RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 LIMS4P0CW20 117 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 SHC1P29353 583 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 CRMP1Q14194 572 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 INSL4Q14641 139 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 TATDN3Q17R31 274 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 EOGTQ5NDL2 527 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 COMTD1Q86VU5 262 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 FRMD1Q8N878 549 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 ARHGAP9Q9BRR9 750 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 FGF20Q9NP95 211 aaPredicted RBP13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 PRTFDC1Q9NRG1 225 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 PNO1Q9NRX1 252 aaKnown RBP13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 HSPB11Q9Y547 144 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 N6AMT1Q9Y5N5 214 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 GXYLT2A0PJZ3 443 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 SURF4O15260 269 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 FLRT2O43155 660 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 FGF17O60258 216 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 PBX2P40425 430 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 HTR3AP46098 478 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 ERV3-1Q14264 604 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 ZIC1Q15915 447 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 ZNF322Q6U7Q0 402 aaPredicted RBP13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 PAMR1Q6UXH9 720 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 LINGO2Q7L985 606 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 VN1R4Q7Z5H5 301 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 PAQR7Q86WK9 346 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 IZUMO1Q8IYV9 350 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 FAM3CQ92520 227 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 MAN2C1Q9NTJ4 1040 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 PCDHGB7Q9Y5F8 929 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 ALPK2Q86TB3 2170 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 HMX3A6NHT5 357 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 KHDRBS3O75525 346 aaKnown RBP13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 EGFP01133 1207 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 RNH1P13489 461 aaKnown RBP13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 TNFRSF4P43489 277 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 BLKP51451 505 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 C9orf50Q5SZB4 431 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 QSOX2Q6ZRP7 698 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 UBQLNLQ8IYU4 475 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 SP7Q8TDD2 431 aaPredicted RBP13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 SMPDL3BQ92485 455 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 SLC6A18Q96N87 628 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 KCMF1Q9P0J7 381 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 FBXL21Q9UKT6 434 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 TMA7Q9Y2S6 64 aaKnown RBP13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 BPTFQ12830 3046 aa13.9□□□□□ -0.18
UBE2D4-201ENST00000222402 DSPPQ9NZW4 1301 aa13.9□□□□□ -0.19
UBE2D4-201ENST00000222402 A6NL46 340 aa13.9□□□□□ -0.19
UBE2D4-201ENST00000222402 PSMD9O00233 223 aa13.9□□□□□ -0.19
UBE2D4-201ENST00000222402 RNF13O43567 381 aa13.9□□□□□ -0.19
UBE2D4-201ENST00000222402 PLRG1O43660 514 aaKnown RBP13.9□□□□□ -0.19
UBE2D4-201ENST00000222402 CSF3P09919 207 aa13.9□□□□□ -0.19
UBE2D4-201ENST00000222402 CD79BP40259 229 aa13.9□□□□□ -0.19
UBE2D4-201ENST00000222402 ZNF550Q7Z398 422 aa13.9□□□□□ -0.19
UBE2D4-201ENST00000222402 IL17RDQ8NFM7 739 aa13.9□□□□□ -0.19
UBE2D4-201ENST00000222402 CNOT9Q92600 299 aaKnown RBP13.9□□□□□ -0.19
UBE2D4-201ENST00000222402 PIGKQ92643 395 aa13.9□□□□□ -0.19
UBE2D4-201ENST00000222402 TNFRSF13CQ96RJ3 184 aa13.9□□□□□ -0.19
UBE2D4-201ENST00000222402 GPR174Q9BXC1 333 aa13.9□□□□□ -0.19
UBE2D4-201ENST00000222402 ACAD8Q9UKU7 415 aa13.9□□□□□ -0.19
UBE2D4-201ENST00000222402 SCML1Q9UN30 329 aa13.9□□□□□ -0.19
UBE2D4-201ENST00000222402 BRWD1Q9NSI6 2320 aa13.89□□□□□ -0.19
UBE2D4-201ENST00000222402 TRBV2A0A0J9YWF9 115 aa13.89□□□□□ -0.19
UBE2D4-201ENST00000222402 A0A0J9YY10 115 aa13.89□□□□□ -0.19
UBE2D4-201ENST00000222402 FAM172BPA6NC97 362 aa13.89□□□□□ -0.19
UBE2D4-201ENST00000222402 FAM171A2A8MVW0 826 aa13.89□□□□□ -0.19
UBE2D4-201ENST00000222402 C4orf51C9J302 202 aa13.89□□□□□ -0.19
UBE2D4-201ENST00000222402 LINC01565O15544 149 aa13.89□□□□□ -0.19
UBE2D4-201ENST00000222402 EML2O95834 649 aa13.89□□□□□ -0.19
UBE2D4-201ENST00000222402 FBXW4P57775 412 aa13.89□□□□□ -0.19
UBE2D4-201ENST00000222402 FOXK2Q01167 660 aa13.89□□□□□ -0.19
UBE2D4-201ENST00000222402 MAB21L1Q13394 359 aa13.89□□□□□ -0.19
UBE2D4-201ENST00000222402 MRM1Q6IN84 353 aaKnown RBP13.89□□□□□ -0.19
UBE2D4-201ENST00000222402 ARHGAP11AQ6P4F7 1023 aa13.89□□□□□ -0.19
UBE2D4-201ENST00000222402 FGD2Q7Z6J4 655 aa13.89□□□□□ -0.19
UBE2D4-201ENST00000222402 UBE2Q1Q7Z7E8 422 aa13.89□□□□□ -0.19
UBE2D4-201ENST00000222402 TMEM99Q8N816 258 aa13.89□□□□□ -0.19
UBE2D4-201ENST00000222402 SMAP2Q8WU79 429 aaPredicted RBP13.89□□□□□ -0.19
UBE2D4-201ENST00000222402 ACOT12Q8WYK0 555 aa13.89□□□□□ -0.19
UBE2D4-201ENST00000222402 ARHGDIGQ99819 225 aa13.89□□□□□ -0.19
UBE2D4-201ENST00000222402 POLMQ9NP87 494 aaPredicted RBP13.89□□□□□ -0.19
UBE2D4-201ENST00000222402 SPATA2Q9UM82 520 aa13.89□□□□□ -0.19
UBE2D4-201ENST00000222402 IER3IP1Q9Y5U9 82 aa13.89□□□□□ -0.19
UBE2D4-201ENST00000222402 NARSO43776 548 aaKnown RBP13.89□□□□□ -0.19
UBE2D4-201ENST00000222402 NID1P14543 1247 aa13.89□□□□□ -0.19
UBE2D4-201ENST00000222402 FRKP42685 505 aaPredicted RBP13.89□□□□□ -0.19
UBE2D4-201ENST00000222402 CD300LDQ6UXZ3 194 aa13.89□□□□□ -0.19
UBE2D4-201ENST00000222402 TRMT10AQ8TBZ6 339 aaKnown RBP13.89□□□□□ -0.19
UBE2D4-201ENST00000222402 SGTBQ96EQ0 304 aa13.89□□□□□ -0.19
UBE2D4-201ENST00000222402 TAPBPLQ9BX59 468 aa13.89□□□□□ -0.19
UBE2D4-201ENST00000222402 FBRSQ9HAH7 460 aa13.89□□□□□ -0.19
UBE2D4-201ENST00000222402 SLC35A3Q9Y2D2 325 aa13.89□□□□□ -0.19
UBE2D4-201ENST00000222402 CTSVO60911 334 aa13.89□□□□□ -0.19
UBE2D4-201ENST00000222402 SLC25A12O75746 678 aa13.89□□□□□ -0.19
UBE2D4-201ENST00000222402 RECKO95980 971 aa13.89□□□□□ -0.19
UBE2D4-201ENST00000222402 THEGLP0DJG4 465 aa13.89□□□□□ -0.19
UBE2D4-201ENST00000222402 CHRNB1P11230 501 aa13.89□□□□□ -0.19
UBE2D4-201ENST00000222402 RAB3BP20337 219 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms