RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 TMEM185BQ9H7F4 350 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 USP36Q9P275 1121 aaKnown RBP12.6□□□□□ -0.39
LDB3-202ENST00000361373 ICKQ9UPZ9 632 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 FXYD6-FXYD2A0A087WZ82 144 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 PIGFQ07326 219 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 PGGHGQ32M88 737 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 BCL7CQ8WUZ0 217 aaPredicted RBP12.6□□□□□ -0.39
LDB3-202ENST00000361373 FXYD6Q9H0Q3 95 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 PCED1AQ9H1Q7 454 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 ABCG2Q9UNQ0 655 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 LOC102723532A0A0G2JNH3 316 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 A0A1B0GX78 115 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 SMIM30A4D0T7 59 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 A6NL46 340 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 GNRHRP30968 328 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 EIF1P41567 113 aaKnown RBP12.6□□□□□ -0.39
LDB3-202ENST00000361373 PFN3P60673 137 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 ATAD3CQ5T2N8 411 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 PAPD4Q6PIY7 484 aaKnown RBP12.6□□□□□ -0.39
LDB3-202ENST00000361373 MFSD8Q8NHS3 518 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 SLC37A2Q8TED4 501 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 ZNF597Q96LX8 424 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 LAMA4Q16363 1823 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 NPIPA5A0A0B4J1W7 369 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 PRRT4C9JH25 899 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 NPIPA7E9PJI5 369 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 SCGB1D2O95969 90 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 NPIPA8P0DM63 369 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 TACR1P25103 407 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 EXT1Q16394 746 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 BPHLQ86WA6 291 aaPredicted RBP12.59□□□□□ -0.39
LDB3-202ENST00000361373 CYB561A3Q8NBI2 242 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 CHTF18Q8WVB6 975 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 ATOH1Q92858 354 aaPredicted RBP12.59□□□□□ -0.39
LDB3-202ENST00000361373 ZMYND19Q96E35 227 aaPredicted RBP12.59□□□□□ -0.39
LDB3-202ENST00000361373 PLEK2Q9NYT0 353 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 SERINC4A6NH21 518 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 H7C417 338 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 EEF1E1O43324 174 aaKnown RBP12.59□□□□□ -0.39
LDB3-202ENST00000361373 POLR2HP52434 150 aaKnown RBP12.59□□□□□ -0.39
LDB3-202ENST00000361373 MRPL2Q5T653 305 aaKnown RBP12.59□□□□□ -0.39
LDB3-202ENST00000361373 CGB2Q6NT52 195 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 VRK3Q8IV63 474 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 CASTOR1Q8WTX7 329 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 NECAB3Q96P71 396 aaPredicted RBP12.59□□□□□ -0.39
LDB3-202ENST00000361373 PHOX2BQ99453 314 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 CDC6Q99741 560 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 LIN28AQ9H9Z2 209 aaKnown RBP12.59□□□□□ -0.39
LDB3-202ENST00000361373 UCKL1Q9NWZ5 548 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 ATXN7L1Q9ULK2 861 aaPredicted RBP12.59□□□□□ -0.39
LDB3-202ENST00000361373 ASB4Q9Y574 426 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 GFYI3L273 518 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 HCRTR1O43613 425 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 SCGB2A1O75556 95 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 S100A6P06703 90 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 EEF1A1P68104 462 aaKnown RBP12.59□□□□□ -0.39
LDB3-202ENST00000361373 ARSJQ5FYB0 599 aaPredicted RBP12.59□□□□□ -0.39
LDB3-202ENST00000361373 OTUD1Q5VV17 481 aaPredicted RBP12.59□□□□□ -0.39
LDB3-202ENST00000361373 SLC22A10Q63ZE4 541 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 IL20RBQ6UXL0 311 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 KCTD9Q7L273 389 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 SYT14Q8NB59 555 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 TM4SF18Q96CE8 201 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 CORINQ9Y5Q5 1042 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 WIF1Q9Y5W5 379 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 CSNK1G3Q9Y6M4 447 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 LOC100509620A0A075B734 347 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 A0A1W2PPK0 400 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 ZNF701M0R085 212 aaPredicted RBP12.59□□□□□ -0.39
LDB3-202ENST00000361373 PRKAR1BP31321 381 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 CHRNEQ04844 493 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 ZP2Q05996 745 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 GNMTQ14749 295 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 CCNJQ5T5M9 372 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 VRK2Q86Y07 508 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 FBXO27Q8NI29 283 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 TMEM163Q8TC26 289 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 FOXRED1Q96CU9 486 aaPredicted RBP12.59□□□□□ -0.39
LDB3-202ENST00000361373 PDXPQ96GD0 296 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 SYT3Q9BQG1 590 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 DNTTIP1Q9H147 329 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 ANKRD19PQ9H560 264 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 CD93Q9NPY3 652 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 KLHL13Q9P2N7 655 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 IL20RAQ9UHF4 553 aa12.59□□□□□ -0.39
LDB3-202ENST00000361373 INTS6Q9UL03 887 aaKnown RBP12.59□□□□□ -0.39
LDB3-202ENST00000361373 ZNF850A8MQ14 1090 aa12.58□□□□□ -0.4
LDB3-202ENST00000361373 M0R129 80 aa12.58□□□□□ -0.4
LDB3-202ENST00000361373 MAS1P04201 325 aa12.58□□□□□ -0.4
LDB3-202ENST00000361373 LCN1P31025 176 aa12.58□□□□□ -0.4
LDB3-202ENST00000361373 ERVK-25P63136 954 aa12.58□□□□□ -0.4
LDB3-202ENST00000361373 CDNFQ49AH0 187 aa12.58□□□□□ -0.4
LDB3-202ENST00000361373 TMEM31Q5JXX7 168 aa12.58□□□□□ -0.4
LDB3-202ENST00000361373 ZNF709Q8N972 641 aa12.58□□□□□ -0.4
LDB3-202ENST00000361373 ZFP90Q8TF47 636 aa12.58□□□□□ -0.4
LDB3-202ENST00000361373 TFAP2CQ92754 450 aa12.58□□□□□ -0.4
LDB3-202ENST00000361373 ABCG5Q9H222 651 aa12.58□□□□□ -0.4
LDB3-202ENST00000361373 A4GALTQ9NPC4 353 aa12.58□□□□□ -0.4
LDB3-202ENST00000361373 ADAM18Q9Y3Q7 739 aa12.58□□□□□ -0.4
LDB3-202ENST00000361373 ZNF175Q9Y473 711 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms