RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 MALRD1Q5VYJ5 2156 aa13.01□□□□□ -0.33
PNKP-218ENST00000625299 PLCE1Q9P212 2302 aa13□□□□□ -0.33
PNKP-218ENST00000625299 ZNF814B7Z6K7 855 aa13□□□□□ -0.33
PNKP-218ENST00000625299 LMX1BO60663 402 aa13□□□□□ -0.33
PNKP-218ENST00000625299 YES1P07947 543 aa13□□□□□ -0.33
PNKP-218ENST00000625299 SBK3P0C264 359 aa13□□□□□ -0.33
PNKP-218ENST00000625299 IGHV4-31P0DP07 118 aa13□□□□□ -0.33
PNKP-218ENST00000625299 COL6A2P12110 1019 aa13□□□□□ -0.33
PNKP-218ENST00000625299 GSTM5P46439 218 aa13□□□□□ -0.33
PNKP-218ENST00000625299 PRIM2P49643 509 aa13□□□□□ -0.33
PNKP-218ENST00000625299 RNF144AP50876 292 aaPredicted RBP13□□□□□ -0.33
PNKP-218ENST00000625299 RAB35Q15286 201 aa13□□□□□ -0.33
PNKP-218ENST00000625299 UNC50Q53HI1 259 aa13□□□□□ -0.33
PNKP-218ENST00000625299 GALNT18Q6P9A2 607 aa13□□□□□ -0.33
PNKP-218ENST00000625299 ZNF551Q7Z340 670 aaPredicted RBP13□□□□□ -0.33
PNKP-218ENST00000625299 B4GALNT2Q8NHY0 566 aa13□□□□□ -0.33
PNKP-218ENST00000625299 ACTRT2Q8TDY3 377 aa13□□□□□ -0.33
PNKP-218ENST00000625299 FAM168AQ92567 244 aa13□□□□□ -0.33
PNKP-218ENST00000625299 ZNF382Q96SR6 550 aa13□□□□□ -0.33
PNKP-218ENST00000625299 USB1Q9BQ65 265 aaKnown RBP13□□□□□ -0.33
PNKP-218ENST00000625299 KCNF1Q9H3M0 494 aa13□□□□□ -0.33
PNKP-218ENST00000625299 ACSS3Q9H6R3 686 aa13□□□□□ -0.33
PNKP-218ENST00000625299 HHATLQ9HCP6 504 aa13□□□□□ -0.33
PNKP-218ENST00000625299 NPAP1Q9NZP6 1156 aa13□□□□□ -0.33
PNKP-218ENST00000625299 ESYT3A0FGR9 886 aa12.99□□□□□ -0.33
PNKP-218ENST00000625299 ELOA3DA6NLF2 546 aaPredicted RBP12.99□□□□□ -0.33
PNKP-218ENST00000625299 C9JVG2 144 aa12.99□□□□□ -0.33
PNKP-218ENST00000625299 SCDO00767 359 aa12.99□□□□□ -0.33
PNKP-218ENST00000625299 NUDT14O95848 222 aa12.99□□□□□ -0.33
PNKP-218ENST00000625299 PRPS2P11908 318 aa12.99□□□□□ -0.33
PNKP-218ENST00000625299 IGFBP5P24593 272 aa12.99□□□□□ -0.33
PNKP-218ENST00000625299 TTKP33981 857 aa12.99□□□□□ -0.33
PNKP-218ENST00000625299 MANFP55145 182 aaKnown RBP12.99□□□□□ -0.33
PNKP-218ENST00000625299 SPOCK1Q08629 439 aa12.99□□□□□ -0.33
PNKP-218ENST00000625299 IMPG1Q17R60 797 aa12.99□□□□□ -0.33
PNKP-218ENST00000625299 ELOA3BQ3SY89 546 aa12.99□□□□□ -0.33
PNKP-218ENST00000625299 TMEM176BQ3YBM2 270 aaPredicted RBP12.99□□□□□ -0.33
PNKP-218ENST00000625299 VPS26BQ4G0F5 336 aa12.99□□□□□ -0.33
PNKP-218ENST00000625299 ZNF678Q5SXM1 525 aa12.99□□□□□ -0.33
PNKP-218ENST00000625299 FAM71E1Q6IPT2 247 aa12.99□□□□□ -0.33
PNKP-218ENST00000625299 SLC22A25Q6T423 547 aa12.99□□□□□ -0.33
PNKP-218ENST00000625299 Q6ZT83 130 aa12.99□□□□□ -0.33
PNKP-218ENST00000625299 ZAR1Q86SH2 424 aa12.99□□□□□ -0.33
PNKP-218ENST00000625299 FBXL14Q8N1E6 418 aa12.99□□□□□ -0.33
PNKP-218ENST00000625299 ELOA3Q8NG57 546 aa12.99□□□□□ -0.33
PNKP-218ENST00000625299 ZNF775Q96BV0 537 aaPredicted RBP12.99□□□□□ -0.33
PNKP-218ENST00000625299 OTUB1Q96FW1 271 aaPredicted RBP12.99□□□□□ -0.33
PNKP-218ENST00000625299 TMEM237Q96Q45 408 aa12.99□□□□□ -0.33
PNKP-218ENST00000625299 CBLN4Q9NTU7 201 aa12.99□□□□□ -0.33
PNKP-218ENST00000625299 NINJ2Q9NZG7 142 aa12.99□□□□□ -0.33
PNKP-218ENST00000625299 KCNS2Q9ULS6 477 aa12.99□□□□□ -0.33
PNKP-218ENST00000625299 TTC36A6NLP5 189 aa12.98□□□□□ -0.33
PNKP-218ENST00000625299 GJE1A6NN92 205 aa12.98□□□□□ -0.33
PNKP-218ENST00000625299 E7EQL1 145 aa12.98□□□□□ -0.33
PNKP-218ENST00000625299 NKX2-2O95096 273 aa12.98□□□□□ -0.33
PNKP-218ENST00000625299 LINGO3P0C6S8 592 aa12.98□□□□□ -0.33
PNKP-218ENST00000625299 GGT1P19440 569 aa12.98□□□□□ -0.33
PNKP-218ENST00000625299 TAC1P20366 129 aa12.98□□□□□ -0.33
PNKP-218ENST00000625299 ENPP1P22413 925 aa12.98□□□□□ -0.33
PNKP-218ENST00000625299 EIF1P41567 113 aaKnown RBP12.98□□□□□ -0.33
PNKP-218ENST00000625299 CD226Q15762 336 aa12.98□□□□□ -0.33
PNKP-218ENST00000625299 CCNJQ5T5M9 372 aa12.98□□□□□ -0.33
PNKP-218ENST00000625299 C11orf71Q6IPW1 123 aa12.98□□□□□ -0.33
PNKP-218ENST00000625299 MISPQ8IVT2 679 aa12.98□□□□□ -0.33
PNKP-218ENST00000625299 MUC15Q8N387 334 aa12.98□□□□□ -0.33
PNKP-218ENST00000625299 FBXO27Q8NI29 283 aa12.98□□□□□ -0.33
PNKP-218ENST00000625299 PAFAH2Q99487 392 aa12.98□□□□□ -0.33
PNKP-218ENST00000625299 DHRS9Q9BPW9 319 aa12.98□□□□□ -0.33
PNKP-218ENST00000625299 CXorf36Q9H7Y0 433 aa12.98□□□□□ -0.33
PNKP-218ENST00000625299 L2HGDHQ9H9P8 463 aa12.98□□□□□ -0.33
PNKP-218ENST00000625299 MYNNQ9NPC7 610 aa12.98□□□□□ -0.33
PNKP-218ENST00000625299 CCDC151A5D8V7 595 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 TRIM49D1C9J1S8 452 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 POC1B-GALNT4F8VUJ3 575 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 ZNF195O14628 629 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 KCNK2O95069 426 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 ENO1P06733 434 aaKnown RBP12.97□□□□□ -0.33
PNKP-218ENST00000625299 NGFRP08138 427 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 ACP2P11117 423 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 USF1P22415 310 aaPredicted RBP12.97□□□□□ -0.33
PNKP-218ENST00000625299 IGHV1-2P23083 117 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 EDNRAP25101 427 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 ELK4P28324 431 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 OR3A2P47893 321 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 SERPINB9P50453 376 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 FABP6P51161 128 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 ZNF83P51522 516 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 LSM11P83369 360 aaKnown RBP eCLIP12.97□□□□□ -0.33
PNKP-218ENST00000625299 ZNF117Q03924 483 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 CHRNEQ04844 493 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 GGTLC2Q14390 218 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 TIMM23BQ5SRD1 257 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 FAM120AOSQ5T036 256 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 FAM166AQ6J272 317 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 ANKRD26P1Q6NSI1 321 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 Q6ZSR9 355 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 TMEM151AQ8N4L1 468 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 CDRT4Q8N9R6 151 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 NUP43Q8NFH3 380 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 OR52N5Q8NH56 324 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms