RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 GP2P55259 537 aaKnown RBP12.19□□□□□ -0.46
VRK3-205ENST00000593919 TARDBPQ13148 414 aaKnown RBP eCLIP12.19□□□□□ -0.46
VRK3-205ENST00000593919 LARS2Q15031 903 aaKnown RBP12.19□□□□□ -0.46
VRK3-205ENST00000593919 MICAQ29983 383 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 TMEM164Q5U3C3 297 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 DHRS4L2Q6PKH6 230 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 DEF8Q6ZN54 512 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 CCDC81Q6ZN84 652 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 ZNF836Q6ZNA1 936 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 ENTHD1Q8IYW4 607 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 NFAM1Q8NET5 270 aaPredicted RBP12.19□□□□□ -0.46
VRK3-205ENST00000593919 B3GNT7Q8NFL0 401 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 OR2Y1Q8NGV0 311 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 LCORQ96JN0 433 aaPredicted RBP12.19□□□□□ -0.46
VRK3-205ENST00000593919 LPAR4Q99677 370 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 NIPSNAP1Q9BPW8 284 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 NRSN2Q9GZP1 204 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 WWTR1Q9GZV5 400 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 TRIM45Q9H8W5 580 aaPredicted RBP12.19□□□□□ -0.46
VRK3-205ENST00000593919 CACYBPQ9HB71 228 aaKnown RBP12.19□□□□□ -0.46
VRK3-205ENST00000593919 C19orf25Q9UFG5 118 aaPredicted RBP12.19□□□□□ -0.46
VRK3-205ENST00000593919 ZNF223Q9UK11 482 aaPredicted RBP12.19□□□□□ -0.46
VRK3-205ENST00000593919 PCDHGA6Q9Y5G7 932 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 DCHS1Q96JQ0 3298 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 FRG2CA6NGY1 282 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 OR6C76A6NM76 312 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 PCDH17O14917 1159 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 FRS3O43559 492 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 MT-ND2P03891 347 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 THBS1P07996 1170 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 CCNYL3P0C7X3 344 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 ANXA8P13928 327 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 POU2F1P14859 743 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 RHCEP18577 417 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 CSRP1P21291 193 aaKnown RBP12.19□□□□□ -0.46
VRK3-205ENST00000593919 NR4A1P22736 598 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 SLC35A2P78381 396 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 EMX1Q04741 257 aaPredicted RBP12.19□□□□□ -0.46
VRK3-205ENST00000593919 NFATC3Q12968 1075 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 TCTN3Q6NUS6 607 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 SLC29A4Q7RTT9 530 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 ZNF605Q86T29 641 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 CLIP4Q8N3C7 705 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 OR6T1Q8NGN1 323 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 FAM81AQ8TBF8 368 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 FAR1Q8WVX9 515 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 HRASLS5Q96KN8 279 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 G6PC3Q9BUM1 346 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 FUNDC2Q9BWH2 189 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 SEMA4CQ9C0C4 833 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 PPIEQ9UNP9 301 aaKnown RBP12.19□□□□□ -0.46
VRK3-205ENST00000593919 RNF6Q9Y252 685 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 POFUT2Q9Y2G5 429 aa12.19□□□□□ -0.46
VRK3-205ENST00000593919 CDC14CA4D256 554 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 ZNF99A8MXY4 864 aaPredicted RBP12.18□□□□□ -0.46
VRK3-205ENST00000593919 E9PQ18 207 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 FFAR1O14842 300 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 TM4SF5O14894 197 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 WBP4O75554 376 aaKnown RBP12.18□□□□□ -0.46
VRK3-205ENST00000593919 FADS2O95864 444 aaKnown RBP12.18□□□□□ -0.46
VRK3-205ENST00000593919 DBIP07108 87 aaKnown RBP12.18□□□□□ -0.46
VRK3-205ENST00000593919 GUSBP08236 651 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 NID1P14543 1247 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 DRD5P21918 477 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 RNF144AP50876 292 aaPredicted RBP12.18□□□□□ -0.46
VRK3-205ENST00000593919 CXCR4P61073 352 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 DCAF7P61962 342 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 EEF1A1P68104 462 aaKnown RBP12.18□□□□□ -0.46
VRK3-205ENST00000593919 DECR1Q16698 335 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 PDZK1Q5T2W1 519 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 HLA-DQA1Q5Y7H0 255 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 MARCH9Q86YJ5 346 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 PHF10Q8WUB8 498 aaKnown RBP12.18□□□□□ -0.46
VRK3-205ENST00000593919 RAB2BQ8WUD1 216 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 CT55Q8WUE5 264 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 APH1BQ8WW43 257 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 GTPBP3Q969Y2 492 aaKnown RBP12.18□□□□□ -0.46
VRK3-205ENST00000593919 EFHD2Q96C19 240 aaPredicted RBP12.18□□□□□ -0.46
VRK3-205ENST00000593919 ZNF556Q9HAH1 456 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 ACER3Q9NUN7 267 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 SLC13A4Q9UKG4 626 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 ZNF232Q9UNY5 417 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 PCDHGA10Q9Y5H3 936 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 LOC102723996A0A087X1L8 192 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 RGS10O43665 173 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 CCNB2O95067 398 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 TNFSF15O95150 251 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 ZNF182P17025 639 aaPredicted RBP12.18□□□□□ -0.46
VRK3-205ENST00000593919 TCN2P20062 427 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 GGT2P36268 569 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 FOLR3P41439 243 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 NR0B1P51843 470 aaKnown RBP12.18□□□□□ -0.46
VRK3-205ENST00000593919 RNF4P78317 190 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 DCTN2Q13561 401 aaKnown RBP12.18□□□□□ -0.46
VRK3-205ENST00000593919 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.18□□□□□ -0.46
VRK3-205ENST00000593919 EIPR1Q53HC9 387 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 MRPL2Q5T653 305 aaKnown RBP12.18□□□□□ -0.46
VRK3-205ENST00000593919 ZBTB46Q86UZ6 589 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 TAGAPQ8N103 731 aa12.18□□□□□ -0.46
VRK3-205ENST00000593919 ZNF614Q8N883 585 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms