RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 GRHL3Q8TE85 626 aa18.79■□□□□ 0.6
CHRNA3-202ENST00000348639 C6orf62Q9GZU0 229 aaPredicted RBP18.79■□□□□ 0.6
CHRNA3-202ENST00000348639 ISYNA1Q9NPH2 558 aa18.79■□□□□ 0.6
CHRNA3-202ENST00000348639 CUTCQ9NTM9 273 aa18.79■□□□□ 0.6
CHRNA3-202ENST00000348639 TBCCD1Q9NVR7 557 aa18.79■□□□□ 0.6
CHRNA3-202ENST00000348639 CBLCQ9ULV8 474 aa18.79■□□□□ 0.6
CHRNA3-202ENST00000348639 ANKRD33BA6NCL7 494 aa18.79■□□□□ 0.6
CHRNA3-202ENST00000348639 KPNA4O00629 521 aaPredicted RBP18.79■□□□□ 0.6
CHRNA3-202ENST00000348639 BHLHE40O14503 412 aa18.79■□□□□ 0.6
CHRNA3-202ENST00000348639 ADAM11O75078 769 aa18.79■□□□□ 0.6
CHRNA3-202ENST00000348639 OR2B3O76000 313 aa18.79■□□□□ 0.6
CHRNA3-202ENST00000348639 SLC2A10O95528 541 aa18.79■□□□□ 0.6
CHRNA3-202ENST00000348639 BMP7P18075 431 aa18.79■□□□□ 0.6
CHRNA3-202ENST00000348639 FUT1P19526 365 aa18.79■□□□□ 0.6
CHRNA3-202ENST00000348639 HTR1FP30939 366 aa18.79■□□□□ 0.6
CHRNA3-202ENST00000348639 ATP12AP54707 1039 aa18.79■□□□□ 0.6
CHRNA3-202ENST00000348639 LIPKQ5VXJ0 399 aa18.79■□□□□ 0.6
CHRNA3-202ENST00000348639 TUBA3EQ6PEY2 450 aa18.79■□□□□ 0.6
CHRNA3-202ENST00000348639 BMP8AQ7Z5Y6 402 aa18.79■□□□□ 0.6
CHRNA3-202ENST00000348639 CMIPQ8IY22 773 aa18.79■□□□□ 0.6
CHRNA3-202ENST00000348639 SLC25A45Q8N413 288 aa18.79■□□□□ 0.6
CHRNA3-202ENST00000348639 PTCHD1Q96NR3 888 aa18.79■□□□□ 0.6
CHRNA3-202ENST00000348639 ZNF426Q9BUY5 554 aa18.79■□□□□ 0.6
CHRNA3-202ENST00000348639 DUSP15Q9H1R2 295 aaPredicted RBP18.79■□□□□ 0.6
CHRNA3-202ENST00000348639 EXOSC4Q9NPD3 245 aaKnown RBP18.79■□□□□ 0.6
CHRNA3-202ENST00000348639 MEPEQ9NQ76 525 aaPredicted RBP18.79■□□□□ 0.6
CHRNA3-202ENST00000348639 LANCL2Q9NS86 450 aa18.79■□□□□ 0.6
CHRNA3-202ENST00000348639 PRODH2Q9UF12 536 aa18.79■□□□□ 0.6
CHRNA3-202ENST00000348639 EXOGQ9Y2C4 368 aaKnown RBP18.79■□□□□ 0.6
CHRNA3-202ENST00000348639 CSNK1G3Q9Y6M4 447 aa18.79■□□□□ 0.6
CHRNA3-202ENST00000348639 RBM34P42696 430 aaKnown RBP18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 ARL4DP49703 201 aa18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 PPP5CP53041 499 aa18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 HSD11B2P80365 405 aa18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 BNC1Q01954 994 aa18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 MED25Q71SY5 747 aa18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 ZNF550Q7Z398 422 aa18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 BCORP1Q8N888 145 aa18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 ABTB1Q969K4 478 aaPredicted RBP18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 ARSGQ96EG1 525 aa18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 YIPF2Q9BWQ6 316 aa18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 FN3KQ9H479 309 aa18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 HINT3Q9NQE9 182 aaKnown RBP18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 H2AFY2Q9P0M6 372 aaPredicted RBP18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 SIGLEC7Q9Y286 467 aa18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 OR10H1Q9Y4A9 318 aa18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 TAF4O00268 1085 aa18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 WWP2O00308 870 aa18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 HYAL3O43820 417 aaPredicted RBP18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 CLPSP04118 112 aa18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 LIMS3P0CW19 117 aa18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 LIMS4P0CW20 117 aa18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 ALAS2P22557 587 aa18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 CD40LGP29965 261 aa18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 OR2G6Q5TZ20 316 aa18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 TTLL10Q6ZVT0 673 aa18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 PLXDC1Q8IUK5 500 aa18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 CPOQ8IVL8 374 aa18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 SLC35F3Q8IY50 421 aa18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 LNX2Q8N448 690 aa18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 BBS1Q8NFJ9 593 aa18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 OR7G1Q8NGA0 311 aa18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 MVB12AQ96EY5 273 aa18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 ENKD1Q9H0I2 346 aa18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 SIAEQ9HAT2 523 aa18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 GMEB2Q9UKD1 530 aa18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 SSR3Q9UNL2 185 aa18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 MMACHCQ9Y4U1 282 aa18.78■□□□□ 0.6
CHRNA3-202ENST00000348639 TP53BP1Q12888 1972 aaPredicted RBP18.77■□□□□ 0.6
CHRNA3-202ENST00000348639 TMEM150CB9EJG8 249 aa18.77■□□□□ 0.6
CHRNA3-202ENST00000348639 CBFA2T3O75081 653 aa18.77■□□□□ 0.6
CHRNA3-202ENST00000348639 S100A5P33763 92 aa18.77■□□□□ 0.6
CHRNA3-202ENST00000348639 ATP1A4Q13733 1029 aa18.77■□□□□ 0.6
CHRNA3-202ENST00000348639 NNATQ16517 81 aa18.77■□□□□ 0.6
CHRNA3-202ENST00000348639 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.77■□□□□ 0.6
CHRNA3-202ENST00000348639 SMARCD3Q6STE5 483 aa18.77■□□□□ 0.6
CHRNA3-202ENST00000348639 CXXC5Q7LFL8 322 aaKnown RBP18.77■□□□□ 0.6
CHRNA3-202ENST00000348639 SHFQ7M4L6 423 aa18.77■□□□□ 0.6
CHRNA3-202ENST00000348639 ASPNQ9BXN1 380 aa18.77■□□□□ 0.6
CHRNA3-202ENST00000348639 SPIN1Q9Y657 262 aaPredicted RBP18.77■□□□□ 0.6
CHRNA3-202ENST00000348639 A8MU76 341 aa18.76■□□□□ 0.59
CHRNA3-202ENST00000348639 C17orf105B2RV13 164 aa18.76■□□□□ 0.59
CHRNA3-202ENST00000348639 DUX1O43812 170 aa18.76■□□□□ 0.59
CHRNA3-202ENST00000348639 RFPL3O75679 317 aa18.76■□□□□ 0.59
CHRNA3-202ENST00000348639 TSPAN19P0C672 248 aa18.76■□□□□ 0.59
CHRNA3-202ENST00000348639 OCM2P0CE71 109 aa18.76■□□□□ 0.59
CHRNA3-202ENST00000348639 OCMP0CE72 109 aaPredicted RBP18.76■□□□□ 0.59
CHRNA3-202ENST00000348639 SAGP10523 405 aaPredicted RBP18.76■□□□□ 0.59
CHRNA3-202ENST00000348639 GLB1P16278 677 aa18.76■□□□□ 0.59
CHRNA3-202ENST00000348639 SLC1A3P43003 542 aa18.76■□□□□ 0.59
CHRNA3-202ENST00000348639 IFITM3Q01628 133 aa18.76■□□□□ 0.59
CHRNA3-202ENST00000348639 CFHR1Q03591 330 aa18.76■□□□□ 0.59
CHRNA3-202ENST00000348639 DSG2Q14126 1118 aa18.76■□□□□ 0.59
CHRNA3-202ENST00000348639 ALG10BQ5I7T1 473 aa18.76■□□□□ 0.59
CHRNA3-202ENST00000348639 LAPTM4BQ86VI4 370 aa18.76■□□□□ 0.59
CHRNA3-202ENST00000348639 GID4Q8IVV7 300 aa18.76■□□□□ 0.59
CHRNA3-202ENST00000348639 OR13C2Q8NGS9 318 aa18.76■□□□□ 0.59
CHRNA3-202ENST00000348639 GATAD2BQ8WXI9 593 aa18.76■□□□□ 0.59
CHRNA3-202ENST00000348639 TM9SF4Q92544 642 aa18.76■□□□□ 0.59
CHRNA3-202ENST00000348639 TRMT61AQ96FX7 289 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms