RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 AP1ARQ63HQ0 302 aa10.85□□□□□ -0.67
HDAC8-201ENST00000373554 HIST2H2BCQ6DN03 193 aa10.85□□□□□ -0.67
HDAC8-201ENST00000373554 CGB2Q6NT52 195 aa10.85□□□□□ -0.67
HDAC8-201ENST00000373554 SEM1Q6ZVN7 128 aa10.85□□□□□ -0.67
HDAC8-201ENST00000373554 GRAMD2AQ8IUY3 354 aa10.85□□□□□ -0.67
HDAC8-201ENST00000373554 PEX5LQ8IYB4 626 aa10.85□□□□□ -0.67
HDAC8-201ENST00000373554 TNIP2Q8NFZ5 429 aa10.85□□□□□ -0.67
HDAC8-201ENST00000373554 OR5W2Q8NH69 310 aa10.85□□□□□ -0.67
HDAC8-201ENST00000373554 LILRB4Q8NHJ6 448 aa10.85□□□□□ -0.67
HDAC8-201ENST00000373554 MBD3L2Q8NHZ7 208 aaPredicted RBP10.85□□□□□ -0.67
HDAC8-201ENST00000373554 TSPEARQ8WU66 669 aa10.85□□□□□ -0.67
HDAC8-201ENST00000373554 PMM1Q92871 262 aa10.85□□□□□ -0.67
HDAC8-201ENST00000373554 ARSGQ96EG1 525 aa10.85□□□□□ -0.67
HDAC8-201ENST00000373554 TM9SF2Q99805 663 aa10.85□□□□□ -0.67
HDAC8-201ENST00000373554 RUBCNLQ9H714 662 aa10.85□□□□□ -0.67
HDAC8-201ENST00000373554 KCNJ16Q9NPI9 418 aa10.85□□□□□ -0.67
HDAC8-201ENST00000373554 SLC52A3Q9NQ40 469 aa10.85□□□□□ -0.67
HDAC8-201ENST00000373554 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.85□□□□□ -0.67
HDAC8-201ENST00000373554 SLC25A37Q9NYZ2 338 aa10.85□□□□□ -0.67
HDAC8-201ENST00000373554 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.85□□□□□ -0.67
HDAC8-201ENST00000373554 CORO2BQ9UQ03 480 aa10.85□□□□□ -0.67
HDAC8-201ENST00000373554 NDUFAF1Q9Y375 327 aa10.85□□□□□ -0.67
HDAC8-201ENST00000373554 GPC6Q9Y625 555 aaPredicted RBP10.85□□□□□ -0.67
HDAC8-201ENST00000373554 AGAP5A6NIR3 686 aa10.84□□□□□ -0.67
HDAC8-201ENST00000373554 EVPLLA8MZ36 301 aa10.84□□□□□ -0.67
HDAC8-201ENST00000373554 KDM4EB2RXH2 506 aaPredicted RBP10.84□□□□□ -0.67
HDAC8-201ENST00000373554 TOXO94900 526 aa10.84□□□□□ -0.67
HDAC8-201ENST00000373554 DBIP07108 87 aaKnown RBP10.84□□□□□ -0.67
HDAC8-201ENST00000373554 SNRPB2P08579 225 aaKnown RBP10.84□□□□□ -0.67
HDAC8-201ENST00000373554 HOXB9P17482 250 aaPredicted RBP10.84□□□□□ -0.67
HDAC8-201ENST00000373554 ADH6P28332 368 aa10.84□□□□□ -0.67
HDAC8-201ENST00000373554 GRNP28799 593 aaKnown RBP10.84□□□□□ -0.67
HDAC8-201ENST00000373554 CEACAM8P31997 349 aaPredicted RBP10.84□□□□□ -0.67
HDAC8-201ENST00000373554 CLDN20P56880 219 aa10.84□□□□□ -0.67
HDAC8-201ENST00000373554 RPS3AP61247 264 aaKnown RBP10.84□□□□□ -0.67
HDAC8-201ENST00000373554 KCNJ10P78508 379 aa10.84□□□□□ -0.67
HDAC8-201ENST00000373554 SF3A3Q12874 501 aaKnown RBP eCLIP10.84□□□□□ -0.67
HDAC8-201ENST00000373554 SLC25A35Q3KQZ1 300 aa10.84□□□□□ -0.67
HDAC8-201ENST00000373554 P4HA3Q7Z4N8 544 aa10.84□□□□□ -0.67
HDAC8-201ENST00000373554 HMGN2P46Q86SG4 172 aa10.84□□□□□ -0.67
HDAC8-201ENST00000373554 ADGRE4PQ86SQ3 457 aa10.84□□□□□ -0.67
HDAC8-201ENST00000373554 DHDDSQ86SQ9 333 aa10.84□□□□□ -0.67
HDAC8-201ENST00000373554 CMIPQ8IY22 773 aa10.84□□□□□ -0.67
HDAC8-201ENST00000373554 NAXEQ8NCW5 288 aa10.84□□□□□ -0.67
HDAC8-201ENST00000373554 SLC38A5Q8WUX1 472 aa10.84□□□□□ -0.67
HDAC8-201ENST00000373554 WDR60Q8WVS4 1066 aa10.84□□□□□ -0.67
HDAC8-201ENST00000373554 WNT2BQ93097 391 aa10.84□□□□□ -0.67
HDAC8-201ENST00000373554 ZFP3Q96NJ6 502 aa10.84□□□□□ -0.67
HDAC8-201ENST00000373554 KLHDC3Q9BQ90 382 aa10.84□□□□□ -0.67
HDAC8-201ENST00000373554 LAT2Q9GZY6 243 aa10.84□□□□□ -0.67
HDAC8-201ENST00000373554 QRSL1Q9H0R6 528 aaKnown RBP10.84□□□□□ -0.67
HDAC8-201ENST00000373554 MTHFD2LQ9H903 347 aaPredicted RBP10.84□□□□□ -0.67
HDAC8-201ENST00000373554 VAPAQ9P0L0 249 aa10.84□□□□□ -0.67
HDAC8-201ENST00000373554 SLAMF8Q9P0V8 285 aa10.84□□□□□ -0.67
HDAC8-201ENST00000373554 CLCF1Q9UBD9 225 aa10.84□□□□□ -0.67
HDAC8-201ENST00000373554 ABCA12Q86UK0 2595 aa10.84□□□□□ -0.67
HDAC8-201ENST00000373554 PCNX1Q96RV3 2341 aa10.84□□□□□ -0.67
HDAC8-201ENST00000373554 TRBV5-3A0A0A0MS03 114 aa10.83□□□□□ -0.68
HDAC8-201ENST00000373554 NKX2-6A6NCS4 301 aa10.83□□□□□ -0.68
HDAC8-201ENST00000373554 SLC22A20A6NK97 555 aa10.83□□□□□ -0.68
HDAC8-201ENST00000373554 C5orf58C9J3I9 102 aa10.83□□□□□ -0.68
HDAC8-201ENST00000373554 DYNC1I1O14576 645 aa10.83□□□□□ -0.68
HDAC8-201ENST00000373554 EIF1AYO14602 144 aaKnown RBP10.83□□□□□ -0.68
HDAC8-201ENST00000373554 TFPTP0C1Z6 253 aa10.83□□□□□ -0.68
HDAC8-201ENST00000373554 TMIGD3P0DMS9 266 aaPredicted RBP10.83□□□□□ -0.68
HDAC8-201ENST00000373554 FCGR2AP12318 317 aa10.83□□□□□ -0.68
HDAC8-201ENST00000373554 BMP2P12643 396 aa10.83□□□□□ -0.68
HDAC8-201ENST00000373554 NID1P14543 1247 aa10.83□□□□□ -0.68
HDAC8-201ENST00000373554 IL7RP16871 459 aa10.83□□□□□ -0.68
HDAC8-201ENST00000373554 PRKCAP17252 672 aa10.83□□□□□ -0.68
HDAC8-201ENST00000373554 PGCP20142 388 aa10.83□□□□□ -0.68
HDAC8-201ENST00000373554 BMP5P22003 454 aa10.83□□□□□ -0.68
HDAC8-201ENST00000373554 RPS4Y1P22090 263 aaKnown RBP10.83□□□□□ -0.68
HDAC8-201ENST00000373554 PSMA4P25789 261 aaKnown RBP10.83□□□□□ -0.68
HDAC8-201ENST00000373554 PGM1P36871 562 aa10.83□□□□□ -0.68
HDAC8-201ENST00000373554 SLC6A8P48029 635 aa10.83□□□□□ -0.68
HDAC8-201ENST00000373554 SUCLG1P53597 346 aaKnown RBP10.83□□□□□ -0.68
HDAC8-201ENST00000373554 RAC1P63000 192 aa10.83□□□□□ -0.68
HDAC8-201ENST00000373554 QPRTQ15274 297 aa10.83□□□□□ -0.68
HDAC8-201ENST00000373554 MAPRE2Q15555 327 aa10.83□□□□□ -0.68
HDAC8-201ENST00000373554 SGCBQ16585 318 aa10.83□□□□□ -0.68
HDAC8-201ENST00000373554 LIN52Q52LA3 116 aa10.83□□□□□ -0.68
HDAC8-201ENST00000373554 GCNT6Q5T4J0 391 aa10.83□□□□□ -0.68
HDAC8-201ENST00000373554 SP5Q6BEB4 398 aaPredicted RBP10.83□□□□□ -0.68
HDAC8-201ENST00000373554 GGNQ86UU5 652 aa10.83□□□□□ -0.68
HDAC8-201ENST00000373554 MSRB3Q8IXL7 192 aa10.83□□□□□ -0.68
HDAC8-201ENST00000373554 METTL25Q8N6Q8 603 aa10.83□□□□□ -0.68
HDAC8-201ENST00000373554 C9orf106Q8NAJ2 232 aa10.83□□□□□ -0.68
HDAC8-201ENST00000373554 FAM71CQ8NEG0 241 aa10.83□□□□□ -0.68
HDAC8-201ENST00000373554 FBXO27Q8NI29 283 aa10.83□□□□□ -0.68
HDAC8-201ENST00000373554 POC1BQ8TC44 478 aa10.83□□□□□ -0.68
HDAC8-201ENST00000373554 GPR119Q8TDV5 335 aa10.83□□□□□ -0.68
HDAC8-201ENST00000373554 TMEM234Q8WY98 164 aa10.83□□□□□ -0.68
HDAC8-201ENST00000373554 ST8SIA1Q92185 356 aa10.83□□□□□ -0.68
HDAC8-201ENST00000373554 ZG16BQ96DA0 208 aa10.83□□□□□ -0.68
HDAC8-201ENST00000373554 TMEM19Q96HH6 336 aa10.83□□□□□ -0.68
HDAC8-201ENST00000373554 MRGPRX4Q96LA9 322 aa10.83□□□□□ -0.68
HDAC8-201ENST00000373554 ZNF317Q96PQ6 595 aaPredicted RBP10.83□□□□□ -0.68
HDAC8-201ENST00000373554 UCN2Q96RP3 112 aa10.83□□□□□ -0.68
HDAC8-201ENST00000373554 NPAS1Q99742 590 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms