RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 HNRNPCL2B2RXH8 293 aa12.89□□□□□ -0.35
HDDC2-202ENST00000398153 HNRNPCL3B7ZW38 293 aa12.89□□□□□ -0.35
HDDC2-202ENST00000398153 PRSS44E7EML9 344 aa12.89□□□□□ -0.35
HDDC2-202ENST00000398153 NPIPA7E9PJI5 369 aa12.89□□□□□ -0.35
HDDC2-202ENST00000398153 SLC22A2O15244 555 aa12.89□□□□□ -0.35
HDDC2-202ENST00000398153 HNRNPCL1O60812 293 aaKnown RBP12.89□□□□□ -0.35
HDDC2-202ENST00000398153 NUDT14O95848 222 aa12.89□□□□□ -0.35
HDDC2-202ENST00000398153 IL18BPO95998 194 aa12.89□□□□□ -0.35
HDDC2-202ENST00000398153 DBIP07108 87 aaKnown RBP12.89□□□□□ -0.35
HDDC2-202ENST00000398153 SNRPB2P08579 225 aaKnown RBP12.89□□□□□ -0.35
HDDC2-202ENST00000398153 NPIPA8P0DM63 369 aa12.89□□□□□ -0.35
HDDC2-202ENST00000398153 HNRNPCL4P0DMR1 293 aa12.89□□□□□ -0.35
HDDC2-202ENST00000398153 GPX2P18283 190 aa12.89□□□□□ -0.35
HDDC2-202ENST00000398153 PGCP20142 388 aa12.89□□□□□ -0.35
HDDC2-202ENST00000398153 RPS4Y1P22090 263 aaKnown RBP12.89□□□□□ -0.35
HDDC2-202ENST00000398153 PSMA4P25789 261 aaKnown RBP12.89□□□□□ -0.35
HDDC2-202ENST00000398153 PGM1P36871 562 aa12.89□□□□□ -0.35
HDDC2-202ENST00000398153 STARP49675 285 aa12.89□□□□□ -0.35
HDDC2-202ENST00000398153 CHRNEQ04844 493 aa12.89□□□□□ -0.35
HDDC2-202ENST00000398153 SRYQ05066 204 aa12.89□□□□□ -0.35
HDDC2-202ENST00000398153 SKP2Q13309 424 aa12.89□□□□□ -0.35
HDDC2-202ENST00000398153 SLC25A53Q5H9E4 307 aa12.89□□□□□ -0.35
HDDC2-202ENST00000398153 COQ5Q5HYK3 327 aa12.89□□□□□ -0.35
HDDC2-202ENST00000398153 PAGE3Q5JUK9 113 aa12.89□□□□□ -0.35
HDDC2-202ENST00000398153 OR2A2Q6IF42 318 aa12.89□□□□□ -0.35
HDDC2-202ENST00000398153 SEM1Q6ZVN7 128 aa12.89□□□□□ -0.35
HDDC2-202ENST00000398153 NCCRP1Q6ZVX7 275 aaPredicted RBP12.89□□□□□ -0.35
HDDC2-202ENST00000398153 PEX5LQ8IYB4 626 aa12.89□□□□□ -0.35
HDDC2-202ENST00000398153 PNPT1Q8TCS8 783 aaKnown RBP12.89□□□□□ -0.35
HDDC2-202ENST00000398153 TMEM234Q8WY98 164 aa12.89□□□□□ -0.35
HDDC2-202ENST00000398153 ST8SIA1Q92185 356 aa12.89□□□□□ -0.35
HDDC2-202ENST00000398153 TRIB1Q96RU8 372 aa12.89□□□□□ -0.35
HDDC2-202ENST00000398153 TUBA1CQ9BQE3 449 aa12.89□□□□□ -0.35
HDDC2-202ENST00000398153 RUBCNLQ9H714 662 aa12.89□□□□□ -0.35
HDDC2-202ENST00000398153 Q9UFV3 132 aa12.89□□□□□ -0.35
HDDC2-202ENST00000398153 DSPPQ9NZW4 1301 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 GJE1A6NN92 205 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 CLCA1A8K7I4 914 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 H3BML4 177 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 DVL2O14641 736 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 TOXO94900 526 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 RCBTB2O95199 551 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 NPPAP01160 153 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 CRHP06850 196 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 CHRM4P08173 479 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 ETFAP13804 333 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 NID1P14543 1247 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 IL7RP16871 459 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 FKBP2P26885 142 aaKnown RBP12.88□□□□□ -0.35
HDDC2-202ENST00000398153 OPRM1P35372 400 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 SLC6A8P48029 635 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 DLX5P56178 289 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 MAPRE2Q15555 327 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 MAPK14Q16539 360 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 GTDC1Q4AE62 458 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 PDSS1Q5T2R2 415 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 SP5Q6BEB4 398 aaPredicted RBP12.88□□□□□ -0.35
HDDC2-202ENST00000398153 CGB2Q6NT52 195 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 DLEU7Q6UYE1 221 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 ESPNLQ6ZVH7 1005 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 ANKFN1Q8N957 763 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 SLC38A5Q8WUX1 472 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 ZG16BQ96DA0 208 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 LRRC46Q96FV0 321 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 AURKBQ96GD4 344 aaPredicted RBP12.88□□□□□ -0.35
HDDC2-202ENST00000398153 ARMC7Q9H6L4 198 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 CACYBPQ9HB71 228 aaKnown RBP12.88□□□□□ -0.35
HDDC2-202ENST00000398153 SLC24A3Q9HC58 644 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 BCL2L10Q9HD36 194 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 A4GALTQ9NPC4 353 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 SLC25A37Q9NYZ2 338 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 VAPAQ9P0L0 249 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 CLCF1Q9UBD9 225 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 ZNF232Q9UNY5 417 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 ZNF175Q9Y473 711 aa12.88□□□□□ -0.35
HDDC2-202ENST00000398153 BBIP1A8MTZ0 92 aa12.87□□□□□ -0.35
HDDC2-202ENST00000398153 FAAHO00519 579 aa12.87□□□□□ -0.35
HDDC2-202ENST00000398153 ADAMDEC1O15204 470 aa12.87□□□□□ -0.35
HDDC2-202ENST00000398153 GMFGO60234 142 aa12.87□□□□□ -0.35
HDDC2-202ENST00000398153 NTN1O95631 604 aa12.87□□□□□ -0.35
HDDC2-202ENST00000398153 C1QCP02747 245 aa12.87□□□□□ -0.35
HDDC2-202ENST00000398153 THBS1P07996 1170 aa12.87□□□□□ -0.35
HDDC2-202ENST00000398153 FCGR2AP12318 317 aa12.87□□□□□ -0.35
HDDC2-202ENST00000398153 UQCRBP14927 111 aa12.87□□□□□ -0.35
HDDC2-202ENST00000398153 PRKCAP17252 672 aa12.87□□□□□ -0.35
HDDC2-202ENST00000398153 CTSSP25774 331 aa12.87□□□□□ -0.35
HDDC2-202ENST00000398153 PEX19P40855 299 aa12.87□□□□□ -0.35
HDDC2-202ENST00000398153 GRAMD2AQ8IUY3 354 aa12.87□□□□□ -0.35
HDDC2-202ENST00000398153 CCDC71Q8IV32 467 aaPredicted RBP12.87□□□□□ -0.35
HDDC2-202ENST00000398153 MSRB3Q8IXL7 192 aa12.87□□□□□ -0.35
HDDC2-202ENST00000398153 ZNF440Q8IYI8 595 aa12.87□□□□□ -0.35
HDDC2-202ENST00000398153 TMCO5AQ8N6Q1 288 aa12.87□□□□□ -0.35
HDDC2-202ENST00000398153 TNIP2Q8NFZ5 429 aa12.87□□□□□ -0.35
HDDC2-202ENST00000398153 WDR60Q8WVS4 1066 aa12.87□□□□□ -0.35
HDDC2-202ENST00000398153 RNF145Q96MT1 663 aa12.87□□□□□ -0.35
HDDC2-202ENST00000398153 TREX2Q9BQ50 279 aaPredicted RBP12.87□□□□□ -0.35
HDDC2-202ENST00000398153 TMEM38AQ9H6F2 299 aa12.87□□□□□ -0.35
HDDC2-202ENST00000398153 SLAMF8Q9P0V8 285 aa12.87□□□□□ -0.35
HDDC2-202ENST00000398153 IFT52Q9Y366 437 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms