RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 JUNBP17275 347 aaPredicted RBP14.13□□□□□ -0.15
COPS3-201ENST00000268717 GABRB1P18505 474 aa14.13□□□□□ -0.15
COPS3-201ENST00000268717 EEF1B2P24534 225 aaKnown RBP14.13□□□□□ -0.15
COPS3-201ENST00000268717 OMPP47874 163 aa14.13□□□□□ -0.15
COPS3-201ENST00000268717 RFX3P48380 749 aa14.13□□□□□ -0.15
COPS3-201ENST00000268717 HOXC5Q00444 222 aa14.13□□□□□ -0.15
COPS3-201ENST00000268717 TBC1D25Q3MII6 688 aa14.13□□□□□ -0.15
COPS3-201ENST00000268717 FOXB2Q5VYV0 432 aa14.13□□□□□ -0.15
COPS3-201ENST00000268717 TMEM205Q6UW68 189 aa14.13□□□□□ -0.15
COPS3-201ENST00000268717 RASSF6Q6ZTQ3 369 aa14.13□□□□□ -0.15
COPS3-201ENST00000268717 PRSS58Q8IYP2 241 aa14.13□□□□□ -0.15
COPS3-201ENST00000268717 APH1BQ8WW43 257 aa14.13□□□□□ -0.15
COPS3-201ENST00000268717 CNOT9Q92600 299 aaKnown RBP14.13□□□□□ -0.15
COPS3-201ENST00000268717 TP53INP1Q96A56 240 aa14.13□□□□□ -0.15
COPS3-201ENST00000268717 MPP4Q96JB8 637 aa14.13□□□□□ -0.15
COPS3-201ENST00000268717 HS6ST2Q96MM7 605 aa14.13□□□□□ -0.15
COPS3-201ENST00000268717 CCNL2Q96S94 520 aaPredicted RBP14.13□□□□□ -0.15
COPS3-201ENST00000268717 TUBA1CQ9BQE3 449 aa14.13□□□□□ -0.15
COPS3-201ENST00000268717 STRADBQ9C0K7 418 aa14.13□□□□□ -0.15
COPS3-201ENST00000268717 WWTR1Q9GZV5 400 aa14.13□□□□□ -0.15
COPS3-201ENST00000268717 EXOSC3Q9NQT5 275 aaKnown RBP14.13□□□□□ -0.15
COPS3-201ENST00000268717 IMPAD1Q9NX62 359 aa14.13□□□□□ -0.15
COPS3-201ENST00000268717 SLC7A7Q9UM01 511 aa14.13□□□□□ -0.15
COPS3-201ENST00000268717 PCDHGB1Q9Y5G3 927 aa14.13□□□□□ -0.15
COPS3-201ENST00000268717 AHCTF1Q8WYP5 2266 aa14.13□□□□□ -0.15
COPS3-201ENST00000268717 A0A0B4J2E0 115 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 A0A1B0GX12 115 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 PMS2P1A4D2B8 440 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 SH3D21A4FU49 640 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 CHP2O43745 196 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 GKN3PP0CG01 181 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 PRG2P13727 222 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 ENDOUP21128 410 aaKnown RBP14.12□□□□□ -0.15
COPS3-201ENST00000268717 STAT5AP42229 794 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 RBM34P42696 430 aaKnown RBP14.12□□□□□ -0.15
COPS3-201ENST00000268717 ACAA2P42765 397 aaKnown RBP14.12□□□□□ -0.15
COPS3-201ENST00000268717 EMP2P54851 167 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 RAB15P59190 212 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 SLC35A2P78381 396 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 EIF3IQ13347 325 aaKnown RBP14.12□□□□□ -0.15
COPS3-201ENST00000268717 FNDC7Q5VTL7 733 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 C12orf73Q69YU5 71 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 LANCL3Q6ZV70 420 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 P3H2Q8IVL5 708 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 NKAIN4Q8IVV8 208 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 SLC34A3Q8N130 599 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 CLDN22Q8N7P3 220 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 B3GNT7Q8NFL0 401 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 CMKLR1Q99788 373 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 PRSS27Q9BQR3 290 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 PRR14Q9BWN1 585 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 RBM38Q9H0Z9 239 aaKnown RBP14.12□□□□□ -0.15
COPS3-201ENST00000268717 SLC25A19Q9HC21 320 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 ASCL3Q9NQ33 180 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 A0A1W2PQD3 144 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 TBXA2RP21731 343 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 KRT20P35900 424 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 IDH2P48735 452 aaKnown RBP14.12□□□□□ -0.15
COPS3-201ENST00000268717 SNRPGP62308 76 aaKnown RBP14.12□□□□□ -0.15
COPS3-201ENST00000268717 NNATQ16517 81 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 ZNF517Q6ZMY9 492 aaPredicted RBP14.12□□□□□ -0.15
COPS3-201ENST00000268717 Q6ZPB1 254 aaPredicted RBP14.12□□□□□ -0.15
COPS3-201ENST00000268717 ZNF614Q8N883 585 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 NFAM1Q8NET5 270 aaPredicted RBP14.12□□□□□ -0.15
COPS3-201ENST00000268717 BPIFB6Q8NFQ5 453 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 OR4C3Q8NH37 302 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 OR8K3Q8NH51 312 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 SNIP1Q8TAD8 396 aaKnown RBP14.12□□□□□ -0.15
COPS3-201ENST00000268717 NUBPLQ8TB37 319 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 FGF11Q92914 225 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 DGCR14Q96DF8 476 aaKnown RBP14.12□□□□□ -0.15
COPS3-201ENST00000268717 ZPBPQ9BS86 351 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 ZNF226Q9NYT6 803 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 TMEM5Q9Y2B1 443 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 NTNG1Q9Y2I2 539 aa14.12□□□□□ -0.15
COPS3-201ENST00000268717 CHD6Q8TD26 2715 aa14.11□□□□□ -0.15
COPS3-201ENST00000268717 PTPRQQ9UMZ3 2332 aa14.11□□□□□ -0.15
COPS3-201ENST00000268717 H3BN98 237 aa14.11□□□□□ -0.15
COPS3-201ENST00000268717 SCDO00767 359 aa14.11□□□□□ -0.15
COPS3-201ENST00000268717 PLD2O14939 933 aa14.11□□□□□ -0.15
COPS3-201ENST00000268717 TSPAN2O60636 221 aa14.11□□□□□ -0.15
COPS3-201ENST00000268717 BCAS1O75363 584 aaPredicted RBP14.11□□□□□ -0.15
COPS3-201ENST00000268717 OR6B1O95007 311 aa14.11□□□□□ -0.15
COPS3-201ENST00000268717 CSTAP01040 98 aa14.11□□□□□ -0.15
COPS3-201ENST00000268717 KLK3P07288 261 aaPredicted RBP14.11□□□□□ -0.15
COPS3-201ENST00000268717 SLC5A2P31639 672 aa14.11□□□□□ -0.15
COPS3-201ENST00000268717 PNLIPRP2P54317 469 aa14.11□□□□□ -0.15
COPS3-201ENST00000268717 RAB11FIP2Q7L804 512 aa14.11□□□□□ -0.15
COPS3-201ENST00000268717 MRGPREQ86SM8 312 aa14.11□□□□□ -0.15
COPS3-201ENST00000268717 POGLUT1Q8NBL1 392 aa14.11□□□□□ -0.15
COPS3-201ENST00000268717 TMEM255BQ8WV15 326 aa14.11□□□□□ -0.15
COPS3-201ENST00000268717 TMEM239Q8WW34 195 aa14.11□□□□□ -0.15
COPS3-201ENST00000268717 NODALQ96S42 347 aa14.11□□□□□ -0.15
COPS3-201ENST00000268717 GPA33Q99795 319 aa14.11□□□□□ -0.15
COPS3-201ENST00000268717 CRB3Q9BUF7 120 aa14.11□□□□□ -0.15
COPS3-201ENST00000268717 ZNF426Q9BUY5 554 aa14.11□□□□□ -0.15
COPS3-201ENST00000268717 RASSF1Q9NS23 344 aa14.11□□□□□ -0.15
COPS3-201ENST00000268717 SNX5Q9Y5X3 404 aa14.11□□□□□ -0.15
COPS3-201ENST00000268717 A0A087WV48 116 aa14.1□□□□□ -0.15
COPS3-201ENST00000268717 CNOT3O75175 753 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms