RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 TMEM151BQ8IW70 566 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 LRRC56Q8IYG6 542 aaPredicted RBP12.11□□□□□ -0.47
SMC4-202ENST00000357388 ADGRG5Q8IZF4 528 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 NIPSNAP3BQ9BS92 247 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 OR11A1Q9GZK7 315 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 RNF39Q9H2S5 420 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 PIGMQ9H3S5 423 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 METTL17Q9H7H0 456 aaPredicted RBP12.11□□□□□ -0.47
SMC4-202ENST00000357388 HEMK1Q9Y5R4 338 aaPredicted RBP12.11□□□□□ -0.47
SMC4-202ENST00000357388 GLOD5A6NK44 160 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 MPPED1O15442 326 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 PPP1R3DO95685 299 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 SGSHP51688 502 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 NR0B1P51843 470 aaKnown RBP12.11□□□□□ -0.47
SMC4-202ENST00000357388 HSD17B7P56937 341 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 CDHR3Q6ZTQ4 885 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 CPOQ8IVL8 374 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 UEVLDQ8IX04 471 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 METTL27Q8N6F8 245 aaPredicted RBP12.11□□□□□ -0.47
SMC4-202ENST00000357388 OR5D14Q8NGL3 314 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 MARC2Q969Z3 335 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 SLC22A7Q9Y694 548 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 SPATA31D1Q6ZQQ2 1576 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 RNASET2O00584 256 aaKnown RBP12.11□□□□□ -0.47
SMC4-202ENST00000357388 HLA-HP01893 362 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 NTSR1P30989 418 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 NDUFA6P56556 154 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 MZT1Q08AG7 82 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 DOC2AQ14183 400 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 PAN3Q58A45 887 aaKnown RBP12.11□□□□□ -0.47
SMC4-202ENST00000357388 YIF1BQ5BJH7 314 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.11□□□□□ -0.47
SMC4-202ENST00000357388 CLDN22Q8N7P3 220 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 NRG4Q8WWG1 115 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 VPS25Q9BRG1 176 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 KCNIP2Q9NS61 270 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 FBXL4Q9UKA2 621 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 RASD1Q9Y272 281 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 A3GALT2U3KPV4 340 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 SURF4O15260 269 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 GPR39O43194 453 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 UBL4AP11441 157 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 C4orf17Q53FE4 359 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 Q6ZNX1 250 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 FAM58AQ8N1B3 248 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 C15orf54Q8N8G6 183 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 OR6F1Q8NGZ6 308 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 TMEM163Q8TC26 289 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 SGK3Q96BR1 496 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 SLC6A17Q9H1V8 727 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 PUS1Q9Y606 427 aaKnown RBP eCLIP12.1□□□□□ -0.47
SMC4-202ENST00000357388 HEPACAM2A8MVW5 462 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 CPNE6O95741 557 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 C5AR1P21730 350 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 RABIFP47224 123 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 FABP6P51161 128 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 ADARB1P78563 741 aaKnown RBP12.1□□□□□ -0.47
SMC4-202ENST00000357388 SPCS2Q15005 226 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 ZNF74Q16587 644 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 BAGE3Q86Y29 109 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 BAGE2Q86Y30 109 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 OR2A12Q8NGT7 310 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 NPLOC4Q8TAT6 608 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 MIB2Q96AX9 1013 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 SGCZQ96LD1 299 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 SORCS2Q96PQ0 1159 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 ST6GALNAC5Q9BVH7 336 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 ARHGAP33O14559 1287 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 ALX3O95076 343 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 ITGB2P05107 769 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 DHRS4L1P0CG22 281 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 ACP2P11117 423 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 PSMB1P20618 241 aaKnown RBP12.1□□□□□ -0.47
SMC4-202ENST00000357388 PRPH2P23942 346 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 TBPL1P62380 186 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 RBPJQ06330 500 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 DSC1Q08554 894 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 TP53I3Q53FA7 332 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 DTWD1Q8N5C7 304 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 BOLLQ8N9W6 283 aaKnown RBP12.1□□□□□ -0.47
SMC4-202ENST00000357388 LINC01599Q8WXQ3 324 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 PEBP4Q96S96 227 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 SLC29A1Q99808 456 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 SIAEQ9HAT2 523 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 GPR52Q9Y2T5 361 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 TMEM82A0PJX8 343 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 FZD9O00144 591 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 ADAM23O75077 832 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 INHBCP55103 352 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 CARD17Q5XLA6 110 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 ALKAL2Q6UX46 152 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 B3GNT8Q7Z7M8 397 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 DNAJC5GQ8N7S2 189 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 BSCL2Q96G97 398 aaPredicted RBP12.1□□□□□ -0.47
SMC4-202ENST00000357388 MRGPRX2Q96LB1 330 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 PRRC1Q96M27 445 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 C1QTNF2Q9BXJ5 285 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 TGIF2Q9GZN2 237 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 BABAM2Q9NXR7 383 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 UGT2A1Q9Y4X1 527 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms