RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 ZPLD1Q8TCW7 415 aa17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 GPR119Q8TDV5 335 aa17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 WDR60Q8WVS4 1066 aa17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 RND1Q92730 232 aa17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 ARSGQ96EG1 525 aa17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 PSMG3-AS1Q96PY0 264 aa17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 TREX2Q9BQ50 279 aaPredicted RBP17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 CPPED1Q9BRF8 314 aaPredicted RBP17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 TTYH2Q9BSA4 534 aa17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 CACYBPQ9HB71 228 aaKnown RBP17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 COQ3Q9NZJ6 369 aa17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 ZNF232Q9UNY5 417 aa17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 FAM215AQ9Y5M1 114 aa17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 AP4B1Q9Y6B7 739 aa17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 PHF3Q92576 2039 aaKnown RBP17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 C7orf72A4D263 438 aa17.17■□□□□ 0.34
PDLIM7-204ENST00000393546 SHISA8B8ZZ34 492 aa17.17■□□□□ 0.34
PDLIM7-204ENST00000393546 H0Y3Z8 333 aa17.17■□□□□ 0.34
PDLIM7-204ENST00000393546 MRASO14807 208 aa17.17■□□□□ 0.34
PDLIM7-204ENST00000393546 EPPINO95925 133 aa17.17■□□□□ 0.34
PDLIM7-204ENST00000393546 NPPAP01160 153 aa17.17■□□□□ 0.34
PDLIM7-204ENST00000393546 LINGO3P0C6S8 592 aa17.17■□□□□ 0.34
PDLIM7-204ENST00000393546 GLI4P10075 376 aa17.17■□□□□ 0.34
PDLIM7-204ENST00000393546 AGAP20933 346 aa17.17■□□□□ 0.34
PDLIM7-204ENST00000393546 PGM1P36871 562 aa17.17■□□□□ 0.34
PDLIM7-204ENST00000393546 CCR4P51679 360 aa17.17■□□□□ 0.34
PDLIM7-204ENST00000393546 NUP107P57740 925 aa17.17■□□□□ 0.34
PDLIM7-204ENST00000393546 EEFSECP57772 596 aaKnown RBP17.17■□□□□ 0.34
PDLIM7-204ENST00000393546 SKP2Q13309 424 aa17.17■□□□□ 0.34
PDLIM7-204ENST00000393546 TRMT5Q32P41 509 aaKnown RBP17.17■□□□□ 0.34
PDLIM7-204ENST00000393546 ACSF3Q4G176 576 aaPredicted RBP17.17■□□□□ 0.34
PDLIM7-204ENST00000393546 CHMP1BQ7LBR1 199 aa17.17■□□□□ 0.34
PDLIM7-204ENST00000393546 MARVELD2Q8N4S9 558 aa17.17■□□□□ 0.34
PDLIM7-204ENST00000393546 MEIOBQ8N635 442 aa17.17■□□□□ 0.34
PDLIM7-204ENST00000393546 OR10Q1Q8NGQ4 319 aa17.17■□□□□ 0.34
PDLIM7-204ENST00000393546 OR52P1PQ8NH57 321 aa17.17■□□□□ 0.34
PDLIM7-204ENST00000393546 RP9Q8TA86 221 aaKnown RBP17.17■□□□□ 0.34
PDLIM7-204ENST00000393546 ITLN2Q8WWU7 325 aaPredicted RBP17.17■□□□□ 0.34
PDLIM7-204ENST00000393546 MAL2Q969L2 176 aa17.17■□□□□ 0.34
PDLIM7-204ENST00000393546 KLHDC3Q9BQ90 382 aa17.17■□□□□ 0.34
PDLIM7-204ENST00000393546 IKZF5Q9H5V7 419 aa17.17■□□□□ 0.34
PDLIM7-204ENST00000393546 GID8Q9NWU2 228 aa17.17■□□□□ 0.34
PDLIM7-204ENST00000393546 GPC6Q9Y625 555 aaPredicted RBP17.17■□□□□ 0.34
PDLIM7-204ENST00000393546 H3BML4 177 aa17.16■□□□□ 0.34
PDLIM7-204ENST00000393546 ARAFP10398 606 aa17.16■□□□□ 0.34
PDLIM7-204ENST00000393546 ZNF708P17019 499 aa17.16■□□□□ 0.34
PDLIM7-204ENST00000393546 PGCP20142 388 aa17.16■□□□□ 0.34
PDLIM7-204ENST00000393546 RPS4Y1P22090 263 aaKnown RBP17.16■□□□□ 0.34
PDLIM7-204ENST00000393546 ADH6P28332 368 aa17.16■□□□□ 0.34
PDLIM7-204ENST00000393546 CLDN18P56856 261 aa17.16■□□□□ 0.34
PDLIM7-204ENST00000393546 CDK6Q00534 326 aa17.16■□□□□ 0.34
PDLIM7-204ENST00000393546 RPS26P11Q5JNZ5 115 aaPredicted RBP17.16■□□□□ 0.34
PDLIM7-204ENST00000393546 REP15Q6BDI9 236 aa17.16■□□□□ 0.34
PDLIM7-204ENST00000393546 UBQLNLQ8IYU4 475 aa17.16■□□□□ 0.34
PDLIM7-204ENST00000393546 BBS10Q8TAM1 723 aa17.16■□□□□ 0.34
PDLIM7-204ENST00000393546 RNF145Q96MT1 663 aa17.16■□□□□ 0.34
PDLIM7-204ENST00000393546 TRIB1Q96RU8 372 aa17.16■□□□□ 0.34
PDLIM7-204ENST00000393546 SH3GL1Q99961 368 aa17.16■□□□□ 0.34
PDLIM7-204ENST00000393546 CCDC106Q9BWC9 280 aa17.16■□□□□ 0.34
PDLIM7-204ENST00000393546 TMEM38AQ9H6F2 299 aa17.16■□□□□ 0.34
PDLIM7-204ENST00000393546 CALHM2Q9HA72 323 aa17.16■□□□□ 0.34
PDLIM7-204ENST00000393546 BCL2L10Q9HD36 194 aa17.16■□□□□ 0.34
PDLIM7-204ENST00000393546 FAM53CQ9NYF3 392 aa17.16■□□□□ 0.34
PDLIM7-204ENST00000393546 IFT52Q9Y366 437 aa17.16■□□□□ 0.34
PDLIM7-204ENST00000393546 SETXQ7Z333 2677 aaKnown RBP17.16■□□□□ 0.34
PDLIM7-204ENST00000393546 DSPPQ9NZW4 1301 aa17.16■□□□□ 0.34
PDLIM7-204ENST00000393546 DOPEY1Q5JWR5 2465 aa17.15■□□□□ 0.34
PDLIM7-204ENST00000393546 HEATR5AQ86XA9 2040 aa17.15■□□□□ 0.34
PDLIM7-204ENST00000393546 CD8B2A6NJW9 211 aa17.15■□□□□ 0.34
PDLIM7-204ENST00000393546 CLDN24A6NM45 220 aa17.15■□□□□ 0.34
PDLIM7-204ENST00000393546 PGM3O95394 542 aa17.15■□□□□ 0.34
PDLIM7-204ENST00000393546 NID1P14543 1247 aa17.15■□□□□ 0.34
PDLIM7-204ENST00000393546 SLC6A2P23975 617 aa17.15■□□□□ 0.34
PDLIM7-204ENST00000393546 MTPNP58546 118 aa17.15■□□□□ 0.34
PDLIM7-204ENST00000393546 CAPRIN1Q14444 709 aaKnown RBP17.15■□□□□ 0.34
PDLIM7-204ENST00000393546 LARS2Q15031 903 aaKnown RBP17.15■□□□□ 0.34
PDLIM7-204ENST00000393546 QPRTQ15274 297 aa17.15■□□□□ 0.34
PDLIM7-204ENST00000393546 TOMM34Q15785 309 aaPredicted RBP17.15■□□□□ 0.34
PDLIM7-204ENST00000393546 ZSWIM7Q19AV6 140 aa17.15■□□□□ 0.34
PDLIM7-204ENST00000393546 LIN52Q52LA3 116 aa17.15■□□□□ 0.34
PDLIM7-204ENST00000393546 NSUN5P2Q63ZY6 315 aa17.15■□□□□ 0.34
PDLIM7-204ENST00000393546 REEP3Q6NUK4 255 aa17.15■□□□□ 0.34
PDLIM7-204ENST00000393546 LACC1Q8IV20 430 aa17.15■□□□□ 0.34
PDLIM7-204ENST00000393546 C10orf111Q8N326 155 aa17.15■□□□□ 0.34
PDLIM7-204ENST00000393546 FAM71CQ8NEG0 241 aa17.15■□□□□ 0.34
PDLIM7-204ENST00000393546 FBXO27Q8NI29 283 aa17.15■□□□□ 0.34
PDLIM7-204ENST00000393546 NFKBIDQ8NI38 313 aa17.15■□□□□ 0.34
PDLIM7-204ENST00000393546 POC1BQ8TC44 478 aa17.15■□□□□ 0.34
PDLIM7-204ENST00000393546 ASB5Q8WWX0 329 aa17.15■□□□□ 0.34
PDLIM7-204ENST00000393546 SMPDL3BQ92485 455 aa17.15■□□□□ 0.34
PDLIM7-204ENST00000393546 CNOT9Q92600 299 aaKnown RBP17.15■□□□□ 0.34
PDLIM7-204ENST00000393546 SDCCAG3Q96C92 435 aa17.15■□□□□ 0.34
PDLIM7-204ENST00000393546 LRRC58Q96CX6 371 aa17.15■□□□□ 0.34
PDLIM7-204ENST00000393546 TUBA1CQ9BQE3 449 aa17.15■□□□□ 0.34
PDLIM7-204ENST00000393546 ARMC7Q9H6L4 198 aa17.15■□□□□ 0.34
PDLIM7-204ENST00000393546 EXOSC3Q9NQT5 275 aaKnown RBP17.15■□□□□ 0.34
PDLIM7-204ENST00000393546 SPTBN1Q01082 2364 aaKnown RBP17.15■□□□□ 0.34
PDLIM7-204ENST00000393546 NCOA6Q14686 2063 aaPredicted RBP17.14■□□□□ 0.33
PDLIM7-204ENST00000393546 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.14■□□□□ 0.33
PDLIM7-204ENST00000393546 DNAJA2O60884 412 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms