RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 FBXW4P57775 412 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 KRTAP10-9P60411 292 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 ACTR3P61158 418 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 EFR3AQ14156 821 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 GRAMD1BQ3KR37 738 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 LIN52Q52LA3 116 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 CYBRD1Q53TN4 286 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 LYPD8Q6UX82 237 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 ARMC8Q8IUR7 673 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 PEX5LQ8IYB4 626 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 EID3Q8N140 333 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 BEST3Q8N1M1 668 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 ARMC10Q8N2F6 343 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 SLC15A4Q8N697 577 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 ZNF614Q8N883 585 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 SMYD1Q8NB12 490 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 OR52E4Q8NGH9 312 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 SPPL2AQ8TCT8 520 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 ASB15Q8WXK1 588 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 RSRC1Q96IZ7 334 aaKnown RBP8.6□□□□□ -1.03
PHGDH-228ENST00000641847 ZNF354BQ96LW1 612 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 SPATA5L1Q9BVQ7 753 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 SAP130Q9H0E3 1048 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 DENND2DQ9H6A0 471 aaPredicted RBP8.6□□□□□ -1.03
PHGDH-228ENST00000641847 TRIM45Q9H8W5 580 aaPredicted RBP8.6□□□□□ -1.03
PHGDH-228ENST00000641847 ABI3Q9P2A4 366 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 SEC14L3Q9UDX4 400 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 TEKT2Q9UIF3 430 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 RPS6KA6Q9UK32 745 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 SAMD4AQ9UPU9 718 aaKnown RBP8.6□□□□□ -1.03
PHGDH-228ENST00000641847 ZNF443Q9Y2A4 671 aaPredicted RBP8.6□□□□□ -1.03
PHGDH-228ENST00000641847 YARS2Q9Y2Z4 477 aaKnown RBP8.6□□□□□ -1.03
PHGDH-228ENST00000641847 RRP15Q9Y3B9 282 aaKnown RBP8.6□□□□□ -1.03
PHGDH-228ENST00000641847 NPFFR2Q9Y5X5 522 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 V9GYQ6 96 aa8.6□□□□□ -1.03
PHGDH-228ENST00000641847 AGAP5A6NIR3 686 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 AQP12BA6NM10 295 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 M0QX08 132 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 SCDO00767 359 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 UGT2B17O75795 530 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 MFN2O95140 757 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 CRYABP02511 175 aaKnown RBP8.59□□□□□ -1.03
PHGDH-228ENST00000641847 DBIP07108 87 aaKnown RBP8.59□□□□□ -1.03
PHGDH-228ENST00000641847 C8BP07358 591 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 THBS1P07996 1170 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 PABPC4LP0CB38 370 aaKnown RBP8.59□□□□□ -1.03
PHGDH-228ENST00000641847 NAGAP17050 411 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 CD247P20963 164 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 LCN1P31025 176 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 PRKAR1BP31321 381 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 CA7P43166 264 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 ST13P50502 369 aaKnown RBP8.59□□□□□ -1.03
PHGDH-228ENST00000641847 PNLIPRP2P54317 469 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 ATP12AP54707 1039 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 DMTNQ08495 405 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 INAQ16352 499 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 MAPK14Q16539 360 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 NTRK2Q16620 822 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 ZNF311Q5JNZ3 666 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 ACER2Q5QJU3 275 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 PDZK1Q5T2W1 519 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 ABHD17BQ5VST6 288 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 DESI1Q6ICB0 168 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 OPN5Q6U736 354 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 IGFL2Q6UWQ7 119 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 ENPP6Q6UWR7 440 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 ZNF836Q6ZNA1 936 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 LINC00696Q6ZRV3 163 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 CBLL1Q75N03 491 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 EIF3MQ7L2H7 374 aaKnown RBP8.59□□□□□ -1.03
PHGDH-228ENST00000641847 VRK2Q86Y07 508 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 AQP12AQ8IXF9 295 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 DND1Q8IYX4 353 aaKnown RBP8.59□□□□□ -1.03
PHGDH-228ENST00000641847 TMEM156Q8N614 296 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 ZNF527Q8NB42 609 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 OR10G3Q8NGC4 313 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 OR5M3Q8NGP4 307 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 OR52P1PQ8NH57 321 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 SLC26A7Q8TE54 656 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 RASSF5Q8WWW0 418 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 NANOS1Q8WY41 292 aaKnown RBP8.59□□□□□ -1.03
PHGDH-228ENST00000641847 NR4A3Q92570 626 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 HGDQ93099 445 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 SPACA9Q96E40 222 aaPredicted RBP8.59□□□□□ -1.03
PHGDH-228ENST00000641847 TPD52L3Q96J77 140 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 HSH2DQ96JZ2 352 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 PINK1Q9BXM7 581 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 HOXD1Q9GZZ0 328 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 MTHFD2LQ9H903 347 aaPredicted RBP8.59□□□□□ -1.03
PHGDH-228ENST00000641847 UBQLN4Q9NRR5 601 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 DCAF13Q9NV06 445 aaKnown RBP8.59□□□□□ -1.03
PHGDH-228ENST00000641847 HPF1Q9NWY4 346 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 ADPRHL2Q9NX46 363 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 KCNE5Q9UJ90 142 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 IFT52Q9Y366 437 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 CSAG2Q9Y5P2 127 aa8.59□□□□□ -1.03
PHGDH-228ENST00000641847 TCRBV3S1A0A5B6 114 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 DHRS12A0PJE2 317 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 PRAMEF25A6NGN4 478 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 NPIPB9F8W1W9 429 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms