RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 MPDZO75970 2070 aa18.87■□□□□ 0.61
SHISA4-201ENST00000362011 TLN1Q9Y490 2541 aaKnown RBP18.86■□□□□ 0.61
SHISA4-201ENST00000362011 J3KTA2 159 aa18.86■□□□□ 0.61
SHISA4-201ENST00000362011 EIF4E2O60573 245 aaKnown RBP18.86■□□□□ 0.61
SHISA4-201ENST00000362011 GKN3PP0CG01 181 aa18.86■□□□□ 0.61
SHISA4-201ENST00000362011 YAP1P46937 504 aaKnown RBP18.86■□□□□ 0.61
SHISA4-201ENST00000362011 CYB561P49447 251 aa18.86■□□□□ 0.61
SHISA4-201ENST00000362011 CCL11P51671 97 aa18.86■□□□□ 0.61
SHISA4-201ENST00000362011 ZNF136P52737 540 aa18.86■□□□□ 0.61
SHISA4-201ENST00000362011 SESN3P58005 492 aa18.86■□□□□ 0.61
SHISA4-201ENST00000362011 TBR1Q16650 682 aa18.86■□□□□ 0.61
SHISA4-201ENST00000362011 ZNF468Q5VIY5 522 aaPredicted RBP18.86■□□□□ 0.61
SHISA4-201ENST00000362011 SLC22A10Q63ZE4 541 aa18.86■□□□□ 0.61
SHISA4-201ENST00000362011 ISLR2Q6UXK2 745 aa18.86■□□□□ 0.61
SHISA4-201ENST00000362011 TMCO5AQ8N6Q1 288 aa18.86■□□□□ 0.61
SHISA4-201ENST00000362011 PAQR8Q8TEZ7 354 aa18.86■□□□□ 0.61
SHISA4-201ENST00000362011 NR4A3Q92570 626 aa18.86■□□□□ 0.61
SHISA4-201ENST00000362011 SGCZQ96LD1 299 aa18.86■□□□□ 0.61
SHISA4-201ENST00000362011 MCHR1Q99705 422 aa18.86■□□□□ 0.61
SHISA4-201ENST00000362011 BDH2Q9BUT1 245 aa18.86■□□□□ 0.61
SHISA4-201ENST00000362011 RTN4RQ9BZR6 473 aa18.86■□□□□ 0.61
SHISA4-201ENST00000362011 LAT2Q9GZY6 243 aa18.86■□□□□ 0.61
SHISA4-201ENST00000362011 SDHAF3Q9NRP4 125 aa18.86■□□□□ 0.61
SHISA4-201ENST00000362011 CNOT11Q9UKZ1 510 aaKnown RBP18.86■□□□□ 0.61
SHISA4-201ENST00000362011 KCNMB2Q9Y691 235 aa18.86■□□□□ 0.61
SHISA4-201ENST00000362011 FAM87AP0C7U9 286 aa18.85■□□□□ 0.61
SHISA4-201ENST00000362011 PTGDSP41222 190 aa18.85■□□□□ 0.61
SHISA4-201ENST00000362011 CASP3P42574 277 aa18.85■□□□□ 0.61
SHISA4-201ENST00000362011 OC90Q02509 493 aaPredicted RBP18.85■□□□□ 0.61
SHISA4-201ENST00000362011 SKP2Q13309 424 aa18.85■□□□□ 0.61
SHISA4-201ENST00000362011 SNTA1Q13424 505 aa18.85■□□□□ 0.61
SHISA4-201ENST00000362011 RAPSNQ13702 412 aa18.85■□□□□ 0.61
SHISA4-201ENST00000362011 SLC30A6Q6NXT4 461 aa18.85■□□□□ 0.61
SHISA4-201ENST00000362011 LINC00696Q6ZRV3 163 aa18.85■□□□□ 0.61
SHISA4-201ENST00000362011 CENPNQ96H22 339 aaPredicted RBP18.85■□□□□ 0.61
SHISA4-201ENST00000362011 PRRC1Q96M27 445 aa18.85■□□□□ 0.61
SHISA4-201ENST00000362011 PIP5K1AQ99755 562 aa18.85■□□□□ 0.61
SHISA4-201ENST00000362011 ZNF559Q9BR84 538 aa18.85■□□□□ 0.61
SHISA4-201ENST00000362011 ARHGAP9Q9BRR9 750 aa18.85■□□□□ 0.61
SHISA4-201ENST00000362011 UTP23Q9BRU9 249 aaKnown RBP18.85■□□□□ 0.61
SHISA4-201ENST00000362011 POLR2J2Q9GZM3 115 aaKnown RBP18.85■□□□□ 0.61
SHISA4-201ENST00000362011 POLR2J3Q9H1A7 115 aaKnown RBP18.85■□□□□ 0.61
SHISA4-201ENST00000362011 SEMA6AQ9H2E6 1030 aa18.85■□□□□ 0.61
SHISA4-201ENST00000362011 HHATLQ9HCP6 504 aa18.85■□□□□ 0.61
SHISA4-201ENST00000362011 ANKRD10Q9NXR5 420 aa18.85■□□□□ 0.61
SHISA4-201ENST00000362011 CNIH4Q9P003 139 aa18.85■□□□□ 0.61
SHISA4-201ENST00000362011 CARD8Q9Y2G2 431 aa18.85■□□□□ 0.61
SHISA4-201ENST00000362011 NCKAP5O14513 1909 aa18.85■□□□□ 0.61
SHISA4-201ENST00000362011 FREM3P0C091 2139 aa18.85■□□□□ 0.61
SHISA4-201ENST00000362011 ADAM10O14672 748 aa18.84■□□□□ 0.61
SHISA4-201ENST00000362011 ADAMDEC1O15204 470 aa18.84■□□□□ 0.61
SHISA4-201ENST00000362011 OIP5O43482 229 aa18.84■□□□□ 0.61
SHISA4-201ENST00000362011 DPM1O60762 260 aa18.84■□□□□ 0.61
SHISA4-201ENST00000362011 FMO6PO60774 539 aa18.84■□□□□ 0.61
SHISA4-201ENST00000362011 CCL3P10147 92 aa18.84■□□□□ 0.61
SHISA4-201ENST00000362011 PRG2P13727 222 aa18.84■□□□□ 0.61
SHISA4-201ENST00000362011 RRM2P31350 389 aa18.84■□□□□ 0.61
SHISA4-201ENST00000362011 IFNA8P32881 189 aa18.84■□□□□ 0.61
SHISA4-201ENST00000362011 GAS1P54826 345 aa18.84■□□□□ 0.61
SHISA4-201ENST00000362011 TAS2R41P59536 307 aa18.84■□□□□ 0.61
SHISA4-201ENST00000362011 HOXC5Q00444 222 aa18.84■□□□□ 0.61
SHISA4-201ENST00000362011 SPIBQ01892 262 aa18.84■□□□□ 0.61
SHISA4-201ENST00000362011 ZNF117Q03924 483 aa18.84■□□□□ 0.61
SHISA4-201ENST00000362011 C17orf67Q0P5P2 114 aa18.84■□□□□ 0.61
SHISA4-201ENST00000362011 EPS8Q12929 822 aa18.84■□□□□ 0.61
SHISA4-201ENST00000362011 MFAP5Q13361 173 aa18.84■□□□□ 0.61
SHISA4-201ENST00000362011 TUBA3CQ13748 450 aa18.84■□□□□ 0.61
SHISA4-201ENST00000362011 SNCBQ16143 134 aa18.84■□□□□ 0.61
SHISA4-201ENST00000362011 ENTPD8Q5MY95 495 aa18.84■□□□□ 0.61
SHISA4-201ENST00000362011 BICRALQ6AI39 1079 aa18.84■□□□□ 0.61
SHISA4-201ENST00000362011 TUBA3EQ6PEY2 450 aa18.84■□□□□ 0.61
SHISA4-201ENST00000362011 PLEKHM3Q6ZWE6 761 aa18.84■□□□□ 0.61
SHISA4-201ENST00000362011 PHF10Q8WUB8 498 aaKnown RBP18.84■□□□□ 0.61
SHISA4-201ENST00000362011 ZNF552Q9H707 407 aaPredicted RBP18.84■□□□□ 0.61
SHISA4-201ENST00000362011 REEP1Q9H902 201 aa18.84■□□□□ 0.61
SHISA4-201ENST00000362011 SH2D2AQ9NP31 389 aa18.84■□□□□ 0.61
SHISA4-201ENST00000362011 PPP4R1LQ9P1A2 415 aa18.84■□□□□ 0.61
SHISA4-201ENST00000362011 ACAD8Q9UKU7 415 aa18.84■□□□□ 0.61
SHISA4-201ENST00000362011 TESMINQ9Y4I5 508 aa18.84■□□□□ 0.61
SHISA4-201ENST00000362011 WIF1Q9Y5W5 379 aa18.84■□□□□ 0.61
SHISA4-201ENST00000362011 PTPN13Q12923 2485 aa18.84■□□□□ 0.61
SHISA4-201ENST00000362011 CPSF4LA6NMK7 179 aaKnown RBP18.83■□□□□ 0.61
SHISA4-201ENST00000362011 HCRTR2O43614 444 aa18.83■□□□□ 0.61
SHISA4-201ENST00000362011 TPST2O60704 377 aa18.83■□□□□ 0.61
SHISA4-201ENST00000362011 PRSS23O95084 383 aa18.83■□□□□ 0.61
SHISA4-201ENST00000362011 P04436 131 aa18.83■□□□□ 0.61
SHISA4-201ENST00000362011 ACAA2P42765 397 aaKnown RBP18.83■□□□□ 0.61
SHISA4-201ENST00000362011 SLC6A8P48029 635 aa18.83■□□□□ 0.61
SHISA4-201ENST00000362011 P2RX1P51575 399 aa18.83■□□□□ 0.61
SHISA4-201ENST00000362011 CCR4P51679 360 aa18.83■□□□□ 0.61
SHISA4-201ENST00000362011 GANABQ14697 944 aaKnown RBP18.83■□□□□ 0.61
SHISA4-201ENST00000362011 PRAMEF20Q5VT98 475 aa18.83■□□□□ 0.61
SHISA4-201ENST00000362011 ICA1LQ8NDH6 482 aa18.83■□□□□ 0.61
SHISA4-201ENST00000362011 B4GALNT2Q8NHY0 566 aa18.83■□□□□ 0.61
SHISA4-201ENST00000362011 DUSP19Q8WTR2 217 aa18.83■□□□□ 0.61
SHISA4-201ENST00000362011 SH3YL1Q96HL8 342 aaPredicted RBP18.83■□□□□ 0.61
SHISA4-201ENST00000362011 GALNT9Q9HCQ5 603 aa18.83■□□□□ 0.61
SHISA4-201ENST00000362011 CTPS2Q9NRF8 586 aa18.83■□□□□ 0.61
SHISA4-201ENST00000362011 SACM1LQ9NTJ5 587 aa18.83■□□□□ 0.61
SHISA4-201ENST00000362011 LRFN1Q9P244 771 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms