RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 ING1Q9UK53 422 aaPredicted RBP13.34□□□□□ -0.27
SF3A2-204ENST00000589118 ZNF500O60304 480 aaPredicted RBP13.33□□□□□ -0.28
SF3A2-204ENST00000589118 DDCP20711 480 aa13.33□□□□□ -0.28
SF3A2-204ENST00000589118 TTKP33981 857 aa13.33□□□□□ -0.28
SF3A2-204ENST00000589118 ZNF41P51814 821 aaPredicted RBP13.33□□□□□ -0.28
SF3A2-204ENST00000589118 PRKAG1P54619 331 aa13.33□□□□□ -0.28
SF3A2-204ENST00000589118 RAB35Q15286 201 aa13.33□□□□□ -0.28
SF3A2-204ENST00000589118 ZNHIT3Q15649 155 aaPredicted RBP13.33□□□□□ -0.28
SF3A2-204ENST00000589118 TOMM34Q15785 309 aaPredicted RBP13.33□□□□□ -0.28
SF3A2-204ENST00000589118 NRF1Q16656 503 aa13.33□□□□□ -0.28
SF3A2-204ENST00000589118 TMEM176BQ3YBM2 270 aaPredicted RBP13.33□□□□□ -0.28
SF3A2-204ENST00000589118 CCNJQ5T5M9 372 aa13.33□□□□□ -0.28
SF3A2-204ENST00000589118 AGAP6Q5VW22 663 aa13.33□□□□□ -0.28
SF3A2-204ENST00000589118 GTF2IRD2BQ6EKJ0 949 aa13.33□□□□□ -0.28
SF3A2-204ENST00000589118 ANKRD26P1Q6NSI1 321 aa13.33□□□□□ -0.28
SF3A2-204ENST00000589118 FCRLAQ7L513 359 aa13.33□□□□□ -0.28
SF3A2-204ENST00000589118 GTF2IRD2Q86UP8 949 aa13.33□□□□□ -0.28
SF3A2-204ENST00000589118 SAMD14Q8IZD0 417 aaPredicted RBP13.33□□□□□ -0.28
SF3A2-204ENST00000589118 EIF1ADQ8N9N8 165 aaKnown RBP13.33□□□□□ -0.28
SF3A2-204ENST00000589118 METTL6Q8TCB7 284 aa13.33□□□□□ -0.28
SF3A2-204ENST00000589118 C10orf105Q8TEF2 133 aa13.33□□□□□ -0.28
SF3A2-204ENST00000589118 IFT81Q8WYA0 676 aa13.33□□□□□ -0.28
SF3A2-204ENST00000589118 FAM168AQ92567 244 aa13.33□□□□□ -0.28
SF3A2-204ENST00000589118 C3orf49Q96BT1 292 aa13.33□□□□□ -0.28
SF3A2-204ENST00000589118 ZNF300Q96RE9 604 aaPredicted RBP13.33□□□□□ -0.28
SF3A2-204ENST00000589118 C1QTNF6Q9BXI9 259 aa13.33□□□□□ -0.28
SF3A2-204ENST00000589118 POTEKPQ9BYX7 375 aa13.33□□□□□ -0.28
SF3A2-204ENST00000589118 TMEM160Q9NX00 188 aa13.33□□□□□ -0.28
SF3A2-204ENST00000589118 POLR3HQ9Y535 204 aaPredicted RBP13.33□□□□□ -0.28
SF3A2-204ENST00000589118 HEATR1Q9H583 2144 aaKnown RBP13.33□□□□□ -0.28
SF3A2-204ENST00000589118 A0A087WZY1 265 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 NPIPA5A0A0B4J1W7 369 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 A0A1W2PNR3 127 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 ALG1L2C9J202 215 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 NPIPA7E9PJI5 369 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 ULK1O75385 1050 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 PRKD3O94806 890 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 SUPT7LO94864 414 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 KCNH1O95259 989 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 IGHV3-9P01782 118 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 KRT6AP02538 564 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 KRT6BP04259 564 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 FESP07332 822 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 YES1P07947 543 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 LINGO3P0C6S8 592 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 NPIPA8P0DM63 369 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 ACP2P11117 423 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 IGHV1-2P23083 117 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 ME2P23368 584 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 HMOX2P30519 316 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 KRT6CP48668 564 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 ZNF83P51522 516 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 LSM11P83369 360 aaKnown RBP eCLIP13.32□□□□□ -0.28
SF3A2-204ENST00000589118 HSPB3Q12988 150 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 SPDYAQ5MJ70 313 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 PDSS1Q5T2R2 415 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 FAM71E1Q6IPT2 247 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 Q6ZSR9 355 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 TRABD2AQ86V40 505 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 IFT20Q8IY31 132 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 FBXO27Q8NI29 283 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 ZBTB8AQ96BR9 441 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 C16orf58Q96GQ5 468 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 REXO5Q96IC2 774 aaKnown RBP13.32□□□□□ -0.28
SF3A2-204ENST00000589118 EGLN2Q96KS0 407 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 GRIP2Q9C0E4 1043 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 COQ10BQ9H8M1 238 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 EML4Q9HC35 981 aaKnown RBP13.32□□□□□ -0.28
SF3A2-204ENST00000589118 CBLN4Q9NTU7 201 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 LPAR3Q9UBY5 353 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 ZNF180Q9UJW8 692 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 MRTO4Q9UKD2 239 aaKnown RBP13.32□□□□□ -0.28
SF3A2-204ENST00000589118 SNX8Q9Y5X2 465 aa13.32□□□□□ -0.28
SF3A2-204ENST00000589118 LOC100289279A0A1B0GTE1 492 aa13.31□□□□□ -0.28
SF3A2-204ENST00000589118 ABHD2P08910 425 aa13.31□□□□□ -0.28
SF3A2-204ENST00000589118 MAGEA12P43365 314 aa13.31□□□□□ -0.28
SF3A2-204ENST00000589118 PSMD4P55036 377 aaKnown RBP13.31□□□□□ -0.28
SF3A2-204ENST00000589118 FOXA1P55317 472 aa13.31□□□□□ -0.28
SF3A2-204ENST00000589118 CHRNEQ04844 493 aa13.31□□□□□ -0.28
SF3A2-204ENST00000589118 GGTLC2Q14390 218 aa13.31□□□□□ -0.28
SF3A2-204ENST00000589118 SLC29A2Q14542 456 aa13.31□□□□□ -0.28
SF3A2-204ENST00000589118 NDUFAF6Q330K2 333 aa13.31□□□□□ -0.28
SF3A2-204ENST00000589118 SPIN4Q56A73 249 aa13.31□□□□□ -0.28
SF3A2-204ENST00000589118 SLC22A25Q6T423 547 aa13.31□□□□□ -0.28
SF3A2-204ENST00000589118 CBLN3Q6UW01 205 aa13.31□□□□□ -0.28
SF3A2-204ENST00000589118 GPRIN3Q6ZVF9 776 aa13.31□□□□□ -0.28
SF3A2-204ENST00000589118 OR52N5Q8NH56 324 aa13.31□□□□□ -0.28
SF3A2-204ENST00000589118 B4GALNT2Q8NHY0 566 aa13.31□□□□□ -0.28
SF3A2-204ENST00000589118 CIDECQ96AQ7 238 aaPredicted RBP13.31□□□□□ -0.28
SF3A2-204ENST00000589118 MSI2Q96DH6 328 aaKnown RBP13.31□□□□□ -0.28
SF3A2-204ENST00000589118 TMEM237Q96Q45 408 aa13.31□□□□□ -0.28
SF3A2-204ENST00000589118 C1QTNF3Q9BXJ4 246 aa13.31□□□□□ -0.28
SF3A2-204ENST00000589118 PLA2G12AQ9BZM1 189 aa13.31□□□□□ -0.28
SF3A2-204ENST00000589118 MIEF1Q9NQG6 463 aa13.31□□□□□ -0.28
SF3A2-204ENST00000589118 FAIMQ9NVQ4 179 aa13.31□□□□□ -0.28
SF3A2-204ENST00000589118 TMCO1Q9UM00 188 aa13.31□□□□□ -0.28
SF3A2-204ENST00000589118 NFU1Q9UMS0 254 aa13.31□□□□□ -0.28
SF3A2-204ENST00000589118 DYSFO75923 2080 aa13.3□□□□□ -0.28
SF3A2-204ENST00000589118 C7orf72A4D263 438 aa13.3□□□□□ -0.28
SF3A2-204ENST00000589118 ZNF195O14628 629 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms