RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 GKN3PP0CG01 181 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 ANPEPP15144 967 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 RHCEP18577 417 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 PTGDSP41222 190 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 ACAA2P42765 397 aaKnown RBP7.34□□□□□ -1.23
CPNE3-209ENST00000620393 ST13P50502 369 aaKnown RBP7.34□□□□□ -1.23
CPNE3-209ENST00000620393 RNF144AP50876 292 aaPredicted RBP7.34□□□□□ -1.23
CPNE3-209ENST00000620393 GAS1P54826 345 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 VLDLRP98155 873 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 PLAURQ03405 335 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 TLE3Q04726 772 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 C17orf67Q0P5P2 114 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 MFAP5Q13361 173 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 RCN1Q15293 331 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 CD226Q15762 336 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 NPTX1Q15818 432 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 SLC30A6Q6NXT4 461 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 INO80CQ6PI98 192 aaPredicted RBP7.34□□□□□ -1.23
CPNE3-209ENST00000620393 RTL4Q6ZR62 310 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 LINC00696Q6ZRV3 163 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 ERMP1Q7Z2K6 904 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 ZNF227Q86WZ6 799 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 ZNF440Q8IYI8 595 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 LILRA2Q8N149 483 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 PQLC1Q8N2U9 271 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 FAM71CQ8NEG0 241 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 FDCSPQ8NFU4 85 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 VANGL1Q8TAA9 524 aaPredicted RBP7.34□□□□□ -1.23
CPNE3-209ENST00000620393 LRTOMTQ8WZ04 291 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 HAS2Q92819 552 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 ZNF300Q96RE9 604 aaPredicted RBP7.34□□□□□ -1.23
CPNE3-209ENST00000620393 ZNF347Q96SE7 839 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 PKP2Q99959 881 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 UTP23Q9BRU9 249 aaKnown RBP7.34□□□□□ -1.23
CPNE3-209ENST00000620393 ANGPTL4Q9BY76 406 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 RNF32Q9H0A6 362 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 RNPEPL1Q9HAU8 725 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 NTN4Q9HB63 628 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 EXOSC3Q9NQT5 275 aaKnown RBP7.34□□□□□ -1.23
CPNE3-209ENST00000620393 SDHAF3Q9NRP4 125 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 DNAJB12Q9NXW2 375 aaKnown RBP7.34□□□□□ -1.23
CPNE3-209ENST00000620393 GPR83Q9NYM4 423 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 PLA2G3Q9NZ20 509 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 C6orf203Q9P0P8 240 aaPredicted RBP7.34□□□□□ -1.23
CPNE3-209ENST00000620393 LRFN1Q9P244 771 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 DNAJB9Q9UBS3 223 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 NKX1-2Q9UD57 310 aaPredicted RBP7.34□□□□□ -1.23
CPNE3-209ENST00000620393 CNOT11Q9UKZ1 510 aaKnown RBP7.34□□□□□ -1.23
CPNE3-209ENST00000620393 CARD8Q9Y2G2 431 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 RAXQ9Y2V3 346 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 PCSK5Q92824 1860 aa7.34□□□□□ -1.23
CPNE3-209ENST00000620393 A0A087WV48 116 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 IGLV3-32A0A0A0MS00 114 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 C1QTNF9BB2RNN3 333 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 J3QL48 77 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 AP3D1O14617 1153 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 OIP5O43482 229 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 SCO2O43819 266 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 FMO6PO60774 539 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 SEMA7AO75326 666 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 DEAF1O75398 565 aaPredicted RBP7.33□□□□□ -1.24
CPNE3-209ENST00000620393 PRSS23O95084 383 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 SNX4O95219 450 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 CST1P01037 141 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 MT-ND1P03886 318 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 C1QTNF9P0C862 333 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 UBTFL6P0CB48 400 aaPredicted RBP7.33□□□□□ -1.24
CPNE3-209ENST00000620393 CCL3P10147 92 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 UBL4AP11441 157 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 PRG2P13727 222 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 ITPKBP27987 946 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 MSX1P28360 303 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 CASRP41180 1078 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 YAP1P46937 504 aaKnown RBP7.33□□□□□ -1.24
CPNE3-209ENST00000620393 SMCPP49901 116 aaPredicted RBP7.33□□□□□ -1.24
CPNE3-209ENST00000620393 ZNF136P52737 540 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 HMGA2P52926 109 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 UCNP55089 124 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 RGS8P57771 180 aaPredicted RBP7.33□□□□□ -1.24
CPNE3-209ENST00000620393 HOXC5Q00444 222 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 OC90Q02509 493 aaPredicted RBP7.33□□□□□ -1.24
CPNE3-209ENST00000620393 SLC34A1Q06495 639 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 EPS8Q12929 822 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 PIN1Q13526 163 aaPredicted RBP7.33□□□□□ -1.24
CPNE3-209ENST00000620393 RAPSNQ13702 412 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 TUBA3CQ13748 450 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 ATP6AP1Q15904 470 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 FBXW10Q5XX13 1052 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 SPINK14Q6IE38 97 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 OR2T5Q6IEZ7 315 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 HMBOX1Q6NT76 420 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 TUBA3EQ6PEY2 450 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 CBLN3Q6UW01 205 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 IGFL2Q6UWQ7 119 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 UNQ6494/PRO21346Q6UXR6 183 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 MDGA2Q7Z553 956 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 AMIGO2Q86SJ2 522 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 CYP4Z1Q86W10 505 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 CYP4Z2PQ8N1L4 340 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 LSMEM1Q8N8F7 131 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms