RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 ACBD7Q8N6N7 88 aa26.77■■□□□ 1.88
SSBP3-204ENST00000371320 FAM181AQ8N9Y4 354 aa26.77■■□□□ 1.88
SSBP3-204ENST00000371320 AVL9Q8NBF6 648 aa26.77■■□□□ 1.88
SSBP3-204ENST00000371320 DCLRE1CQ96SD1 692 aaKnown RBP26.77■■□□□ 1.88
SSBP3-204ENST00000371320 EVA1AQ9H8M9 152 aa26.77■■□□□ 1.88
SSBP3-204ENST00000371320 FOLH1BQ9HBA9 442 aa26.77■■□□□ 1.88
SSBP3-204ENST00000371320 SIGLEC7Q9Y286 467 aa26.77■■□□□ 1.88
SSBP3-204ENST00000371320 A0A0A6YYC8 382 aaPredicted RBP26.76■■□□□ 1.87
SSBP3-204ENST00000371320 ZC3H12DA2A288 527 aaKnown RBP26.76■■□□□ 1.87
SSBP3-204ENST00000371320 I3L1I5 382 aaPredicted RBP26.76■■□□□ 1.87
SSBP3-204ENST00000371320 ATP6V1G1O75348 118 aa26.76■■□□□ 1.87
SSBP3-204ENST00000371320 CAV3P56539 151 aa26.76■■□□□ 1.87
SSBP3-204ENST00000371320 PRPF38BQ5VTL8 546 aaKnown RBP26.76■■□□□ 1.87
SSBP3-204ENST00000371320 XKRXQ6PP77 449 aa26.76■■□□□ 1.87
SSBP3-204ENST00000371320 THSD4Q6ZMP0 1018 aa26.76■■□□□ 1.87
SSBP3-204ENST00000371320 MARCH9Q86YJ5 346 aa26.76■■□□□ 1.87
SSBP3-204ENST00000371320 ATP6V1C2Q8NEY4 427 aa26.76■■□□□ 1.87
SSBP3-204ENST00000371320 FAM210AQ96ND0 272 aa26.76■■□□□ 1.87
SSBP3-204ENST00000371320 LMF2Q9BU23 707 aaKnown RBP26.76■■□□□ 1.87
SSBP3-204ENST00000371320 MEPEQ9NQ76 525 aaPredicted RBP26.76■■□□□ 1.87
SSBP3-204ENST00000371320 CMC2Q9NRP2 79 aa26.76■■□□□ 1.87
SSBP3-204ENST00000371320 HCN3Q9P1Z3 774 aa26.76■■□□□ 1.87
SSBP3-204ENST00000371320 PCDHGB2Q9Y5G2 931 aa26.76■■□□□ 1.87
SSBP3-204ENST00000371320 SYNDIG1LA6NDD5 238 aa26.75■■□□□ 1.87
SSBP3-204ENST00000371320 SLC9B1P1A6NJY1 282 aa26.75■■□□□ 1.87
SSBP3-204ENST00000371320 C12orf71A8MTZ7 269 aa26.75■■□□□ 1.87
SSBP3-204ENST00000371320 CTBP2P56545 445 aa26.75■■□□□ 1.87
SSBP3-204ENST00000371320 FOXK2Q01167 660 aa26.75■■□□□ 1.87
SSBP3-204ENST00000371320 NRARPQ7Z6K4 114 aa26.75■■□□□ 1.87
SSBP3-204ENST00000371320 PARGQ86W56 976 aa26.75■■□□□ 1.87
SSBP3-204ENST00000371320 RIT1Q92963 219 aa26.75■■□□□ 1.87
SSBP3-204ENST00000371320 KLHDC7BQ96G42 594 aa26.75■■□□□ 1.87
SSBP3-204ENST00000371320 ASB6Q9NWX5 421 aa26.75■■□□□ 1.87
SSBP3-204ENST00000371320 A0A0B4J2E0 115 aa26.75■■□□□ 1.87
SSBP3-204ENST00000371320 A0A1B0GX12 115 aa26.75■■□□□ 1.87
SSBP3-204ENST00000371320 GABRPO00591 440 aa26.75■■□□□ 1.87
SSBP3-204ENST00000371320 CHP2O43745 196 aa26.75■■□□□ 1.87
SSBP3-204ENST00000371320 GLULP15104 373 aa26.75■■□□□ 1.87
SSBP3-204ENST00000371320 STX4Q12846 297 aa26.75■■□□□ 1.87
SSBP3-204ENST00000371320 KLHL12Q53G59 568 aa26.75■■□□□ 1.87
SSBP3-204ENST00000371320 IL17RDQ8NFM7 739 aa26.75■■□□□ 1.87
SSBP3-204ENST00000371320 RBM18Q96H35 190 aaKnown RBP26.75■■□□□ 1.87
SSBP3-204ENST00000371320 HCAR1Q9BXC0 346 aa26.75■■□□□ 1.87
SSBP3-204ENST00000371320 ISG20L2Q9H9L3 353 aaKnown RBP26.75■■□□□ 1.87
SSBP3-204ENST00000371320 FLRT3Q9NZU0 649 aa26.75■■□□□ 1.87
SSBP3-204ENST00000371320 RNH1P13489 461 aaKnown RBP26.74■■□□□ 1.87
SSBP3-204ENST00000371320 EMDP50402 254 aa26.74■■□□□ 1.87
SSBP3-204ENST00000371320 OR4N2Q8NGD1 307 aa26.74■■□□□ 1.87
SSBP3-204ENST00000371320 PTCHD1Q96NR3 888 aa26.74■■□□□ 1.87
SSBP3-204ENST00000371320 PHOX2BQ99453 314 aa26.74■■□□□ 1.87
SSBP3-204ENST00000371320 WSB2Q9NYS7 404 aaPredicted RBP26.74■■□□□ 1.87
SSBP3-204ENST00000371320 SLCO1B1Q9Y6L6 691 aa26.74■■□□□ 1.87
SSBP3-204ENST00000371320 TRAV27A0A087WT01 109 aa26.74■■□□□ 1.87
SSBP3-204ENST00000371320 A0A1B0GWA3 101 aa26.74■■□□□ 1.87
SSBP3-204ENST00000371320 A0A1W2PQ09 198 aa26.74■■□□□ 1.87
SSBP3-204ENST00000371320 PRR23D1E9PI22 279 aaPredicted RBP26.74■■□□□ 1.87
SSBP3-204ENST00000371320 HCN1O60741 890 aa26.74■■□□□ 1.87
SSBP3-204ENST00000371320 RFPL3O75679 317 aa26.74■■□□□ 1.87
SSBP3-204ENST00000371320 PRR23D2P0DMB1 279 aaPredicted RBP26.74■■□□□ 1.87
SSBP3-204ENST00000371320 SCN1BQ07699 218 aa26.74■■□□□ 1.87
SSBP3-204ENST00000371320 SRSF5Q13243 272 aaKnown RBP26.74■■□□□ 1.87
SSBP3-204ENST00000371320 FZD5Q13467 585 aa26.74■■□□□ 1.87
SSBP3-204ENST00000371320 PRTGQ2VWP7 1150 aa26.74■■□□□ 1.87
SSBP3-204ENST00000371320 GRAMD2AQ8IUY3 354 aa26.74■■□□□ 1.87
SSBP3-204ENST00000371320 TMEM99Q8N816 258 aa26.74■■□□□ 1.87
SSBP3-204ENST00000371320 SLC37A3Q8NCC5 494 aa26.74■■□□□ 1.87
SSBP3-204ENST00000371320 OR51A7Q8NH64 312 aa26.74■■□□□ 1.87
SSBP3-204ENST00000371320 NEIL3Q8TAT5 605 aa26.74■■□□□ 1.87
SSBP3-204ENST00000371320 DNAJA4Q8WW22 397 aaPredicted RBP26.74■■□□□ 1.87
SSBP3-204ENST00000371320 LRRC61Q9BV99 259 aa26.74■■□□□ 1.87
SSBP3-204ENST00000371320 ALG8Q9BVK2 526 aa26.74■■□□□ 1.87
SSBP3-204ENST00000371320 A0A1W2PPC4 97 aa26.73■■□□□ 1.87
SSBP3-204ENST00000371320 TMCC2O75069 709 aa26.73■■□□□ 1.87
SSBP3-204ENST00000371320 IGKV1D-16P01601 117 aa26.73■■□□□ 1.87
SSBP3-204ENST00000371320 GAAP10253 952 aa26.73■■□□□ 1.87
SSBP3-204ENST00000371320 CASP3P42574 277 aa26.73■■□□□ 1.87
SSBP3-204ENST00000371320 VASNQ6EMK4 673 aa26.73■■□□□ 1.87
SSBP3-204ENST00000371320 GATAD2AQ86YP4 633 aa26.73■■□□□ 1.87
SSBP3-204ENST00000371320 PTP4A1Q93096 173 aa26.73■■□□□ 1.87
SSBP3-204ENST00000371320 PEX11GQ96HA9 241 aa26.73■■□□□ 1.87
SSBP3-204ENST00000371320 TBX5Q99593 518 aa26.73■■□□□ 1.87
SSBP3-204ENST00000371320 DNAJB12Q9NXW2 375 aaKnown RBP26.73■■□□□ 1.87
SSBP3-204ENST00000371320 BRWD1Q9NSI6 2320 aa26.72■■□□□ 1.87
SSBP3-204ENST00000371320 SSTR4P31391 388 aa26.72■■□□□ 1.87
SSBP3-204ENST00000371320 MAZP56270 477 aaKnown RBP26.72■■□□□ 1.87
SSBP3-204ENST00000371320 RPS7P62081 194 aaKnown RBP26.72■■□□□ 1.87
SSBP3-204ENST00000371320 BDH1Q02338 343 aa26.72■■□□□ 1.87
SSBP3-204ENST00000371320 GDPD1Q8N9F7 314 aa26.72■■□□□ 1.87
SSBP3-204ENST00000371320 TRIM2Q9C040 744 aa26.72■■□□□ 1.87
SSBP3-204ENST00000371320 BABAM2Q9NXR7 383 aa26.72■■□□□ 1.87
SSBP3-204ENST00000371320 COMMD3Q9UBI1 195 aa26.72■■□□□ 1.87
SSBP3-204ENST00000371320 MRPS33Q9Y291 106 aaKnown RBP26.72■■□□□ 1.87
SSBP3-204ENST00000371320 DAPL1A0PJW8 107 aa26.72■■□□□ 1.87
SSBP3-204ENST00000371320 CD8B2A6NJW9 211 aa26.72■■□□□ 1.87
SSBP3-204ENST00000371320 SLC22A31A6NKX4 558 aa26.72■■□□□ 1.87
SSBP3-204ENST00000371320 TGFBR3LH3BV60 316 aa26.72■■□□□ 1.87
SSBP3-204ENST00000371320 PTP4A3O75365 173 aa26.72■■□□□ 1.87
SSBP3-204ENST00000371320 CDC123O75794 336 aaPredicted RBP26.72■■□□□ 1.87
SSBP3-204ENST00000371320 CD8BP10966 210 aa26.72■■□□□ 1.87
SSBP3-204ENST00000371320 SKP1P63208 163 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms