RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Trim3Q9R1R2 744 aa10.83□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Asb3Q9WV72 525 aa10.83□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Cd209fD3Z1H5 274 aa10.83□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Adap1E9PY16 374 aa10.83□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Tmem44E9Q4M0 433 aa10.83□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Pcdh1F7BJK1 1077 aa10.83□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Gpr31F8VQN3 319 aa10.83□□□□□ -0.68
Col9a1-202ENSMUST00000088349 S100a2J3QMC7 104 aa10.83□□□□□ -0.68
Col9a1-202ENSMUST00000088349 RrhO35214 337 aa10.83□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Nckap1P28660 1128 aaKnown RBP10.83□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Sstr2P30875 369 aa10.83□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Hoxa2P31245 372 aa10.83□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Ly6dP35459 127 aa10.83□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Thbs2Q03350 1172 aa10.83□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Sox9Q04887 507 aa10.83□□□□□ -0.68
Col9a1-202ENSMUST00000088349 HbegfQ06186 208 aa10.83□□□□□ -0.68
Col9a1-202ENSMUST00000088349 FuzQ3UYI6 415 aa10.83□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Foxs1Q61574 329 aa10.83□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Pabpc2Q62029 628 aa10.83□□□□□ -0.68
Col9a1-202ENSMUST00000088349 ManeaQ6NXH2 462 aa10.83□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Mfsd4aQ6PDC8 510 aa10.83□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Lrrc75bQ7TPD7 306 aa10.83□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Pum2Q80U58 1066 aaKnown RBP10.83□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Carnmt1Q80UY1 400 aa10.83□□□□□ -0.68
Col9a1-202ENSMUST00000088349 SnupnQ80W37 358 aa10.83□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Atg4bQ8BGE6 393 aa10.83□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Mfsd11Q8BJ51 449 aa10.83□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Slc9a8Q8R4D1 576 aa10.83□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Olfr853Q8VGG6 305 aa10.83□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Pdzk1ip1Q9CQH0 114 aa10.83□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Nkiras2Q9CR56 191 aa10.83□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Chp2Q9D869 196 aa10.83□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Clca3a2Q9EQR4 902 aa10.83□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Lmx1aQ9JKU8 382 aa10.83□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Arpc3Q9JM76 178 aaKnown RBP10.83□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Zfp68Q9Z116 606 aa10.83□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Slc37a4A0A1L1SUI3 450 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Slc9a6A1L3P4 702 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 1700023F06RikA2AB62 382 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Ajap1A2ALI5 412 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Wdr76A6PWY4 622 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Mthfd2lD3YZG8 338 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Olfr653E9PVA0 317 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Vmn2r109K7N747 858 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Tcf3P15806 651 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Nr2f6P43136 390 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Eif4eP63073 217 aaKnown RBP10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Rnf149Q3U2C5 394 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Ffar3Q3UFD7 319 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Diras2Q5PR73 199 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Acvr1bQ61271 505 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 DmknQ6P253 517 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Efcab3Q80X60 432 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Dlec1Q8BLA1 635 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Rtn4rl1Q8K0S5 445 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Dcun1d3Q8K0V2 304 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Spns1Q8R0G7 528 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Q8R2K8 148 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Olfr686Q8VGX3 317 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Ces2cQ91WG0 561 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Ankrd10Q99LW0 415 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Med18Q9CZ82 208 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Acad8Q9D7B6 413 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Prss52Q9D9M0 321 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Olfr705Q9EPF7 316 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 TrdcA0A0G2JEU3 153 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Gm4779A0A1B0GR91 561 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Gm14399A2ARW8 610 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Pgm2A2CEK3 580 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Rasd1O35626 280 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Clk1P22518 483 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Mc3rP33033 323 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Cnr2P47936 347 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Rab33aP97950 237 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 AmbpQ07456 349 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Brf2Q3UAW9 420 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Itpripl2Q3UV16 535 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 RflnbQ5SVD0 216 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Adh7Q64437 374 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Olfr298Q7TS06 332 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Olfr70Q80ZX9 316 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Slc9a7Q8BLV3 726 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 DpcdQ8BPA8 203 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 PiguQ8K358 434 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Zdhhc5Q8VDZ4 715 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Olfr1232Q8VEX7 311 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Olfr821Q8VG45 310 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Uxs1Q91XL3 420 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Fgf20Q9ESL9 211 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Lgi1Q9JIA1 557 aa10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Ybx2Q9Z2C8 360 aaKnown RBP10.82□□□□□ -0.68
Col9a1-202ENSMUST00000088349 AtmQ62388 3066 aa10.81□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Gm13420A0A140LJJ2 248 aa10.81□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Gm4924A0A1B0GR71 966 aa10.81□□□□□ -0.68
Col9a1-202ENSMUST00000088349 SpaarA0A1B0GSZ0 75 aa10.81□□□□□ -0.68
Col9a1-202ENSMUST00000088349 TmppeD3Z286 447 aa10.81□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Olfr723E9PZU2 309 aa10.81□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Ccdc149F6V035 524 aa10.81□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Olfr724K7N5X7 309 aa10.81□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Gm7970L7N271 213 aa10.81□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 34.5 ms