RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 CDHR4A6H8M9 788 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 OR6C65A6NJZ3 312 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 NME4O00746 187 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 ZNF264O43296 627 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 HCRTR2O43614 444 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 SLC28A2O43868 658 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 SEC24DO94855 1032 aaPredicted RBP3□□□□□ -1.93
SCAMP1-201ENST00000320280 HPRP00739 348 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 MT-ATP6P00846 226 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 RAP2AP10114 183 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 FCGR2AP12318 317 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 PEPDP12955 493 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 PSMA4P25789 261 aaKnown RBP3□□□□□ -1.93
SCAMP1-201ENST00000320280 ITGA3P26006 1051 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 GABRA3P34903 492 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 CDKN2CP42773 168 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 CRATP43155 626 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 CENPAP49450 140 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 EFNA3P52797 238 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 HMGA2P52926 109 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 DUSP2Q05923 314 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 Q0VFX4 171 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 ADRM1Q16186 407 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 ZSCAN26Q16670 478 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 TRMT12Q53H54 448 aaKnown RBP3□□□□□ -1.93
SCAMP1-201ENST00000320280 CCDC157Q569K6 752 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 CD300LDQ6UXZ3 194 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 Q6ZPB1 254 aaPredicted RBP3□□□□□ -1.93
SCAMP1-201ENST00000320280 GRINAQ7Z429 371 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 PLCZ1Q86YW0 608 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 DEFB107AQ8IZN7 70 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 GTPBP8Q8N3Z3 284 aaPredicted RBP3□□□□□ -1.93
SCAMP1-201ENST00000320280 SCAIQ8N9R8 606 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 OR52P1PQ8NH57 321 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 SLC38A5Q8WUX1 472 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 IPCEF1Q8WWN9 437 aaPredicted RBP3□□□□□ -1.93
SCAMP1-201ENST00000320280 UBE2FQ969M7 185 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 TMEM19Q96HH6 336 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 BOD1Q96IK1 185 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 TREX2Q9BQ50 279 aaPredicted RBP3□□□□□ -1.93
SCAMP1-201ENST00000320280 MACROD1Q9BQ69 325 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 PIGQQ9BRB3 760 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 TBL1XR1Q9BZK7 514 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 NXF5Q9H1B4 397 aaKnown RBP3□□□□□ -1.93
SCAMP1-201ENST00000320280 VCX3BQ9H321 246 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 SERHL2Q9H4I8 314 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 CAAP1Q9H8G2 361 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 SERINC1Q9NRX5 453 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 GIMAP2Q9UG22 337 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 IL17BQ9UHF5 180 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 TRAPPC4Q9Y296 219 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 SLC6A5Q9Y345 797 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 HDGFL3Q9Y3E1 203 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 SNX8Q9Y5X2 465 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 USP34Q70CQ2 3546 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 FAM186AA6NE01 2351 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 TNFSF12-TNFSF13A0A0A6YY99 330 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 FAM149AA5PLN7 773 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 ACOT8O14734 319 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 AIM2O14862 343 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 SUV39H1O43463 412 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 CHP2O43745 196 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 BCAS1O75363 584 aaPredicted RBP3□□□□□ -1.93
SCAMP1-201ENST00000320280 SORBS2O94875 1100 aaKnown RBP3□□□□□ -1.93
SCAMP1-201ENST00000320280 PRSS23O95084 383 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 GBAP04062 536 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 GABRA1P14867 456 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 HPGDP15428 266 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 NQO1P15559 274 aaKnown RBP3□□□□□ -1.93
SCAMP1-201ENST00000320280 AGAP20933 346 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 SLC7A1P30825 629 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 NR0B1P51843 470 aaKnown RBP3□□□□□ -1.93
SCAMP1-201ENST00000320280 POLR2HP52434 150 aaKnown RBP3□□□□□ -1.93
SCAMP1-201ENST00000320280 CTBP2P56545 445 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 ACTR3P61158 418 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 TEKQ02763 1124 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 RBPJQ06330 500 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 FUT5Q11128 374 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 SKP2Q13309 424 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 LTB4RQ15722 352 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 RFX4Q33E94 735 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 GRAMD1BQ3KR37 738 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 ULK2Q8IYT8 1036 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 PSD4Q8NDX1 1056 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 B4GALNT2Q8NHY0 566 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 BRIX1Q8TDN6 353 aaKnown RBP3□□□□□ -1.93
SCAMP1-201ENST00000320280 CDS1Q92903 461 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 SLC38A4Q969I6 547 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 GFM2Q969S9 779 aaKnown RBP3□□□□□ -1.93
SCAMP1-201ENST00000320280 SLC47A1Q96FL8 570 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 OTUB1Q96FW1 271 aaPredicted RBP3□□□□□ -1.93
SCAMP1-201ENST00000320280 PYURFQ96I23 114 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 MYCBPQ99417 103 aaPredicted RBP3□□□□□ -1.93
SCAMP1-201ENST00000320280 CDCP1Q9H5V8 836 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 AGPAT4Q9NRZ5 378 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 SELENONQ9NZV5 590 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 C6orf203Q9P0P8 240 aaPredicted RBP3□□□□□ -1.93
SCAMP1-201ENST00000320280 SEC14L3Q9UDX4 400 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 BAIAP2Q9UQB8 552 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 CORINQ9Y5Q5 1042 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms