RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 DHRS12A0PJE2 317 aa14.4□□□□□ -0.1
CCDC90B-201ENST00000260054 LRRC3CA6NJW4 275 aa14.4□□□□□ -0.1
CCDC90B-201ENST00000260054 EIF4E2O60573 245 aaKnown RBP14.4□□□□□ -0.1
CCDC90B-201ENST00000260054 TPST2O60704 377 aa14.4□□□□□ -0.1
CCDC90B-201ENST00000260054 ACAA2P42765 397 aaKnown RBP14.4□□□□□ -0.1
CCDC90B-201ENST00000260054 MASP1P48740 699 aa14.4□□□□□ -0.1
CCDC90B-201ENST00000260054 NPTX1Q15818 432 aa14.4□□□□□ -0.1
CCDC90B-201ENST00000260054 Q6ZS92 163 aa14.4□□□□□ -0.1
CCDC90B-201ENST00000260054 TMCO5AQ8N6Q1 288 aa14.4□□□□□ -0.1
CCDC90B-201ENST00000260054 EXD3Q8N9H8 876 aa14.4□□□□□ -0.1
CCDC90B-201ENST00000260054 TMEM178AQ8NBL3 297 aa14.4□□□□□ -0.1
CCDC90B-201ENST00000260054 B4GALNT2Q8NHY0 566 aa14.4□□□□□ -0.1
CCDC90B-201ENST00000260054 GEMIN6Q8WXD5 167 aaKnown RBP14.4□□□□□ -0.1
CCDC90B-201ENST00000260054 ZNF524Q96C55 264 aa14.4□□□□□ -0.1
CCDC90B-201ENST00000260054 SLC47A1Q96FL8 570 aa14.4□□□□□ -0.1
CCDC90B-201ENST00000260054 JSRP1Q96MG2 331 aaPredicted RBP14.4□□□□□ -0.1
CCDC90B-201ENST00000260054 ADNPQ9H2P0 1102 aa14.4□□□□□ -0.1
CCDC90B-201ENST00000260054 FBXL2Q9UKC9 423 aa14.4□□□□□ -0.1
CCDC90B-201ENST00000260054 PCDHGB6Q9Y5F9 930 aa14.4□□□□□ -0.1
CCDC90B-201ENST00000260054 AP3D1O14617 1153 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 ENTPD5O75356 428 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 RYKP34925 604 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 P2RX1P51575 399 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 CCR4P51679 360 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 RGS8P57771 180 aaPredicted RBP14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 EPS8Q12929 822 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 ZNF169Q14929 603 aaPredicted RBP14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 TIGD3Q6B0B8 471 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 TSEN54Q7Z6J9 526 aaKnown RBP14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 PLCZ1Q86YW0 608 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 FADS6Q8N9I5 356 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 OR2M3Q8NG83 312 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 SLC35B4Q969S0 331 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 SLCO4A1Q96BD0 722 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 RSRC1Q96IZ7 334 aaKnown RBP14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 C7orf34Q96L11 122 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 ZNF597Q96LX8 424 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 GNRHR2Q96P88 292 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 PRR14Q9BWN1 585 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 UGT2B28Q9BY64 529 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 MFRPQ9BY79 579 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 DSN1Q9H410 356 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 ANAPC2Q9UJX6 822 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 AURKCQ9UQB9 309 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 SLC9A8Q9Y2E8 581 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 HEATR5AQ86XA9 2040 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 KLRC4-KLRK1H3BQV0 150 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 DPM1O60762 260 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 SEMA7AO75326 666 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 GPIP06744 558 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 UMPSP11172 480 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 ELAVL4P26378 380 aaKnown RBP14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 RFC3P40938 356 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 MEOX1P50221 254 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 VLDLRP98155 873 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 KCNC4Q03721 635 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 IQCCQ4KMZ1 466 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 ZNF550Q7Z398 422 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 ZNF440Q8IYI8 595 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 OR1J4Q8NGS1 313 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 OR5W2Q8NH69 310 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 POP5Q969H6 163 aaKnown RBP14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 AMBRA1Q9C0C7 1298 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 MAGIXQ9H6Y5 334 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 NTNG1Q9Y2I2 539 aa14.39□□□□□ -0.11
CCDC90B-201ENST00000260054 PCNX3Q9H6A9 2034 aa14.38□□□□□ -0.11
CCDC90B-201ENST00000260054 hCG_2039718K7EN88 272 aa14.38□□□□□ -0.11
CCDC90B-201ENST00000260054 MT-ND1P03886 318 aa14.38□□□□□ -0.11
CCDC90B-201ENST00000260054 IFNW1P05000 195 aa14.38□□□□□ -0.11
CCDC90B-201ENST00000260054 RFPL3SP0C7P2 107 aa14.38□□□□□ -0.11
CCDC90B-201ENST00000260054 PSMA4P25789 261 aaKnown RBP14.38□□□□□ -0.11
CCDC90B-201ENST00000260054 HTR2AP28223 471 aa14.38□□□□□ -0.11
CCDC90B-201ENST00000260054 MSX1P28360 303 aa14.38□□□□□ -0.11
CCDC90B-201ENST00000260054 CHRNB3Q05901 458 aa14.38□□□□□ -0.11
CCDC90B-201ENST00000260054 TOMM34Q15785 309 aaPredicted RBP14.38□□□□□ -0.11
CCDC90B-201ENST00000260054 FAM98BQ52LJ0 330 aaKnown RBP14.38□□□□□ -0.11
CCDC90B-201ENST00000260054 DEF8Q6ZN54 512 aa14.38□□□□□ -0.11
CCDC90B-201ENST00000260054 TSPYL5Q86VY4 417 aaPredicted RBP14.38□□□□□ -0.11
CCDC90B-201ENST00000260054 ZFP62Q8NB50 900 aaPredicted RBP14.38□□□□□ -0.11
CCDC90B-201ENST00000260054 TOR1AIP2Q8NFQ8 470 aa14.38□□□□□ -0.11
CCDC90B-201ENST00000260054 OR4K17Q8NGC6 315 aa14.38□□□□□ -0.11
CCDC90B-201ENST00000260054 PHF10Q8WUB8 498 aaKnown RBP14.38□□□□□ -0.11
CCDC90B-201ENST00000260054 HHATLQ9HCP6 504 aa14.38□□□□□ -0.11
CCDC90B-201ENST00000260054 ZFP64Q9NPA5 681 aa14.38□□□□□ -0.11
CCDC90B-201ENST00000260054 IL1RAPQ9NPH3 570 aa14.38□□□□□ -0.11
CCDC90B-201ENST00000260054 CCM2LQ9NUG4 571 aaPredicted RBP14.38□□□□□ -0.11
CCDC90B-201ENST00000260054 BOKQ9UMX3 212 aaPredicted RBP14.38□□□□□ -0.11
CCDC90B-201ENST00000260054 B3GNT3Q9Y2A9 372 aa14.38□□□□□ -0.11
CCDC90B-201ENST00000260054 BSNQ9UPA5 3926 aa14.38□□□□□ -0.11
CCDC90B-201ENST00000260054 ANKUB1A6NFN9 424 aa14.37□□□□□ -0.11
CCDC90B-201ENST00000260054 NUDT14O95848 222 aa14.37□□□□□ -0.11
CCDC90B-201ENST00000260054 LINGO3P0C6S8 592 aa14.37□□□□□ -0.11
CCDC90B-201ENST00000260054 RAP2AP10114 183 aa14.37□□□□□ -0.11
CCDC90B-201ENST00000260054 MAGEA2P43356 314 aa14.37□□□□□ -0.11
CCDC90B-201ENST00000260054 SUMO3P55854 103 aaPredicted RBP14.37□□□□□ -0.11
CCDC90B-201ENST00000260054 NADK2Q4G0N4 442 aa14.37□□□□□ -0.11
CCDC90B-201ENST00000260054 SLC6A19Q695T7 634 aa14.37□□□□□ -0.11
CCDC90B-201ENST00000260054 ARSKQ6UWY0 536 aa14.37□□□□□ -0.11
CCDC90B-201ENST00000260054 ZDHHC21Q8IVQ6 265 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms