RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 RIT1Q92963 219 aa4.71□□□□□ -1.65
ATXN3-202ENST00000359366 TXNDC15Q96J42 360 aa4.71□□□□□ -1.65
ATXN3-202ENST00000359366 HS6ST2Q96MM7 605 aa4.71□□□□□ -1.65
ATXN3-202ENST00000359366 PTCHD1Q96NR3 888 aa4.71□□□□□ -1.65
ATXN3-202ENST00000359366 IL4I1Q96RQ9 567 aa4.71□□□□□ -1.65
ATXN3-202ENST00000359366 ZNF347Q96SE7 839 aa4.71□□□□□ -1.65
ATXN3-202ENST00000359366 NPLQ9BXD5 320 aaPredicted RBP4.71□□□□□ -1.65
ATXN3-202ENST00000359366 NRSN2Q9GZP1 204 aa4.71□□□□□ -1.65
ATXN3-202ENST00000359366 GABARAPL1Q9H0R8 117 aa4.71□□□□□ -1.65
ATXN3-202ENST00000359366 CXorf21Q9HAI6 301 aa4.71□□□□□ -1.65
ATXN3-202ENST00000359366 CUTCQ9NTM9 273 aa4.71□□□□□ -1.65
ATXN3-202ENST00000359366 SEMA4GQ9NTN9 838 aa4.71□□□□□ -1.65
ATXN3-202ENST00000359366 ZSCAN32Q9NX65 697 aa4.71□□□□□ -1.65
ATXN3-202ENST00000359366 CNIH4Q9P003 139 aa4.71□□□□□ -1.65
ATXN3-202ENST00000359366 CTSFQ9UBX1 484 aa4.71□□□□□ -1.65
ATXN3-202ENST00000359366 C19orf53Q9UNZ5 99 aaPredicted RBP4.71□□□□□ -1.65
ATXN3-202ENST00000359366 RNF6Q9Y252 685 aa4.71□□□□□ -1.65
ATXN3-202ENST00000359366 PCDHGA6Q9Y5G7 932 aa4.71□□□□□ -1.65
ATXN3-202ENST00000359366 CEPT1Q9Y6K0 416 aa4.71□□□□□ -1.65
ATXN3-202ENST00000359366 U3KQA8 63 aa4.71□□□□□ -1.65
ATXN3-202ENST00000359366 TNRC6BQ9UPQ9 1833 aaKnown RBP4.71□□□□□ -1.66
ATXN3-202ENST00000359366 RALGAPA1Q6GYQ0 2036 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 IGHV3-20A0A0C4DH32 117 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 A0A0G2JPF8 293 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 A0A1W2PQM1 296 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 EFCAB10A6NFE3 127 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 PCP4L1A6NKN8 68 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 HNRNPCL3B7ZW38 293 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 H3BUI4 141 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 CCRL2O00421 344 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 SLC16A6O15403 523 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 SRPX2O60687 465 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-202ENST00000359366 WBP4O75554 376 aaKnown RBP4.71□□□□□ -1.66
ATXN3-202ENST00000359366 CYP7B1O75881 506 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 PDE9AO76083 593 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 SNX4O95219 450 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 ANGPTL1O95841 491 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 LGI1O95970 557 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 THY1P04216 161 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 RPLP0P05388 317 aaKnown RBP4.71□□□□□ -1.66
ATXN3-202ENST00000359366 HNRNPCL4P0DMR1 293 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 TNNI3P19429 210 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 PCSK6P29122 969 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 EPHA8P29322 1005 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-202ENST00000359366 LIMS1P48059 325 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 EMDP50402 254 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 ARFIP1P53367 373 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 TAS2R41P59536 307 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 HSD11B2P80365 405 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 SIGLEC14Q08ET2 396 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 BAMBIQ13145 260 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 FAM53BQ14153 422 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 COLEC12Q5KU26 742 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 GPR107Q5VW38 600 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 ZNF770Q6IQ21 691 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-202ENST00000359366 NPSR1Q6W5P4 371 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 BBS10Q8TAM1 723 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 SAP25Q8TEE9 199 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 APH1BQ8WW43 257 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 EDAQ92838 391 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 DNAJA3Q96EY1 480 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 MAP6Q96JE9 813 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 TRNT1Q96Q11 434 aaKnown RBP4.71□□□□□ -1.66
ATXN3-202ENST00000359366 FNDC11Q9BVV2 318 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 OR8D2Q9GZM6 311 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 DSN1Q9H410 356 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 EGLN3Q9H6Z9 239 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 APMAPQ9HDC9 416 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 FGF21Q9NSA1 209 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 TAS2R16Q9NYV7 291 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 FLRT3Q9NZU0 649 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 TEKT2Q9UIF3 430 aa4.71□□□□□ -1.66
ATXN3-202ENST00000359366 NDRG4Q9ULP0 352 aaKnown RBP4.71□□□□□ -1.66
ATXN3-202ENST00000359366 ZNF443Q9Y2A4 671 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-202ENST00000359366 KLF2Q9Y5W3 355 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-202ENST00000359366 A0A087WXM4 84 aa4.7□□□□□ -1.66
ATXN3-202ENST00000359366 H3BMH7 237 aa4.7□□□□□ -1.66
ATXN3-202ENST00000359366 H3BN98 237 aa4.7□□□□□ -1.66
ATXN3-202ENST00000359366 TOR1AO14656 332 aa4.7□□□□□ -1.66
ATXN3-202ENST00000359366 NOS1APO75052 506 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-202ENST00000359366 INMTO95050 263 aa4.7□□□□□ -1.66
ATXN3-202ENST00000359366 BMP10O95393 424 aa4.7□□□□□ -1.66
ATXN3-202ENST00000359366 NSA2O95478 260 aaKnown RBP4.7□□□□□ -1.66
ATXN3-202ENST00000359366 FADS2O95864 444 aaKnown RBP4.7□□□□□ -1.66
ATXN3-202ENST00000359366 SLC35E2P0CK97 266 aa4.7□□□□□ -1.66
ATXN3-202ENST00000359366 ITGAMP11215 1152 aa4.7□□□□□ -1.66
ATXN3-202ENST00000359366 CBLP22681 906 aa4.7□□□□□ -1.66
ATXN3-202ENST00000359366 CHMP24386 653 aa4.7□□□□□ -1.66
ATXN3-202ENST00000359366 RYKP34925 604 aa4.7□□□□□ -1.66
ATXN3-202ENST00000359366 MASP1P48740 699 aa4.7□□□□□ -1.66
ATXN3-202ENST00000359366 STARP49675 285 aa4.7□□□□□ -1.66
ATXN3-202ENST00000359366 HLCSP50747 726 aa4.7□□□□□ -1.66
ATXN3-202ENST00000359366 RGS8P57771 180 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-202ENST00000359366 PSG6Q00889 435 aa4.7□□□□□ -1.66
ATXN3-202ENST00000359366 ALDH6A1Q02252 535 aaKnown RBP4.7□□□□□ -1.66
ATXN3-202ENST00000359366 PLAURQ03405 335 aa4.7□□□□□ -1.66
ATXN3-202ENST00000359366 RAB39AQ14964 217 aa4.7□□□□□ -1.66
ATXN3-202ENST00000359366 MAD2L1BPQ15013 274 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-202ENST00000359366 PTGES3Q15185 160 aaKnown RBP4.7□□□□□ -1.66
ATXN3-202ENST00000359366 NDUFA9Q16795 377 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms