RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 ARRDC5A6NEK1 342 aa11.41□□□□□ -0.58
CHMP3-204ENST00000409727 C21orf140B9A014 251 aa11.41□□□□□ -0.58
CHMP3-204ENST00000409727 HCRTR2O43614 444 aa11.41□□□□□ -0.58
CHMP3-204ENST00000409727 ITGA10O75578 1167 aa11.41□□□□□ -0.58
CHMP3-204ENST00000409727 IGFBP1P08833 259 aaPredicted RBP11.41□□□□□ -0.58
CHMP3-204ENST00000409727 LINGO3P0C6S8 592 aa11.41□□□□□ -0.58
CHMP3-204ENST00000409727 ITGAMP11215 1152 aa11.41□□□□□ -0.58
CHMP3-204ENST00000409727 MYBPC1Q00872 1141 aa11.41□□□□□ -0.58
CHMP3-204ENST00000409727 SKP2Q13309 424 aa11.41□□□□□ -0.58
CHMP3-204ENST00000409727 ZER1Q7Z7L7 766 aa11.41□□□□□ -0.58
CHMP3-204ENST00000409727 P3H2Q8IVL5 708 aa11.41□□□□□ -0.58
CHMP3-204ENST00000409727 NRMQ8IXM6 262 aa11.41□□□□□ -0.58
CHMP3-204ENST00000409727 SLC22A8Q8TCC7 542 aa11.41□□□□□ -0.58
CHMP3-204ENST00000409727 GATA6Q92908 595 aa11.41□□□□□ -0.58
CHMP3-204ENST00000409727 FAM46AQ96IP4 442 aaKnown RBP11.41□□□□□ -0.58
CHMP3-204ENST00000409727 RASL10BQ96S79 203 aa11.41□□□□□ -0.58
CHMP3-204ENST00000409727 KLHDC3Q9BQ90 382 aa11.41□□□□□ -0.58
CHMP3-204ENST00000409727 PSD2Q9BQI7 771 aa11.41□□□□□ -0.58
CHMP3-204ENST00000409727 GPR87Q9BY21 358 aa11.41□□□□□ -0.58
CHMP3-204ENST00000409727 GRIP2Q9C0E4 1043 aa11.41□□□□□ -0.58
CHMP3-204ENST00000409727 MMP25Q9NPA2 562 aa11.41□□□□□ -0.58
CHMP3-204ENST00000409727 P4HTMQ9NXG6 502 aa11.41□□□□□ -0.58
CHMP3-204ENST00000409727 DLL3Q9NYJ7 618 aa11.41□□□□□ -0.58
CHMP3-204ENST00000409727 RPS6KB2Q9UBS0 482 aa11.41□□□□□ -0.58
CHMP3-204ENST00000409727 IL17BQ9UHF5 180 aa11.41□□□□□ -0.58
CHMP3-204ENST00000409727 MGAT4BQ9UQ53 548 aa11.41□□□□□ -0.58
CHMP3-204ENST00000409727 GMPPBQ9Y5P6 360 aa11.41□□□□□ -0.58
CHMP3-204ENST00000409727 A0A0B4J2E0 115 aa11.4□□□□□ -0.58
CHMP3-204ENST00000409727 A0A1B0GX12 115 aa11.4□□□□□ -0.58
CHMP3-204ENST00000409727 FMO6PO60774 539 aa11.4□□□□□ -0.58
CHMP3-204ENST00000409727 SMNDC1O75940 238 aaKnown RBP eCLIP11.4□□□□□ -0.58
CHMP3-204ENST00000409727 ANGPTL1O95841 491 aa11.4□□□□□ -0.58
CHMP3-204ENST00000409727 NUDT14O95848 222 aa11.4□□□□□ -0.58
CHMP3-204ENST00000409727 ADAP00813 363 aa11.4□□□□□ -0.58
CHMP3-204ENST00000409727 LYNP07948 512 aa11.4□□□□□ -0.58
CHMP3-204ENST00000409727 ITPKBP27987 946 aa11.4□□□□□ -0.58
CHMP3-204ENST00000409727 GPR4P46093 362 aa11.4□□□□□ -0.58
CHMP3-204ENST00000409727 IDH2P48735 452 aaKnown RBP11.4□□□□□ -0.58
CHMP3-204ENST00000409727 COPZ1P61923 177 aa11.4□□□□□ -0.58
CHMP3-204ENST00000409727 RPP38P78345 283 aaKnown RBP11.4□□□□□ -0.58
CHMP3-204ENST00000409727 ZNF117Q03924 483 aa11.4□□□□□ -0.58
CHMP3-204ENST00000409727 RAPSNQ13702 412 aa11.4□□□□□ -0.58
CHMP3-204ENST00000409727 ZSWIM7Q19AV6 140 aa11.4□□□□□ -0.58
CHMP3-204ENST00000409727 ALG10BQ5I7T1 473 aa11.4□□□□□ -0.58
CHMP3-204ENST00000409727 BICRALQ6AI39 1079 aa11.4□□□□□ -0.58
CHMP3-204ENST00000409727 OR5M10Q6IEU7 315 aa11.4□□□□□ -0.58
CHMP3-204ENST00000409727 USP51Q70EK9 711 aa11.4□□□□□ -0.58
CHMP3-204ENST00000409727 C8orf59Q8N0T1 100 aaPredicted RBP11.4□□□□□ -0.58
CHMP3-204ENST00000409727 ZNF786Q8N393 782 aa11.4□□□□□ -0.58
CHMP3-204ENST00000409727 GALNT15Q8N3T1 639 aa11.4□□□□□ -0.58
CHMP3-204ENST00000409727 PFN4Q8NHR9 129 aa11.4□□□□□ -0.58
CHMP3-204ENST00000409727 M1APQ8TC57 530 aa11.4□□□□□ -0.58
CHMP3-204ENST00000409727 ACOT11Q8WXI4 607 aaPredicted RBP11.4□□□□□ -0.58
CHMP3-204ENST00000409727 NKD1Q969G9 470 aa11.4□□□□□ -0.58
CHMP3-204ENST00000409727 GPA33Q99795 319 aa11.4□□□□□ -0.58
CHMP3-204ENST00000409727 PRSS27Q9BQR3 290 aa11.4□□□□□ -0.58
CHMP3-204ENST00000409727 UCK2Q9BZX2 261 aa11.4□□□□□ -0.58
CHMP3-204ENST00000409727 TRIM2Q9C040 744 aa11.4□□□□□ -0.58
CHMP3-204ENST00000409727 ING2Q9H160 280 aa11.4□□□□□ -0.58
CHMP3-204ENST00000409727 CDCP1Q9H5V8 836 aa11.4□□□□□ -0.58
CHMP3-204ENST00000409727 GALNT9Q9HCQ5 603 aa11.4□□□□□ -0.58
CHMP3-204ENST00000409727 CDV3Q9UKY7 258 aaKnown RBP11.4□□□□□ -0.58
CHMP3-204ENST00000409727 ALG1L2C9J202 215 aa11.4□□□□□ -0.59
CHMP3-204ENST00000409727 H3BN98 237 aa11.4□□□□□ -0.59
CHMP3-204ENST00000409727 TERTO14746 1132 aaKnown RBP11.4□□□□□ -0.59
CHMP3-204ENST00000409727 FADS1O60427 444 aa11.4□□□□□ -0.59
CHMP3-204ENST00000409727 ELK4P28324 431 aa11.4□□□□□ -0.59
CHMP3-204ENST00000409727 LCN1P31025 176 aa11.4□□□□□ -0.59
CHMP3-204ENST00000409727 ADH7P40394 386 aa11.4□□□□□ -0.59
CHMP3-204ENST00000409727 SOX3P41225 446 aa11.4□□□□□ -0.59
CHMP3-204ENST00000409727 PSPHP78330 225 aa11.4□□□□□ -0.59
CHMP3-204ENST00000409727 IL5RAQ01344 420 aa11.4□□□□□ -0.59
CHMP3-204ENST00000409727 Q0VFX4 171 aa11.4□□□□□ -0.59
CHMP3-204ENST00000409727 ATP1A4Q13733 1029 aa11.4□□□□□ -0.59
CHMP3-204ENST00000409727 EFR3AQ14156 821 aa11.4□□□□□ -0.59
CHMP3-204ENST00000409727 TMEM236Q5W0B7 351 aa11.4□□□□□ -0.59
CHMP3-204ENST00000409727 ZNF613Q6PF04 617 aa11.4□□□□□ -0.59
CHMP3-204ENST00000409727 TTC33Q6PID6 262 aaPredicted RBP11.4□□□□□ -0.59
CHMP3-204ENST00000409727 MRGPREQ86SM8 312 aa11.4□□□□□ -0.59
CHMP3-204ENST00000409727 FAM71CQ8NEG0 241 aa11.4□□□□□ -0.59
CHMP3-204ENST00000409727 OR10G3Q8NGC4 313 aa11.4□□□□□ -0.59
CHMP3-204ENST00000409727 ZNF563Q8TA94 476 aa11.4□□□□□ -0.59
CHMP3-204ENST00000409727 PIGXQ8TBF5 258 aa11.4□□□□□ -0.59
CHMP3-204ENST00000409727 DUSP19Q8WTR2 217 aa11.4□□□□□ -0.59
CHMP3-204ENST00000409727 ADAMTS14Q8WXS8 1223 aa11.4□□□□□ -0.59
CHMP3-204ENST00000409727 TMCO6Q96DC7 493 aa11.4□□□□□ -0.59
CHMP3-204ENST00000409727 GABARAPL3Q9BY60 117 aa11.4□□□□□ -0.59
CHMP3-204ENST00000409727 MFRPQ9BY79 579 aa11.4□□□□□ -0.59
CHMP3-204ENST00000409727 POLR2J3Q9H1A7 115 aaKnown RBP11.4□□□□□ -0.59
CHMP3-204ENST00000409727 ANKRD19PQ9H560 264 aa11.4□□□□□ -0.59
CHMP3-204ENST00000409727 PNPLA3Q9NST1 481 aa11.4□□□□□ -0.59
CHMP3-204ENST00000409727 KLRF1Q9NZS2 232 aa11.4□□□□□ -0.59
CHMP3-204ENST00000409727 SELENONQ9NZV5 590 aa11.4□□□□□ -0.59
CHMP3-204ENST00000409727 AASSQ9UDR5 926 aa11.4□□□□□ -0.59
CHMP3-204ENST00000409727 CNOT1A5YKK6 2376 aaKnown RBP11.39□□□□□ -0.59
CHMP3-204ENST00000409727 AHCTF1Q8WYP5 2266 aa11.39□□□□□ -0.59
CHMP3-204ENST00000409727 GVINP1Q7Z2Y8 2422 aa11.39□□□□□ -0.59
CHMP3-204ENST00000409727 MAGEA13PA6NCF6 341 aa11.39□□□□□ -0.59
CHMP3-204ENST00000409727 SLC16A6O15403 523 aa11.39□□□□□ -0.59
CHMP3-204ENST00000409727 GFRA3O60609 400 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms