RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 GPX2P18283 190 aa13.78□□□□□ -0.2
UBE3B-201ENST00000340074 POU3F2P20265 443 aaPredicted RBP13.78□□□□□ -0.2
UBE3B-201ENST00000340074 RPS4Y1P22090 263 aaKnown RBP13.78□□□□□ -0.2
UBE3B-201ENST00000340074 PTGER4P35408 488 aa13.78□□□□□ -0.2
UBE3B-201ENST00000340074 PGM1P36871 562 aa13.78□□□□□ -0.2
UBE3B-201ENST00000340074 SMSP52788 366 aa13.78□□□□□ -0.2
UBE3B-201ENST00000340074 KCNJ10P78508 379 aa13.78□□□□□ -0.2
UBE3B-201ENST00000340074 GNA13Q14344 377 aa13.78□□□□□ -0.2
UBE3B-201ENST00000340074 CAPRIN1Q14444 709 aaKnown RBP13.78□□□□□ -0.2
UBE3B-201ENST00000340074 MAPRE2Q15555 327 aa13.78□□□□□ -0.2
UBE3B-201ENST00000340074 TOMM34Q15785 309 aaPredicted RBP13.78□□□□□ -0.2
UBE3B-201ENST00000340074 MMEL1Q495T6 779 aa13.78□□□□□ -0.2
UBE3B-201ENST00000340074 ACSF3Q4G176 576 aaPredicted RBP13.78□□□□□ -0.2
UBE3B-201ENST00000340074 MTDHQ86UE4 582 aaKnown RBP13.78□□□□□ -0.2
UBE3B-201ENST00000340074 SNX32Q86XE0 403 aa13.78□□□□□ -0.2
UBE3B-201ENST00000340074 ZNF808Q8N4W9 903 aaPredicted RBP13.78□□□□□ -0.2
UBE3B-201ENST00000340074 OR5W2Q8NH69 310 aa13.78□□□□□ -0.2
UBE3B-201ENST00000340074 GPR119Q8TDV5 335 aa13.78□□□□□ -0.2
UBE3B-201ENST00000340074 WDR60Q8WVS4 1066 aa13.78□□□□□ -0.2
UBE3B-201ENST00000340074 RND1Q92730 232 aa13.78□□□□□ -0.2
UBE3B-201ENST00000340074 ZNF524Q96C55 264 aa13.78□□□□□ -0.2
UBE3B-201ENST00000340074 RNF145Q96MT1 663 aa13.78□□□□□ -0.2
UBE3B-201ENST00000340074 THUMPD3Q9BV44 507 aaKnown RBP13.78□□□□□ -0.2
UBE3B-201ENST00000340074 LAT2Q9GZY6 243 aa13.78□□□□□ -0.2
UBE3B-201ENST00000340074 A4GALTQ9NPC4 353 aa13.78□□□□□ -0.2
UBE3B-201ENST00000340074 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.78□□□□□ -0.2
UBE3B-201ENST00000340074 SLC35A3Q9Y2D2 325 aa13.78□□□□□ -0.2
UBE3B-201ENST00000340074 DSPPQ9NZW4 1301 aa13.78□□□□□ -0.2
UBE3B-201ENST00000340074 LINC01387J3KSC0 135 aa13.77□□□□□ -0.21
UBE3B-201ENST00000340074 SLC22A2O15244 555 aa13.77□□□□□ -0.21
UBE3B-201ENST00000340074 SNX3O60493 162 aa13.77□□□□□ -0.21
UBE3B-201ENST00000340074 CLDN1O95832 211 aa13.77□□□□□ -0.21
UBE3B-201ENST00000340074 EPPINO95925 133 aa13.77□□□□□ -0.21
UBE3B-201ENST00000340074 PEPDP12955 493 aa13.77□□□□□ -0.21
UBE3B-201ENST00000340074 IL7RP16871 459 aa13.77□□□□□ -0.21
UBE3B-201ENST00000340074 CBFBQ13951 182 aa13.77□□□□□ -0.21
UBE3B-201ENST00000340074 SELPLGQ14242 412 aa13.77□□□□□ -0.21
UBE3B-201ENST00000340074 BCL2A1Q16548 175 aa13.77□□□□□ -0.21
UBE3B-201ENST00000340074 GCNT6Q5T4J0 391 aa13.77□□□□□ -0.21
UBE3B-201ENST00000340074 REP15Q6BDI9 236 aa13.77□□□□□ -0.21
UBE3B-201ENST00000340074 XKRXQ6PP77 449 aa13.77□□□□□ -0.21
UBE3B-201ENST00000340074 SEM1Q6ZVN7 128 aa13.77□□□□□ -0.21
UBE3B-201ENST00000340074 PEX5LQ8IYB4 626 aa13.77□□□□□ -0.21
UBE3B-201ENST00000340074 UBQLNLQ8IYU4 475 aa13.77□□□□□ -0.21
UBE3B-201ENST00000340074 GTPBP8Q8N3Z3 284 aaPredicted RBP13.77□□□□□ -0.21
UBE3B-201ENST00000340074 FAM71CQ8NEG0 241 aa13.77□□□□□ -0.21
UBE3B-201ENST00000340074 TOR1AIP2Q8NFQ8 470 aa13.77□□□□□ -0.21
UBE3B-201ENST00000340074 OR52P1PQ8NH57 321 aa13.77□□□□□ -0.21
UBE3B-201ENST00000340074 POC1BQ8TC44 478 aa13.77□□□□□ -0.21
UBE3B-201ENST00000340074 ZPLD1Q8TCW7 415 aa13.77□□□□□ -0.21
UBE3B-201ENST00000340074 SMPDL3BQ92485 455 aa13.77□□□□□ -0.21
UBE3B-201ENST00000340074 PMM1Q92871 262 aa13.77□□□□□ -0.21
UBE3B-201ENST00000340074 TRIB1Q96RU8 372 aa13.77□□□□□ -0.21
UBE3B-201ENST00000340074 TUBA1CQ9BQE3 449 aa13.77□□□□□ -0.21
UBE3B-201ENST00000340074 SLC39A3Q9BRY0 314 aa13.77□□□□□ -0.21
UBE3B-201ENST00000340074 ADGRG4Q8IZF6 3080 aa13.76□□□□□ -0.21
UBE3B-201ENST00000340074 CRYBG3Q68DQ2 2970 aa13.76□□□□□ -0.21
UBE3B-201ENST00000340074 A0A0G2JPF8 293 aa13.76□□□□□ -0.21
UBE3B-201ENST00000340074 C7orf72A4D263 438 aa13.76□□□□□ -0.21
UBE3B-201ENST00000340074 BBIP1A8MTZ0 92 aa13.76□□□□□ -0.21
UBE3B-201ENST00000340074 HNRNPCL2B2RXH8 293 aa13.76□□□□□ -0.21
UBE3B-201ENST00000340074 HNRNPCL3B7ZW38 293 aa13.76□□□□□ -0.21
UBE3B-201ENST00000340074 H0YC42 278 aa13.76□□□□□ -0.21
UBE3B-201ENST00000340074 SEC14L5O43304 696 aa13.76□□□□□ -0.21
UBE3B-201ENST00000340074 HNRNPCL1O60812 293 aaKnown RBP13.76□□□□□ -0.21
UBE3B-201ENST00000340074 DBIP07108 87 aaKnown RBP13.76□□□□□ -0.21
UBE3B-201ENST00000340074 HNRNPCL4P0DMR1 293 aa13.76□□□□□ -0.21
UBE3B-201ENST00000340074 ARAFP10398 606 aa13.76□□□□□ -0.21
UBE3B-201ENST00000340074 NID1P14543 1247 aa13.76□□□□□ -0.21
UBE3B-201ENST00000340074 PSMA4P25789 261 aaKnown RBP13.76□□□□□ -0.21
UBE3B-201ENST00000340074 SUCLG1P53597 346 aaKnown RBP13.76□□□□□ -0.21
UBE3B-201ENST00000340074 TPD52P55327 224 aaPredicted RBP13.76□□□□□ -0.21
UBE3B-201ENST00000340074 CLDN20P56880 219 aa13.76□□□□□ -0.21
UBE3B-201ENST00000340074 MTPNP58546 118 aa13.76□□□□□ -0.21
UBE3B-201ENST00000340074 PLAURQ03405 335 aa13.76□□□□□ -0.21
UBE3B-201ENST00000340074 FOXF1Q12946 379 aa13.76□□□□□ -0.21
UBE3B-201ENST00000340074 CYLC2Q14093 348 aaPredicted RBP13.76□□□□□ -0.21
UBE3B-201ENST00000340074 SF3B4Q15427 424 aaKnown RBP eCLIP13.76□□□□□ -0.21
UBE3B-201ENST00000340074 CDSNQ15517 529 aa13.76□□□□□ -0.21
UBE3B-201ENST00000340074 TRMT5Q32P41 509 aaKnown RBP13.76□□□□□ -0.21
UBE3B-201ENST00000340074 COQ5Q5HYK3 327 aa13.76□□□□□ -0.21
UBE3B-201ENST00000340074 VRK2Q86Y07 508 aa13.76□□□□□ -0.21
UBE3B-201ENST00000340074 CMIPQ8IY22 773 aa13.76□□□□□ -0.21
UBE3B-201ENST00000340074 POU5F2Q8N7G0 328 aa13.76□□□□□ -0.21
UBE3B-201ENST00000340074 OR10Q1Q8NGQ4 319 aa13.76□□□□□ -0.21
UBE3B-201ENST00000340074 NFKBIDQ8NI38 313 aa13.76□□□□□ -0.21
UBE3B-201ENST00000340074 CNOT9Q92600 299 aaKnown RBP13.76□□□□□ -0.21
UBE3B-201ENST00000340074 SDCCAG3Q96C92 435 aa13.76□□□□□ -0.21
UBE3B-201ENST00000340074 CCDC106Q9BWC9 280 aa13.76□□□□□ -0.21
UBE3B-201ENST00000340074 FAM53CQ9NYF3 392 aa13.76□□□□□ -0.21
UBE3B-201ENST00000340074 COQ3Q9NZJ6 369 aa13.76□□□□□ -0.21
UBE3B-201ENST00000340074 RNF6Q9Y252 685 aa13.76□□□□□ -0.21
UBE3B-201ENST00000340074 AP4B1Q9Y6B7 739 aa13.76□□□□□ -0.21
UBE3B-201ENST00000340074 MPDZO75970 2070 aa13.76□□□□□ -0.21
UBE3B-201ENST00000340074 HECTD1Q9ULT8 2610 aa13.75□□□□□ -0.21
UBE3B-201ENST00000340074 A0A0G2JNJ9 132 aa13.75□□□□□ -0.21
UBE3B-201ENST00000340074 C5orf58C9J3I9 102 aa13.75□□□□□ -0.21
UBE3B-201ENST00000340074 MRASO14807 208 aa13.75□□□□□ -0.21
UBE3B-201ENST00000340074 DNAJA2O60884 412 aa13.75□□□□□ -0.21
UBE3B-201ENST00000340074 TOXO94900 526 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms