RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 GAS6Q14393 721 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 Q6ZPB1 254 aaPredicted RBP8.44□□□□□ -1.06
LIG4-202ENST00000405925 HDDC2Q7Z4H3 204 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 ACBD7Q8N6N7 88 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 OR2T4Q8NH00 348 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 NEK7Q8TDX7 302 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 STACQ99469 402 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 ZNF160Q9HCG1 818 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 ATP13A2Q9NQ11 1180 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 NDUFAF4Q9P032 175 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 UPB1Q9UBR1 384 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 ACAD8Q9UKU7 415 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 CDH10Q9Y6N8 788 aa8.44□□□□□ -1.06
LIG4-202ENST00000405925 GREB1Q4ZG55 1949 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 DENRO43583 198 aaKnown RBP8.43□□□□□ -1.06
LIG4-202ENST00000405925 DNAJB5O75953 348 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 MYF6P23409 242 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 TACR3P29371 465 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 MAP3K8P41279 467 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 TUBA4AP68366 448 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 FAM199XQ6PEV8 388 aaPredicted RBP8.43□□□□□ -1.06
LIG4-202ENST00000405925 TBPL2Q6SJ96 375 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 LRRC69Q6ZNQ3 347 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 BPHLQ86WA6 291 aaPredicted RBP8.43□□□□□ -1.06
LIG4-202ENST00000405925 ZNF597Q96LX8 424 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 ANKRD60Q9BZ19 345 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 NXF5Q9H1B4 397 aaKnown RBP8.43□□□□□ -1.06
LIG4-202ENST00000405925 ZNF385DQ9H6B1 395 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 CCDC163A0A0D9SF12 145 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 A0A1W2PPV9 198 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 FAM183AA6NL82 134 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 NID1P14543 1247 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 ITIH1P19827 911 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 HOXD12P35452 270 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 MNDAP41218 407 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 RRADP55042 308 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 PRPS1P60891 318 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 ERVK-25P63136 954 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 RNASE12Q5GAN4 147 aaKnown RBP8.43□□□□□ -1.06
LIG4-202ENST00000405925 SYT14Q8NB59 555 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 PSD4Q8NDX1 1056 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 SDR9C7Q8NEX9 313 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 DIRAS2Q96HU8 199 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 UTP23Q9BRU9 249 aaKnown RBP8.43□□□□□ -1.06
LIG4-202ENST00000405925 STMN3Q9NZ72 180 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 EXOSC1Q9Y3B2 195 aaKnown RBP8.43□□□□□ -1.06
LIG4-202ENST00000405925 NPFFR2Q9Y5X5 522 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 FNDC1Q4ZHG4 1894 aaPredicted RBP8.43□□□□□ -1.06
LIG4-202ENST00000405925 SMIM30A4D0T7 59 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 ANKRD28O15084 1053 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 CHRM4P08173 479 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 HLCSP50747 726 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 C17orf67Q0P5P2 114 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 SLC14A1Q13336 389 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 APOFQ13790 326 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 EXT1Q16394 746 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 FAM131AQ6UXB0 335 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 CPEB2Q7Z5Q1 589 aaKnown RBP8.43□□□□□ -1.06
LIG4-202ENST00000405925 MARCH3Q86UD3 253 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 UEVLDQ8IX04 471 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 TMEM102Q8N9M5 508 aaPredicted RBP8.43□□□□□ -1.06
LIG4-202ENST00000405925 ANKK1Q8NFD2 765 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 OR13C2Q8NGS9 318 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 SNIP1Q8TAD8 396 aaKnown RBP8.43□□□□□ -1.06
LIG4-202ENST00000405925 KCTD7Q96MP8 289 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 AMBRA1Q9C0C7 1298 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 CDCP1Q9H5V8 836 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 THSD1Q9NS62 852 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 BAIAP2Q9UQB8 552 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 PCDHGA8Q9Y5G5 932 aa8.43□□□□□ -1.06
LIG4-202ENST00000405925 CCDC187A0A096LP49 1063 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 CLDN24A6NM45 220 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 GJE1A6NN92 205 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 LOC110117498-PIK3R3F6TDL0 507 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 STK17BO94768 372 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 MT-CO3P00414 261 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 SERPINA3P01011 423 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 HLA-DPB1P04440 258 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 ALPLP05186 524 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 HTR1AP08908 422 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 CD46P15529 392 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 SLC15A1P46059 708 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 SOX2P48431 317 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 GIPRP48546 466 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 ZNF84P51523 738 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 HSF2Q03933 536 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 KCTD18Q6PI47 426 aaPredicted RBP8.42□□□□□ -1.06
LIG4-202ENST00000405925 WDR5BQ86VZ2 330 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 ZNF100Q8IYN0 542 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 POC5Q8NA72 575 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 ZNF675Q8TD23 568 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 THAP4Q8WY91 577 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 TFAP2CQ92754 450 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 PHOX2BQ99453 314 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 SAP130Q9H0E3 1048 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 DCSTAMPQ9H295 470 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 DSN1Q9H410 356 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 COMMD3Q9UBI1 195 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 FBXO4Q9UKT5 387 aa8.42□□□□□ -1.06
LIG4-202ENST00000405925 BOKQ9UMX3 212 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms