RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 TCTN2Q96GX1 697 aa20.93■□□□□ 0.94
LDB1-201ENST00000361198 EXOSC1Q9Y3B2 195 aaKnown RBP20.93■□□□□ 0.94
LDB1-201ENST00000361198 SPAG17Q6Q759 2223 aa20.92■□□□□ 0.94
LDB1-201ENST00000361198 OR2W5A6NFC9 320 aa20.92■□□□□ 0.94
LDB1-201ENST00000361198 HRKO00198 91 aa20.92■□□□□ 0.94
LDB1-201ENST00000361198 RNH1P13489 461 aaKnown RBP20.92■□□□□ 0.94
LDB1-201ENST00000361198 AZGP1P25311 298 aaKnown RBP20.92■□□□□ 0.94
LDB1-201ENST00000361198 FGF9P31371 208 aaPredicted RBP20.92■□□□□ 0.94
LDB1-201ENST00000361198 SDC2P34741 201 aa20.92■□□□□ 0.94
LDB1-201ENST00000361198 QSOX2Q6ZRP7 698 aa20.92■□□□□ 0.94
LDB1-201ENST00000361198 GDPD1Q8N9F7 314 aa20.92■□□□□ 0.94
LDB1-201ENST00000361198 FOXQ1Q9C009 403 aa20.92■□□□□ 0.94
LDB1-201ENST00000361198 N6AMT1Q9Y5N5 214 aa20.92■□□□□ 0.94
LDB1-201ENST00000361198 SLC30A4O14863 429 aa20.92■□□□□ 0.94
LDB1-201ENST00000361198 SURF4O15260 269 aa20.92■□□□□ 0.94
LDB1-201ENST00000361198 RPS5P46782 204 aaKnown RBP20.92■□□□□ 0.94
LDB1-201ENST00000361198 RPS25P62851 125 aaKnown RBP20.92■□□□□ 0.94
LDB1-201ENST00000361198 ATAD3CQ5T2N8 411 aa20.92■□□□□ 0.94
LDB1-201ENST00000361198 FAM131AQ6UXB0 335 aa20.92■□□□□ 0.94
LDB1-201ENST00000361198 KIAA1143Q96AT1 154 aaPredicted RBP20.92■□□□□ 0.94
LDB1-201ENST00000361198 ARHGAP9Q9BRR9 750 aa20.92■□□□□ 0.94
LDB1-201ENST00000361198 KATNB1Q9BVA0 655 aa20.92■□□□□ 0.94
LDB1-201ENST00000361198 PRRG3Q9BZD7 231 aa20.92■□□□□ 0.94
LDB1-201ENST00000361198 TP63Q9H3D4 680 aaPredicted RBP20.92■□□□□ 0.94
LDB1-201ENST00000361198 YARS2Q9Y2Z4 477 aaKnown RBP20.92■□□□□ 0.94
LDB1-201ENST00000361198 VCANP13611 3396 aa20.91■□□□□ 0.94
LDB1-201ENST00000361198 LIMS3P0CW19 117 aa20.91■□□□□ 0.94
LDB1-201ENST00000361198 LIMS4P0CW20 117 aa20.91■□□□□ 0.94
LDB1-201ENST00000361198 SSTR4P31391 388 aa20.91■□□□□ 0.94
LDB1-201ENST00000361198 GABRA5P31644 462 aa20.91■□□□□ 0.94
LDB1-201ENST00000361198 PPM1FP49593 454 aaPredicted RBP20.91■□□□□ 0.94
LDB1-201ENST00000361198 EMDP50402 254 aa20.91■□□□□ 0.94
LDB1-201ENST00000361198 STX4Q12846 297 aa20.91■□□□□ 0.94
LDB1-201ENST00000361198 DDI2Q5TDH0 399 aa20.91■□□□□ 0.94
LDB1-201ENST00000361198 SLC7A5P1Q8MH63 180 aa20.91■□□□□ 0.94
LDB1-201ENST00000361198 OR4N2Q8NGD1 307 aa20.91■□□□□ 0.94
LDB1-201ENST00000361198 CAPSLQ8WWF8 208 aa20.91■□□□□ 0.94
LDB1-201ENST00000361198 GATAD2BQ8WXI9 593 aa20.91■□□□□ 0.94
LDB1-201ENST00000361198 RIT1Q92963 219 aa20.91■□□□□ 0.94
LDB1-201ENST00000361198 TP53INP1Q96A56 240 aa20.91■□□□□ 0.94
LDB1-201ENST00000361198 C1GALT1C1Q96EU7 318 aa20.91■□□□□ 0.94
LDB1-201ENST00000361198 RBM18Q96H35 190 aaKnown RBP20.91■□□□□ 0.94
LDB1-201ENST00000361198 OR2B2Q9GZK3 357 aa20.91■□□□□ 0.94
LDB1-201ENST00000361198 SPEGQ15772 3267 aa20.91■□□□□ 0.94
LDB1-201ENST00000361198 FABP12A6NFH5 140 aa20.9■□□□□ 0.94
LDB1-201ENST00000361198 LYPD3O95274 346 aa20.9■□□□□ 0.94
LDB1-201ENST00000361198 TRAPPC2P0DI81 140 aa20.9■□□□□ 0.94
LDB1-201ENST00000361198 TRAPPC2BP0DI82 140 aa20.9■□□□□ 0.94
LDB1-201ENST00000361198 RCVRNP35243 200 aa20.9■□□□□ 0.94
LDB1-201ENST00000361198 DDOSTP39656 456 aa20.9■□□□□ 0.94
LDB1-201ENST00000361198 GFERP55789 205 aa20.9■□□□□ 0.94
LDB1-201ENST00000361198 RACK1P63244 317 aaKnown RBP20.9■□□□□ 0.94
LDB1-201ENST00000361198 BTG2P78543 158 aa20.9■□□□□ 0.94
LDB1-201ENST00000361198 SMAD2Q15796 467 aaKnown RBP20.9■□□□□ 0.94
LDB1-201ENST00000361198 Q8N9G6 341 aaPredicted RBP20.9■□□□□ 0.94
LDB1-201ENST00000361198 PFN4Q8NHR9 129 aa20.9■□□□□ 0.94
LDB1-201ENST00000361198 UFD1Q92890 307 aa20.9■□□□□ 0.94
LDB1-201ENST00000361198 ST6GAL2Q96JF0 529 aa20.9■□□□□ 0.94
LDB1-201ENST00000361198 SNX18Q96RF0 628 aa20.9■□□□□ 0.94
LDB1-201ENST00000361198 DPH1Q9BZG8 443 aa20.9■□□□□ 0.94
LDB1-201ENST00000361198 FOLH1BQ9HBA9 442 aa20.9■□□□□ 0.94
LDB1-201ENST00000361198 C20orf141Q9NUB4 165 aa20.9■□□□□ 0.94
LDB1-201ENST00000361198 CDH10Q9Y6N8 788 aa20.9■□□□□ 0.94
LDB1-201ENST00000361198 LILRA5A6NI73 299 aa20.9■□□□□ 0.94
LDB1-201ENST00000361198 HRO43593 1189 aa20.9■□□□□ 0.94
LDB1-201ENST00000361198 CSF3P09919 207 aa20.9■□□□□ 0.94
LDB1-201ENST00000361198 FUT1P19526 365 aa20.9■□□□□ 0.94
LDB1-201ENST00000361198 GABRA4P48169 554 aa20.9■□□□□ 0.94
LDB1-201ENST00000361198 DEFB133Q30KQ1 61 aa20.9■□□□□ 0.94
LDB1-201ENST00000361198 PGGHGQ32M88 737 aa20.9■□□□□ 0.94
LDB1-201ENST00000361198 SHFQ7M4L6 423 aa20.9■□□□□ 0.94
LDB1-201ENST00000361198 DIRAS2Q96HU8 199 aa20.9■□□□□ 0.94
LDB1-201ENST00000361198 SAMD8Q96LT4 415 aa20.9■□□□□ 0.94
LDB1-201ENST00000361198 SLC22A4Q9H015 551 aa20.9■□□□□ 0.94
LDB1-201ENST00000361198 UCK1Q9HA47 277 aa20.9■□□□□ 0.94
LDB1-201ENST00000361198 ZNF223Q9UK11 482 aaPredicted RBP20.9■□□□□ 0.94
LDB1-201ENST00000361198 DTX4Q9Y2E6 619 aa20.9■□□□□ 0.94
LDB1-201ENST00000361198 CLDN16Q9Y5I7 305 aa20.9■□□□□ 0.94
LDB1-201ENST00000361198 CTNSO60931 367 aa20.89■□□□□ 0.94
LDB1-201ENST00000361198 SLC2A10O95528 541 aa20.89■□□□□ 0.94
LDB1-201ENST00000361198 GAAP10253 952 aa20.89■□□□□ 0.94
LDB1-201ENST00000361198 S100A1P23297 94 aa20.89■□□□□ 0.94
LDB1-201ENST00000361198 CRTC2Q53ET0 693 aaPredicted RBP20.89■□□□□ 0.94
LDB1-201ENST00000361198 PDZK1Q5T2W1 519 aa20.89■□□□□ 0.94
LDB1-201ENST00000361198 METTL27Q8N6F8 245 aaPredicted RBP20.89■□□□□ 0.94
LDB1-201ENST00000361198 ZNF614Q8N883 585 aa20.89■□□□□ 0.94
LDB1-201ENST00000361198 PSD4Q8NDX1 1056 aa20.89■□□□□ 0.94
LDB1-201ENST00000361198 TMEM239Q8WW34 195 aa20.89■□□□□ 0.94
LDB1-201ENST00000361198 AP3S1Q92572 193 aa20.89■□□□□ 0.94
LDB1-201ENST00000361198 PMM1Q92871 262 aa20.89■□□□□ 0.94
LDB1-201ENST00000361198 TGM7Q96PF1 710 aa20.89■□□□□ 0.94
LDB1-201ENST00000361198 PHOX2BQ99453 314 aa20.89■□□□□ 0.94
LDB1-201ENST00000361198 LMF2Q9BU23 707 aaKnown RBP20.89■□□□□ 0.94
LDB1-201ENST00000361198 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.89■□□□□ 0.94
LDB1-201ENST00000361198 KRCC1Q9NPI7 259 aaPredicted RBP20.89■□□□□ 0.94
LDB1-201ENST00000361198 ATP13A2Q9NQ11 1180 aa20.89■□□□□ 0.94
LDB1-201ENST00000361198 POLE3Q9NRF9 147 aa20.89■□□□□ 0.94
LDB1-201ENST00000361198 GSTK1Q9Y2Q3 226 aa20.89■□□□□ 0.94
LDB1-201ENST00000361198 IGHV5-51A0A0C4DH38 117 aa20.89■□□□□ 0.93
LDB1-201ENST00000361198 MEIOCA2RUB1 952 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms