RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 BCL2L10Q9HD36 194 aa13.61□□□□□ -0.23
IGHV3-53-201ENST00000390627 EXOSC3Q9NQT5 275 aaKnown RBP13.61□□□□□ -0.23
IGHV3-53-201ENST00000390627 GID8Q9NWU2 228 aa13.61□□□□□ -0.23
IGHV3-53-201ENST00000390627 MYO7BQ6PIF6 2116 aa13.61□□□□□ -0.23
IGHV3-53-201ENST00000390627 H3BML4 177 aa13.6□□□□□ -0.23
IGHV3-53-201ENST00000390627 ZG16O60844 167 aa13.6□□□□□ -0.23
IGHV3-53-201ENST00000390627 THBS1P07996 1170 aa13.6□□□□□ -0.23
IGHV3-53-201ENST00000390627 LINGO3P0C6S8 592 aa13.6□□□□□ -0.23
IGHV3-53-201ENST00000390627 NID1P14543 1247 aa13.6□□□□□ -0.23
IGHV3-53-201ENST00000390627 ZNF708P17019 499 aa13.6□□□□□ -0.23
IGHV3-53-201ENST00000390627 PGCP20142 388 aa13.6□□□□□ -0.23
IGHV3-53-201ENST00000390627 LHX2P50458 406 aa13.6□□□□□ -0.23
IGHV3-53-201ENST00000390627 CDK6Q00534 326 aa13.6□□□□□ -0.23
IGHV3-53-201ENST00000390627 CAPRIN1Q14444 709 aaKnown RBP13.6□□□□□ -0.23
IGHV3-53-201ENST00000390627 LARS2Q15031 903 aaKnown RBP13.6□□□□□ -0.23
IGHV3-53-201ENST00000390627 CYP51A1Q16850 503 aa13.6□□□□□ -0.23
IGHV3-53-201ENST00000390627 ZSWIM7Q19AV6 140 aa13.6□□□□□ -0.23
IGHV3-53-201ENST00000390627 ACSF3Q4G176 576 aaPredicted RBP13.6□□□□□ -0.23
IGHV3-53-201ENST00000390627 RPS26P11Q5JNZ5 115 aaPredicted RBP13.6□□□□□ -0.23
IGHV3-53-201ENST00000390627 PIGWQ7Z7B1 504 aa13.6□□□□□ -0.23
IGHV3-53-201ENST00000390627 HMGN2P46Q86SG4 172 aa13.6□□□□□ -0.23
IGHV3-53-201ENST00000390627 MEIOBQ8N635 442 aa13.6□□□□□ -0.23
IGHV3-53-201ENST00000390627 OR8J3Q8NGG0 315 aa13.6□□□□□ -0.23
IGHV3-53-201ENST00000390627 OR5M1Q8NGP8 315 aa13.6□□□□□ -0.23
IGHV3-53-201ENST00000390627 OR52P1PQ8NH57 321 aa13.6□□□□□ -0.23
IGHV3-53-201ENST00000390627 NFKBIDQ8NI38 313 aa13.6□□□□□ -0.23
IGHV3-53-201ENST00000390627 LRRC58Q96CX6 371 aa13.6□□□□□ -0.23
IGHV3-53-201ENST00000390627 ARMC7Q9H6L4 198 aa13.6□□□□□ -0.23
IGHV3-53-201ENST00000390627 ZNF232Q9UNY5 417 aa13.6□□□□□ -0.23
IGHV3-53-201ENST00000390627 ANGPT4Q9Y264 503 aa13.6□□□□□ -0.23
IGHV3-53-201ENST00000390627 ARL2BPQ9Y2Y0 163 aa13.6□□□□□ -0.23
IGHV3-53-201ENST00000390627 IFT52Q9Y366 437 aa13.6□□□□□ -0.23
IGHV3-53-201ENST00000390627 GPC6Q9Y625 555 aaPredicted RBP13.6□□□□□ -0.23
IGHV3-53-201ENST00000390627 AP4B1Q9Y6B7 739 aa13.6□□□□□ -0.23
IGHV3-53-201ENST00000390627 GCN1Q92616 2671 aaKnown RBP13.6□□□□□ -0.23
IGHV3-53-201ENST00000390627 DIDO1Q9BTC0 2240 aaKnown RBP13.6□□□□□ -0.23
IGHV3-53-201ENST00000390627 PGM3O95394 542 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 RNF224P0DH78 156 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 COX4I1P13073 169 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 ETS2P15036 469 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 ME2P23368 584 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 SLC6A2P23975 617 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 ELK4P28324 431 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 ADH6P28332 368 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 SLC6A8P48029 635 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 STARP49675 285 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 EEFSECP57772 596 aaKnown RBP13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 ADORA2A-AS1P86434 159 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 SRYQ05066 204 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 RBBP4Q09028 425 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 FOXF1Q12946 379 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 SCARB2Q14108 478 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 MRPL2Q5T653 305 aaKnown RBP13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 RNF220Q5VTB9 566 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 RTL6Q6ICC9 239 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 REEP3Q6NUK4 255 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 SERPINA11Q86U17 422 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 KRT73Q86Y46 540 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 LACC1Q8IV20 430 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 ZNF440Q8IYI8 595 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 C10orf111Q8N326 155 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 ZNF808Q8N4W9 903 aaPredicted RBP13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 POU5F2Q8N7G0 328 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 C11orf65Q8NCR3 313 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 ZPLD1Q8TCW7 415 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 GPR119Q8TDV5 335 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 TMEM234Q8WY98 164 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 RND1Q92730 232 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 RCN3Q96D15 328 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 CMTM5Q96DZ9 223 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 MRGPRX4Q96LA9 322 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 RNF145Q96MT1 663 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 KLHDC3Q9BQ90 382 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 TTYH2Q9BSA4 534 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 SPATA9Q9BWV2 254 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 MYLK2Q9H1R3 596 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 KAT8Q9H7Z6 458 aaKnown RBP13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 COQ3Q9NZJ6 369 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 ZNF443Q9Y2A4 671 aaPredicted RBP13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 ZNF337Q9Y3M9 751 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 FAM215AQ9Y5M1 114 aa13.59□□□□□ -0.23
IGHV3-53-201ENST00000390627 PCNX3Q9H6A9 2034 aa13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 CLDN24A6NM45 220 aa13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 SHISA8B8ZZ34 492 aa13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 FXYD1O00168 92 aa13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 DNAJA2O60884 412 aa13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 DCTN3O75935 186 aa13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 EPPINO95925 133 aa13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 FAM107AO95990 144 aa13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 UQCRBP14927 111 aa13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 PRKCAP17252 672 aa13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 AGAP20933 346 aa13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 CLDN18P56856 261 aa13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 NUP107P57740 925 aa13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 PMPCAQ10713 525 aa13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 SELPLGQ14242 412 aa13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 QPRTQ15274 297 aa13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 NSUN5P2Q63ZY6 315 aa13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 NANOGP8Q6NSW7 305 aa13.58□□□□□ -0.24
IGHV3-53-201ENST00000390627 XKRXQ6PP77 449 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms