RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 GATA6Q92908 595 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 SFXN2Q96NB2 322 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 MGLLQ99685 303 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 ARHGAP9Q9BRR9 750 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 PLEKHA1Q9HB21 404 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 FAM171A2A8MVW0 826 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 MAGEB3O15480 346 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 MT-ND5P03915 603 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 TACR3P29371 465 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 GRPRP30550 384 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 SRYQ05066 204 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 DHRS13Q6UX07 377 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 BPHLQ86WA6 291 aaPredicted RBP13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 ACBD7Q8N6N7 88 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 PNPLA2Q96AD5 504 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 POLE3Q9NRF9 147 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 ANKRD10Q9NXR5 420 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 BAIAP2Q9UQB8 552 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 A0A1W2PPL8 197 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 SH3D21A4FU49 640 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 CENPXA8MT69 81 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 PLOD2O00469 737 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 SLC22A1O15245 554 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 SLC6A9P48067 706 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 ERVK-25P63136 954 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 SMN1Q16637 294 aaKnown RBP13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 GDF7Q7Z4P5 450 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 WDR5BQ86VZ2 330 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 CALHM3Q86XJ0 350 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 SLC7A13Q8TCU3 470 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 TMEM255BQ8WV15 326 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 GPER1Q99527 375 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 TANC1Q9C0D5 1861 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 SPTBN2O15020 2390 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 IGKV1-8A0A0C4DH67 115 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 FAM183AA6NL82 134 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 PCBP4P57723 403 aaKnown RBP13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 ARG2P78540 354 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 TSPAN31Q12999 210 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 SPHARQ15513 63 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 OR7A5Q15622 319 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 LIPKQ5VXJ0 399 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 USP43Q70EL4 1123 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 CHERPQ8IWX8 916 aaKnown RBP13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 LNX2Q8N448 690 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 KCTD7Q96MP8 289 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 TCF7L1Q9HCS4 588 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 KCND3Q9UK17 655 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 RIF1Q5UIP0 2472 aaKnown RBP13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 CCDC163A0A0D9SF12 145 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 A0A1W2PPW3 197 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 TNFSF14O43557 240 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 TBX19O60806 448 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 SYNGR4O95473 234 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 IL33O95760 270 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 ITGAMP11215 1152 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 PPICP45877 212 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 RPS5P46782 204 aaKnown RBP13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 SSR4P51571 173 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 RAB15P59190 212 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 FAM199XQ6PEV8 388 aaPredicted RBP13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 RPTNQ6XPR3 784 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 TMPRSS9Q7Z410 1059 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 BCORP1Q8N888 145 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 OR13C2Q8NGS9 318 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 DIRAS2Q96HU8 199 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 NXF5Q9H1B4 397 aaKnown RBP13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 ERVMER34-1Q9H9K5 563 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 PCDHGB5Q9Y5G0 923 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 NPFFR2Q9Y5X5 522 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 CHD5Q8TDI0 1954 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 LOC110117498-PIK3R3F6TDL0 507 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 POU3F3P20264 500 aaPredicted RBP13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 VBP1P61758 197 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 TUBA3CQ13748 450 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 MFSD13AQ14CX5 517 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 MLC1Q15049 377 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 RSBN1Q5VWQ0 802 aaPredicted RBP13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 FAM131AQ6UXB0 335 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 NLGN4YQ8NFZ3 816 aaPredicted RBP13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 NXPE2Q96DL1 559 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 RNF121Q9H920 327 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 BCL2L10Q9HD36 194 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 TMEM9Q9P0T7 183 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 NTNG1Q9Y2I2 539 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 GPC6Q9Y625 555 aaPredicted RBP13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 HLA-DPB1P04440 258 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 HSD11B1P28845 292 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 AVPR2P30518 371 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 PYCR1P32322 319 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 NHSL2Q5HYW2 709 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 ZNF691Q5VV52 312 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 CPEB2Q7Z5Q1 589 aaKnown RBP13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 IZUMO1Q8IYV9 350 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 CHDHQ8NE62 594 aaPredicted RBP13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 SDR9C7Q8NEX9 313 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 GATAD2BQ8WXI9 593 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 THAP4Q8WY91 577 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 TM9SF2Q99805 663 aa13.39□□□□□ -0.27
PDLIM2-201ENST00000265810 COQ7Q99807 217 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms