RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 OR4C3Q8NH37 302 aa14.32□□□□□ -0.12
LSM6-201ENST00000296581 TRUB1Q8WWH5 349 aaKnown RBP14.32□□□□□ -0.12
LSM6-201ENST00000296581 ZNF559Q9BR84 538 aa14.32□□□□□ -0.12
LSM6-201ENST00000296581 WWTR1Q9GZV5 400 aa14.32□□□□□ -0.12
LSM6-201ENST00000296581 HOXD1Q9GZZ0 328 aa14.32□□□□□ -0.12
LSM6-201ENST00000296581 CORINQ9Y5Q5 1042 aa14.32□□□□□ -0.12
LSM6-201ENST00000296581 KPNA4O00629 521 aaPredicted RBP14.31□□□□□ -0.12
LSM6-201ENST00000296581 ANGPTL1O95841 491 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 LCN1P31025 176 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 EMP2P54851 167 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 TUBA1BP68363 451 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 ZBED5Q49AG3 693 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 KLHL26Q53HC5 615 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 ZNF730Q6ZMV8 503 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 TUBA1AQ71U36 451 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 NLGN4XQ8N0W4 816 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 DEPDC4Q8N2C3 294 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 C17orf47Q8NEP4 570 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 GAL3ST4Q96RP7 486 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 GPA33Q99795 319 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 PRSS27Q9BQR3 290 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 SEMA4CQ9C0C4 833 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 WDR54Q9H977 334 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 MRTO4Q9UKD2 239 aaKnown RBP14.31□□□□□ -0.12
LSM6-201ENST00000296581 SLC7A7Q9UM01 511 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 RNF6Q9Y252 685 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 SERINC4A6NH21 518 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 SAGE2PA6NJ88 616 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 WBP4O75554 376 aaKnown RBP14.31□□□□□ -0.12
LSM6-201ENST00000296581 GSTM3P21266 225 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 ACAA2P42765 397 aaKnown RBP14.31□□□□□ -0.12
LSM6-201ENST00000296581 IFITM2Q01629 132 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 ITGADQ13349 1161 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 OXA1LQ15070 435 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 KIF26BQ2KJY2 2108 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 HLA-DQA1Q5Y7H0 255 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 ZNF613Q6PF04 617 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 ZNF773Q6PK81 442 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 TMEM205Q6UW68 189 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 RFPL4BQ6ZWI9 263 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 MBOAT2Q6ZWT7 520 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 SLC29A4Q7RTT9 530 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 PRICKLE2Q7Z3G6 844 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 SLCO6A1Q86UG4 719 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 SLC15A4Q8N697 577 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 GNPDA2Q8TDQ7 276 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 APH1BQ8WW43 257 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 METTL21AQ8WXB1 218 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 UBE2FQ969M7 185 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 MED30Q96HR3 178 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 EDEM2Q9BV94 578 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 UBQLN4Q9NRR5 601 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 PCDHGA3Q9Y5H0 932 aa14.31□□□□□ -0.12
LSM6-201ENST00000296581 WDFY4Q6ZS81 3184 aa14.3□□□□□ -0.12
LSM6-201ENST00000296581 IGHV3-20A0A0C4DH32 117 aa14.3□□□□□ -0.12
LSM6-201ENST00000296581 ADAM11O75078 769 aa14.3□□□□□ -0.12
LSM6-201ENST00000296581 NTN1O95631 604 aa14.3□□□□□ -0.12
LSM6-201ENST00000296581 ADH7P40394 386 aa14.3□□□□□ -0.12
LSM6-201ENST00000296581 OMPP47874 163 aa14.3□□□□□ -0.12
LSM6-201ENST00000296581 TEKQ02763 1124 aa14.3□□□□□ -0.12
LSM6-201ENST00000296581 ZNF550Q7Z398 422 aa14.3□□□□□ -0.12
LSM6-201ENST00000296581 B3GNT7Q8NFL0 401 aa14.3□□□□□ -0.12
LSM6-201ENST00000296581 RHOXF1Q8NHV9 184 aa14.3□□□□□ -0.12
LSM6-201ENST00000296581 PIGXQ8TBF5 258 aa14.3□□□□□ -0.12
LSM6-201ENST00000296581 PMEPA1Q969W9 287 aa14.3□□□□□ -0.12
LSM6-201ENST00000296581 CMKLR1Q99788 373 aa14.3□□□□□ -0.12
LSM6-201ENST00000296581 AKIRIN1Q9H9L7 192 aaPredicted RBP14.3□□□□□ -0.12
LSM6-201ENST00000296581 TMEM9BQ9NQ34 198 aa14.3□□□□□ -0.12
LSM6-201ENST00000296581 SLC39A1Q9NY26 324 aa14.3□□□□□ -0.12
LSM6-201ENST00000296581 AASSQ9UDR5 926 aa14.3□□□□□ -0.12
LSM6-201ENST00000296581 NXT1Q9UKK6 140 aaKnown RBP14.3□□□□□ -0.12
LSM6-201ENST00000296581 A0A1W2PPW3 197 aa14.3□□□□□ -0.12
LSM6-201ENST00000296581 A6NL46 340 aa14.3□□□□□ -0.12
LSM6-201ENST00000296581 PRR33A8MZF0 331 aa14.3□□□□□ -0.12
LSM6-201ENST00000296581 GABRB1P18505 474 aa14.3□□□□□ -0.12
LSM6-201ENST00000296581 PSPHP78330 225 aa14.3□□□□□ -0.12
LSM6-201ENST00000296581 FNDC7Q5VTL7 733 aa14.3□□□□□ -0.12
LSM6-201ENST00000296581 SLX4IPQ5VYV7 408 aa14.3□□□□□ -0.12
LSM6-201ENST00000296581 ESX1Q8N693 406 aa14.3□□□□□ -0.12
LSM6-201ENST00000296581 LSMEM1Q8N8F7 131 aa14.3□□□□□ -0.12
LSM6-201ENST00000296581 BPIFB6Q8NFQ5 453 aa14.3□□□□□ -0.12
LSM6-201ENST00000296581 TMEM255BQ8WV15 326 aa14.3□□□□□ -0.12
LSM6-201ENST00000296581 WDR77Q9BQA1 342 aaPredicted RBP14.3□□□□□ -0.12
LSM6-201ENST00000296581 CRB3Q9BUF7 120 aa14.3□□□□□ -0.12
LSM6-201ENST00000296581 TRIM2Q9C040 744 aa14.3□□□□□ -0.12
LSM6-201ENST00000296581 TMEM27Q9HBJ8 222 aa14.3□□□□□ -0.12
LSM6-201ENST00000296581 RASSF1Q9NS23 344 aa14.3□□□□□ -0.12
LSM6-201ENST00000296581 ZNF226Q9NYT6 803 aa14.3□□□□□ -0.12
LSM6-201ENST00000296581 AKAP7Q9P0M2 348 aaPredicted RBP14.3□□□□□ -0.12
LSM6-201ENST00000296581 ZNF223Q9UK11 482 aaPredicted RBP14.3□□□□□ -0.12
LSM6-201ENST00000296581 SLC35A3Q9Y2D2 325 aa14.3□□□□□ -0.12
LSM6-201ENST00000296581 FRYLO94915 3013 aa14.3□□□□□ -0.12
LSM6-201ENST00000296581 A0A0B4J2E0 115 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 A0A1B0GX12 115 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 H3BMQ9 156 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 KLF4O43474 513 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 UTS2O95399 124 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 SOX14O95416 240 aa14.29□□□□□ -0.12
LSM6-201ENST00000296581 KLK3P07288 261 aaPredicted RBP14.29□□□□□ -0.12
LSM6-201ENST00000296581 FMO3P31513 532 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms