RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 PDZK1Q5T2W1 519 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 TYW3Q6IPR3 259 aaKnown RBP13.65□□□□□ -0.22
CDH1-213ENST00000612417 SHFQ7M4L6 423 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 ASPGQ86U10 573 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 NRMQ8IXM6 262 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 PSD4Q8NDX1 1056 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 OR2B2Q9GZK3 357 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 HRASLS2Q9NWW9 162 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 TOR4AQ9NXH8 423 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 POLHQ9Y253 713 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 K7ESF4 209 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 TMCC2O75069 709 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 LALBAP00709 142 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 HLA-DQB1P01920 261 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 HMGN1P05114 100 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 THBS1P07996 1170 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 SMIM10L1P0DMW3 83 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 GPR4P46093 362 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 HOXC5Q00444 222 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 DMWDQ09019 674 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 DUSP8Q13202 625 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 NDUFA5Q16718 116 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 EIPR1Q53HC9 387 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 ZNF836Q6ZNA1 936 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 LHFPL3Q86UP9 236 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 RDH10Q8IZV5 341 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 KLHL36Q8N4N3 616 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 OR2T33Q8NG76 320 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 OR4F15Q8NGB8 312 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 TMEM255BQ8WV15 326 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 CDS1Q92903 461 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 CLIP3Q96DZ5 547 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 TM4SF19Q96DZ7 209 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 SMIM10Q96HG1 83 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 SNX18Q96RF0 628 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 SOSTQ9BQB4 213 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 IRF2BPLQ9H1B7 796 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 KRCC1Q9NPI7 259 aaPredicted RBP13.65□□□□□ -0.22
CDH1-213ENST00000612417 ASB6Q9NWX5 421 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 PTGFRNQ9P2B2 879 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 CLCA2Q9UQC9 943 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 NTNG1Q9Y2I2 539 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 WDR45Q9Y484 360 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 LAMA1P25391 3075 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 MEIOCA2RUB1 952 aa13.64□□□□□ -0.23
CDH1-213ENST00000612417 C2orf74A8MZ97 194 aa13.64□□□□□ -0.23
CDH1-213ENST00000612417 J3QRE1 110 aa13.64□□□□□ -0.23
CDH1-213ENST00000612417 HLA-DPB1P04440 258 aa13.64□□□□□ -0.23
CDH1-213ENST00000612417 SLC35G6P0C7Q6 338 aa13.64□□□□□ -0.23
CDH1-213ENST00000612417 NME1P15531 152 aaKnown RBP13.64□□□□□ -0.23
CDH1-213ENST00000612417 CFL1P23528 166 aaKnown RBP13.64□□□□□ -0.23
CDH1-213ENST00000612417 PTBP1P26599 531 aaKnown RBP eCLIP13.64□□□□□ -0.237e-8■■■□□ 17.6
CDH1-213ENST00000612417 SOX18P35713 384 aa13.64□□□□□ -0.23
CDH1-213ENST00000612417 ZNF136P52737 540 aa13.64□□□□□ -0.23
CDH1-213ENST00000612417 EEF1A1P68104 462 aaKnown RBP13.64□□□□□ -0.23
CDH1-213ENST00000612417 BDH1Q02338 343 aa13.64□□□□□ -0.23
CDH1-213ENST00000612417 SLC35F1Q5T1Q4 408 aa13.64□□□□□ -0.23
CDH1-213ENST00000612417 METAP1DQ6UB28 335 aaPredicted RBP13.64□□□□□ -0.23
CDH1-213ENST00000612417 GKN2Q86XP6 184 aa13.64□□□□□ -0.23
CDH1-213ENST00000612417 BRIX1Q8TDN6 353 aaKnown RBP13.64□□□□□ -0.23
CDH1-213ENST00000612417 ST6GAL2Q96JF0 529 aa13.64□□□□□ -0.23
CDH1-213ENST00000612417 FCRL4Q96PJ5 515 aa13.64□□□□□ -0.23
CDH1-213ENST00000612417 SERINC2Q96SA4 455 aa13.64□□□□□ -0.23
CDH1-213ENST00000612417 PHOX2BQ99453 314 aa13.64□□□□□ -0.23
CDH1-213ENST00000612417 RERGLQ9H628 205 aa13.64□□□□□ -0.23
CDH1-213ENST00000612417 CACYBPQ9HB71 228 aaKnown RBP13.64□□□□□ -0.23
CDH1-213ENST00000612417 CBLCQ9ULV8 474 aa13.64□□□□□ -0.23
CDH1-213ENST00000612417 RBMX2Q9Y388 322 aaKnown RBP13.64□□□□□ -0.23
CDH1-213ENST00000612417 HMX3A6NHT5 357 aa13.63□□□□□ -0.23
CDH1-213ENST00000612417 LRRTM2O43300 516 aa13.63□□□□□ -0.23
CDH1-213ENST00000612417 PIP5K1CO60331 668 aa13.63□□□□□ -0.23
CDH1-213ENST00000612417 CH25HO95992 272 aa13.63□□□□□ -0.23
CDH1-213ENST00000612417 TYRP1P17643 537 aa13.63□□□□□ -0.23
CDH1-213ENST00000612417 RPS4Y1P22090 263 aaKnown RBP13.63□□□□□ -0.23
CDH1-213ENST00000612417 CSNK1EP49674 416 aaKnown RBP13.63□□□□□ -0.23
CDH1-213ENST00000612417 SUZ12Q15022 739 aaKnown RBP13.63□□□□□ -0.23
CDH1-213ENST00000612417 SF3B4Q15427 424 aaKnown RBP eCLIP13.63□□□□□ -0.23
CDH1-213ENST00000612417 TAB1Q15750 504 aa13.63□□□□□ -0.23
CDH1-213ENST00000612417 EXOSC6Q5RKV6 272 aaKnown RBP13.63□□□□□ -0.23
CDH1-213ENST00000612417 ZNF362Q5T0B9 420 aaPredicted RBP13.63□□□□□ -0.23
CDH1-213ENST00000612417 ARMC6Q6NXE6 501 aa13.63□□□□□ -0.23
CDH1-213ENST00000612417 FIGLAQ6QHK4 219 aa13.63□□□□□ -0.23
CDH1-213ENST00000612417 TSSK4Q6SA08 328 aa13.63□□□□□ -0.23
CDH1-213ENST00000612417 VWA5B2Q8N398 1253 aa13.63□□□□□ -0.23
CDH1-213ENST00000612417 OR4K14Q8NGD5 310 aa13.63□□□□□ -0.23
CDH1-213ENST00000612417 FLVCR1-AS1Q8TAF5 88 aa13.63□□□□□ -0.23
CDH1-213ENST00000612417 DNAJA4Q8WW22 397 aaPredicted RBP13.63□□□□□ -0.23
CDH1-213ENST00000612417 TP53INP1Q96A56 240 aa13.63□□□□□ -0.23
CDH1-213ENST00000612417 C11orf54Q9H0W9 315 aaPredicted RBP13.63□□□□□ -0.23
CDH1-213ENST00000612417 FBXO9Q9UK97 447 aaPredicted RBP13.63□□□□□ -0.23
CDH1-213ENST00000612417 PRELID1Q9Y255 219 aa13.63□□□□□ -0.23
CDH1-213ENST00000612417 CDC42EP2O14613 210 aa13.63□□□□□ -0.23
CDH1-213ENST00000612417 CASKO14936 926 aa13.63□□□□□ -0.23
CDH1-213ENST00000612417 TNFSF14O43557 240 aa13.63□□□□□ -0.23
CDH1-213ENST00000612417 HCN1O60741 890 aa13.63□□□□□ -0.23
CDH1-213ENST00000612417 CPN2P22792 545 aa13.63□□□□□ -0.23
CDH1-213ENST00000612417 PPM1FP49593 454 aaPredicted RBP13.63□□□□□ -0.23
CDH1-213ENST00000612417 MAZP56270 477 aaKnown RBP13.63□□□□□ -0.23
CDH1-213ENST00000612417 RIN1Q13671 783 aa13.63□□□□□ -0.23
CDH1-213ENST00000612417 DUSP5Q16690 384 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms