RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 CRHP06850 196 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 HOXB9P17482 250 aaPredicted RBP11.51□□□□□ -0.57
VPREB3-201ENST00000248948 BMP5P22003 454 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 ME2P23368 584 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 CTSSP25774 331 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 MVDP53602 400 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 CASP9P55211 416 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 RAC1P63000 192 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 FOXF1Q12946 379 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 GPAT3Q53EU6 434 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 LRIF1Q5T3J3 769 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 POMZP3Q6PJE2 187 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 LRRC74BQ6ZQY2 392 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 EIF3MQ7L2H7 374 aaKnown RBP11.51□□□□□ -0.57
VPREB3-201ENST00000248948 LIX1LQ8IVB5 337 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 CMIPQ8IY22 773 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 TMCO5AQ8N6Q1 288 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 OR5M1Q8NGP8 315 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 OR5W2Q8NH69 310 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 PNPT1Q8TCS8 783 aaKnown RBP11.51□□□□□ -0.57
VPREB3-201ENST00000248948 GTF2H4Q92759 462 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 SPDL1Q96EA4 605 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 MRGPRX4Q96LA9 322 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 TRIM8Q9BZR9 551 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 UCK2Q9BZX2 261 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 RAD21L1Q9H4I0 556 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 TPT1P8Q9HAU6 139 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 NPHS2Q9NP85 383 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 EXOSC3Q9NQT5 275 aaKnown RBP11.51□□□□□ -0.57
VPREB3-201ENST00000248948 SLC6A13Q9NSD5 602 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 MRGBPQ9NV56 204 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 CCDC167Q9P0B6 97 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 KCNE5Q9UJ90 142 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 MKLN1Q9UL63 735 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 DSPPQ9NZW4 1301 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 DCHS2Q6V1P9 2916 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 CACNA1DQ01668 2161 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 NOTCH2Q04721 2471 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 A0A096LPI6 279 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 PRAMEF27A3QJZ7 478 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 SHISA8B8ZZ34 492 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 OIP5O43482 229 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 ATP8B1O43520 1251 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 NTN1O95631 604 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 NUDT14O95848 222 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 CSTAP01040 98 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 C1QCP02747 245 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 CHRM4P08173 479 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 PRKCAP17252 672 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 RPS4Y1P22090 263 aaKnown RBP11.5□□□□□ -0.57
VPREB3-201ENST00000248948 SUCLG1P53597 346 aaKnown RBP11.5□□□□□ -0.57
VPREB3-201ENST00000248948 CLDN15P56746 228 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 CLDN20P56880 219 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 DSTNP60981 165 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 FADDQ13158 208 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 SELENBP1Q13228 472 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 SLC25A53Q5H9E4 307 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 COX20Q5RI15 118 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 SLC2A7Q6PXP3 512 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 MEX3BQ6ZN04 569 aaKnown RBP11.5□□□□□ -0.57
VPREB3-201ENST00000248948 ESPNLQ6ZVH7 1005 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 P4HA3Q7Z4N8 544 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 FUNDC1Q8IVP5 155 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 MCEMP1Q8IX19 187 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 POC1BQ8TC44 478 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 ST8SIA1Q92185 356 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 SMPDL3BQ92485 455 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 C14orf79Q96F83 325 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 ADGRG7Q96K78 797 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 LAT2Q9GZY6 243 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 PAIP1Q9H074 479 aaKnown RBP11.5□□□□□ -0.57
VPREB3-201ENST00000248948 SLC38A1Q9H2H9 487 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 ZNF385DQ9H6B1 395 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 CCDC134Q9H6E4 229 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 RNF122Q9H9V4 155 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 CALML5Q9NZT1 146 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 GMEB1Q9Y692 573 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 FBN2P35556 2912 aa11.5□□□□□ -0.57
VPREB3-201ENST00000248948 LRBAP50851 2863 aa11.49□□□□□ -0.57
VPREB3-201ENST00000248948 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.49□□□□□ -0.57
VPREB3-201ENST00000248948 AGAP5A6NIR3 686 aa11.49□□□□□ -0.57
VPREB3-201ENST00000248948 GJE1A6NN92 205 aa11.49□□□□□ -0.57
VPREB3-201ENST00000248948 EIF1AYO14602 144 aaKnown RBP11.49□□□□□ -0.57
VPREB3-201ENST00000248948 ADAMDEC1O15204 470 aa11.49□□□□□ -0.57
VPREB3-201ENST00000248948 TROVE2P10155 538 aaKnown RBP eCLIP11.49□□□□□ -0.57
VPREB3-201ENST00000248948 NR2F1P10589 423 aa11.49□□□□□ -0.57
VPREB3-201ENST00000248948 BMP2P12643 396 aa11.49□□□□□ -0.57
VPREB3-201ENST00000248948 CAPN3P20807 821 aa11.49□□□□□ -0.57
VPREB3-201ENST00000248948 PPIBP23284 216 aaKnown RBP11.49□□□□□ -0.57
VPREB3-201ENST00000248948 SSTR2P30874 369 aa11.49□□□□□ -0.57
VPREB3-201ENST00000248948 PGM1P36871 562 aa11.49□□□□□ -0.57
VPREB3-201ENST00000248948 SLC6A8P48029 635 aa11.49□□□□□ -0.57
VPREB3-201ENST00000248948 CCR4P51679 360 aa11.49□□□□□ -0.57
VPREB3-201ENST00000248948 CRISP3P54108 245 aa11.49□□□□□ -0.57
VPREB3-201ENST00000248948 DLX5P56178 289 aa11.49□□□□□ -0.57
VPREB3-201ENST00000248948 SORDQ00796 357 aa11.49□□□□□ -0.57
VPREB3-201ENST00000248948 CHRNEQ04844 493 aa11.49□□□□□ -0.57
VPREB3-201ENST00000248948 GNA13Q14344 377 aa11.49□□□□□ -0.57
VPREB3-201ENST00000248948 QPRTQ15274 297 aa11.49□□□□□ -0.57
VPREB3-201ENST00000248948 MAPK14Q16539 360 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms