RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 RASL10BQ96S79 203 aa13.47□□□□□ -0.25
CBX3-201ENST00000337620 TRIM2Q9C040 744 aa13.47□□□□□ -0.25
CBX3-201ENST00000337620 P4HTMQ9NXG6 502 aa13.47□□□□□ -0.25
CBX3-201ENST00000337620 RPS6KB2Q9UBS0 482 aa13.47□□□□□ -0.25
CBX3-201ENST00000337620 MGAT4BQ9UQ53 548 aa13.47□□□□□ -0.25
CBX3-201ENST00000337620 CDRT15L2A8MXV6 281 aa13.46□□□□□ -0.25
CBX3-201ENST00000337620 ALG1L2C9J202 215 aa13.46□□□□□ -0.25
CBX3-201ENST00000337620 GMFGO60234 142 aa13.46□□□□□ -0.25
CBX3-201ENST00000337620 FADS1O60427 444 aa13.46□□□□□ -0.25
CBX3-201ENST00000337620 ANGPTL1O95841 491 aa13.46□□□□□ -0.25
CBX3-201ENST00000337620 NGFRP08138 427 aa13.46□□□□□ -0.25
CBX3-201ENST00000337620 LINGO3P0C6S8 592 aa13.46□□□□□ -0.25
CBX3-201ENST00000337620 ICAM2P13598 275 aa13.46□□□□□ -0.25
CBX3-201ENST00000337620 MYF6P23409 242 aa13.46□□□□□ -0.25
CBX3-201ENST00000337620 EPHA2P29317 976 aa13.46□□□□□ -0.25
CBX3-201ENST00000337620 UGT2B15P54855 530 aa13.46□□□□□ -0.25
CBX3-201ENST00000337620 TPD52P55327 224 aaPredicted RBP13.46□□□□□ -0.25
CBX3-201ENST00000337620 ZNF613Q6PF04 617 aa13.46□□□□□ -0.25
CBX3-201ENST00000337620 ZER1Q7Z7L7 766 aa13.46□□□□□ -0.25
CBX3-201ENST00000337620 NACC2Q96BF6 587 aa13.46□□□□□ -0.25
CBX3-201ENST00000337620 TMCO6Q96DC7 493 aa13.46□□□□□ -0.25
CBX3-201ENST00000337620 CEP250Q9BV73 2442 aa13.46□□□□□ -0.25
CBX3-201ENST00000337620 IL17BQ9UHF5 180 aa13.46□□□□□ -0.25
CBX3-201ENST00000337620 PTPRBP23467 1997 aa13.46□□□□□ -0.25
CBX3-201ENST00000337620 A0A1B0GWA3 101 aa13.46□□□□□ -0.26
CBX3-201ENST00000337620 A0A1W2PQD3 144 aa13.46□□□□□ -0.26
CBX3-201ENST00000337620 HCRTR2O43614 444 aa13.46□□□□□ -0.26
CBX3-201ENST00000337620 GFRA3O60609 400 aa13.46□□□□□ -0.26
CBX3-201ENST00000337620 ITGA10O75578 1167 aa13.46□□□□□ -0.26
CBX3-201ENST00000337620 HPP00738 406 aa13.46□□□□□ -0.26
CBX3-201ENST00000337620 ADAP00813 363 aa13.46□□□□□ -0.26
CBX3-201ENST00000337620 ITGAMP11215 1152 aa13.46□□□□□ -0.26
CBX3-201ENST00000337620 NAGAP17050 411 aa13.46□□□□□ -0.26
CBX3-201ENST00000337620 CD82P27701 267 aa13.46□□□□□ -0.26
CBX3-201ENST00000337620 TMED10P49755 219 aaKnown RBP13.46□□□□□ -0.26
CBX3-201ENST00000337620 COPZ1P61923 177 aa13.46□□□□□ -0.26
CBX3-201ENST00000337620 SKP2Q13309 424 aa13.46□□□□□ -0.26
CBX3-201ENST00000337620 UGT2A3Q6UWM9 527 aa13.46□□□□□ -0.26
CBX3-201ENST00000337620 USP51Q70EK9 711 aa13.46□□□□□ -0.26
CBX3-201ENST00000337620 PRICKLE2Q7Z3G6 844 aa13.46□□□□□ -0.26
CBX3-201ENST00000337620 MEX3DQ86XN8 651 aaKnown RBP13.46□□□□□ -0.26
CBX3-201ENST00000337620 LSMEM1Q8N8F7 131 aa13.46□□□□□ -0.26
CBX3-201ENST00000337620 FAM71CQ8NEG0 241 aa13.46□□□□□ -0.26
CBX3-201ENST00000337620 ACOT11Q8WXI4 607 aaPredicted RBP13.46□□□□□ -0.26
CBX3-201ENST00000337620 NODALQ96S42 347 aa13.46□□□□□ -0.26
CBX3-201ENST00000337620 UCK2Q9BZX2 261 aa13.46□□□□□ -0.26
CBX3-201ENST00000337620 GRIP2Q9C0E4 1043 aa13.46□□□□□ -0.26
CBX3-201ENST00000337620 CDCP1Q9H5V8 836 aa13.46□□□□□ -0.26
CBX3-201ENST00000337620 A0A0B4J2E0 115 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 A0A1B0GX12 115 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 C17orf51A8MQB3 221 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 BCKDKO14874 412 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 SLC16A6O15403 523 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 IFNGR2P38484 337 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 CLK3P49761 638 aaKnown RBP13.45□□□□□ -0.26
CBX3-201ENST00000337620 CHN2P52757 468 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 ZNF117Q03924 483 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 TGIF1Q15583 401 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 KLHL17Q6TDP4 642 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 NUP54Q7Z3B4 507 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 MRGPREQ86SM8 312 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 RAB43Q86YS6 212 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 TOR1AIP2Q8NFQ8 470 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 HGDQ93099 445 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 PRSS27Q9BQR3 290 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 LAT2Q9GZY6 243 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 ASCL3Q9NQ33 180 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 EXOSC3Q9NQT5 275 aaKnown RBP13.45□□□□□ -0.26
CBX3-201ENST00000337620 SELENONQ9NZV5 590 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 C2orf72A6NCS6 295 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 MAN1A2O60476 641 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 LYPD3O95274 346 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 ITPKBP27987 946 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 SOX3P41225 446 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 IDH2P48735 452 aaKnown RBP13.45□□□□□ -0.26
CBX3-201ENST00000337620 RPP38P78345 283 aaKnown RBP13.45□□□□□ -0.26
CBX3-201ENST00000337620 Q0VFX4 171 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 ALG10BQ5I7T1 473 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 C1orf94Q6P1W5 598 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 LYPD8Q6UX82 237 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 WDR88Q6ZMY6 472 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 MBOAT2Q6ZWT7 520 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 RPS19BP1Q86WX3 136 aaKnown RBP13.45□□□□□ -0.26
CBX3-201ENST00000337620 NRMQ8IXM6 262 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 C8orf59Q8N0T1 100 aaPredicted RBP13.45□□□□□ -0.26
CBX3-201ENST00000337620 SLC15A4Q8N697 577 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 PIGXQ8TBF5 258 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 GATA6Q92908 595 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 DGCR6LQ9BY27 220 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 GABARAPL3Q9BY60 117 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 FAM117AQ9C073 453 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 GPN2Q9H9Y4 310 aaPredicted RBP13.45□□□□□ -0.26
CBX3-201ENST00000337620 GMPPBQ9Y5P6 360 aa13.45□□□□□ -0.26
CBX3-201ENST00000337620 HEATR5AQ86XA9 2040 aa13.44□□□□□ -0.26
CBX3-201ENST00000337620 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.44□□□□□ -0.26
CBX3-201ENST00000337620 CHP2O43745 196 aa13.44□□□□□ -0.26
CBX3-201ENST00000337620 PIP5K1CO60331 668 aa13.44□□□□□ -0.26
CBX3-201ENST00000337620 FBXO45P0C2W1 286 aa13.44□□□□□ -0.26
CBX3-201ENST00000337620 ENDOUP21128 410 aaKnown RBP13.44□□□□□ -0.26
CBX3-201ENST00000337620 POU1F1P28069 291 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms