RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 MYO3BQ8WXR4 1341 aa4.17□□□□□ -1.74
LINC00397-202ENST00000606785 ROCK1Q13464 1354 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 TRAV6A0A075B6T7 132 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 IQANK1A0A1B0GTG1 560 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 TEX48A0A1B0GUV7 120 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 FAM240BA0A1B0GVZ2 78 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 CTAGE15A4D2H0 777 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.16□□□□□ -1.74
LINC00397-202ENST00000606785 PRSS44E7EML9 344 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 NPIPA7E9PJI5 369 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 OR7A17O14581 309 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 NVLO15381 856 aaKnown RBP4.16□□□□□ -1.74
LINC00397-202ENST00000606785 SULT1B1O43704 296 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 IDH3BO43837 385 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 ECI2O75521 394 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 SCGNO76038 276 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 HCKP08631 526 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 HBQ1P09105 142 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 SNRPCP09234 159 aaKnown RBP4.16□□□□□ -1.74
LINC00397-202ENST00000606785 WNT2P09544 360 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 NPIPA8P0DM63 369 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 IDO1P14902 403 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 PCMT1P22061 227 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 UGT1A4P22310 534 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 PRKAR2BP31323 418 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 RPL4P36578 427 aaKnown RBP4.16□□□□□ -1.74
LINC00397-202ENST00000606785 HPCAL1P37235 193 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 BDKRB1P46663 353 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 FNTAP49354 379 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 NOVA1P51513 510 aaKnown RBP4.16□□□□□ -1.74
LINC00397-202ENST00000606785 AP3M2P53677 418 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 KRTAP10-6P60371 365 aaPredicted RBP4.16□□□□□ -1.74
LINC00397-202ENST00000606785 RPL23AP62750 156 aaKnown RBP4.16□□□□□ -1.74
LINC00397-202ENST00000606785 WDR43Q15061 677 aaKnown RBP eCLIP4.16□□□□□ -1.74
LINC00397-202ENST00000606785 SIX1Q15475 284 aaPredicted RBP4.16□□□□□ -1.74
LINC00397-202ENST00000606785 TMEM52BQ4KMG9 183 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 DCST2Q5T1A1 773 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 ACSM5Q6NUN0 579 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 KCNIP4Q6PIL6 250 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 STAC2Q6ZMT1 411 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 GCNT7Q6ZNI0 430 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 NLRP9Q7RTR0 991 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 CTAGE6Q86UF2 777 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 ITPRIPQ8IWB1 547 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 OR4D5Q8NGN0 318 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 CNIH3Q8TBE1 160 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 GTF3AQ92664 365 aaKnown RBP4.16□□□□□ -1.74
LINC00397-202ENST00000606785 PELI1Q96FA3 418 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 ATP6V1G3Q96LB4 118 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 C12orf66Q96MD2 445 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 NPY6RQ99463 290 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 CCDC77Q9BR77 488 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 DUSP16Q9BY84 665 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 PSTPIP2Q9H939 334 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 ZDHHC18Q9NUE0 388 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 EMC3Q9P0I2 261 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 CDH9Q9ULB4 789 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 NPIPA1Q9UND3 350 aa4.16□□□□□ -1.74
LINC00397-202ENST00000606785 HELTA6NFD8 242 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 FAM47DPA6NHR8 397 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 OR6C65A6NJZ3 312 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 L7N2F9 121 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 SPOPO43791 374 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 FCMRO60667 390 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 TRIM3O75382 744 aaPredicted RBP4.15□□□□□ -1.75
LINC00397-202ENST00000606785 POP4O95707 220 aaKnown RBP4.15□□□□□ -1.75
LINC00397-202ENST00000606785 SERPINA3P01011 423 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 IGHV3-9P01782 118 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 TROVE2P10155 538 aaKnown RBP eCLIP4.15□□□□□ -1.75
LINC00397-202ENST00000606785 NCF2P19878 526 aaPredicted RBP4.15□□□□□ -1.75
LINC00397-202ENST00000606785 ZNF10P21506 573 aaPredicted RBP4.15□□□□□ -1.75
LINC00397-202ENST00000606785 ATP5A1P25705 553 aaKnown RBP4.15□□□□□ -1.75
LINC00397-202ENST00000606785 MAGEA9P43362 315 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 RANBP1P43487 201 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 ATP4BP51164 291 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 DSTNP60981 165 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 CUL2Q13617 745 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 IDI1Q13907 227 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 LY6DQ14210 128 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 MXD4Q14582 209 aaPredicted RBP4.15□□□□□ -1.75
LINC00397-202ENST00000606785 PCK2Q16822 640 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 SNAI3Q3KNW1 292 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 MS4A13Q5J8X5 152 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 REP15Q6BDI9 236 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 PRSS48Q7RTY5 328 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 CATSPER3Q86XQ3 398 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 BPIFB2Q8N4F0 458 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 ARL14Q8N4G2 192 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 RNF10Q8N5U6 811 aaKnown RBP4.15□□□□□ -1.75
LINC00397-202ENST00000606785 Q8NBF4 154 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 ZNF248Q8NDW4 579 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 PRSS33Q8NF86 280 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 OR1F12Q8NHA8 337 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 AKR7LQ8NHP1 331 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 FLVCR1-AS1Q8TAF5 88 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 CRYGNQ8WXF5 182 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 SGK3Q96BR1 496 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 SLC6A7Q99884 636 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 ATF6BQ99941 703 aa4.15□□□□□ -1.75
LINC00397-202ENST00000606785 RIOK1Q9BRS2 568 aaKnown RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms