85□□□□□ -0.83
CHMP3-205ENST00000409810 SPATA5L1Q9BVQ7 753 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 QRSL1Q9H0R6 528 aaKnown RBP9.85□□□□□ -0.83
CHMP3-205ENST00000409810 RUBCNLQ9H714 662 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 BCL2L10Q9HD36 194 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 PLEKHB1Q9UF11 243 aaPredicted RBP9.85□□□□□ -0.83
CHMP3-205ENST00000409810 KCNE5Q9UJ90 142 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 ZNF232Q9UNY5 417 aa9.85□□□□□ -0.83
CHMP3-205ENST00000409810 RNF6Q9Y252 685 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms