RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 LSM2Q9Y333 95 aaKnown RBP3.87□□□□□ -1.79
LIG3-211ENST00000588713 PLEKHM1Q9Y4G2 1056 aa3.87□□□□□ -1.79
LIG3-211ENST00000588713 OARD1Q9Y530 152 aa3.87□□□□□ -1.79
LIG3-211ENST00000588713 SNX10Q9Y5X0 201 aa3.87□□□□□ -1.79
LIG3-211ENST00000588713 ALG5Q9Y673 324 aa3.87□□□□□ -1.79
LIG3-211ENST00000588713 CFAP20Q9Y6A4 193 aaKnown RBP3.87□□□□□ -1.79
LIG3-211ENST00000588713 AKAP6Q13023 2319 aa3.87□□□□□ -1.79
LIG3-211ENST00000588713 IGLV3-10A0A075B6K4 115 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 IGHV1OR21-1A0A087WYE8 117 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 RPS10-NUDT3A0A1W2PQS6 291 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 IRGMA1A4Y4 181 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 C7orf66A4D0T2 115 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 NKX2-6A6NCS4 301 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 ZAR1LA6NP61 321 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 TRIM77I1YAP6 450 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 J3KR12 359 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 MANBAO00462 879 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 BTN3A3O00478 584 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 CCL22O00626 93 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 RFXANKO14593 260 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 RGS5O15539 181 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 SLC19A2O60779 497 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 CTAG2O75638 210 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 GPX5O75715 221 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 SLC22A5O76082 557 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 PRAMEF1O95521 474 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 WDPCPO95876 746 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 CTSLP07711 333 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 EBLN1P0CF75 366 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 BCKDHAP12694 445 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 SLC2A4P14672 509 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 ARSBP15848 533 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 CTPS1P17812 591 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 IGFBP2P18065 325 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 GPX2P18283 190 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 CBLP22681 906 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 RPS3P23396 243 aaKnown RBP eCLIP3.86□□□□□ -1.79
LIG3-211ENST00000588713 PSMA1P25786 263 aaKnown RBP3.86□□□□□ -1.79
LIG3-211ENST00000588713 C21orf33P30042 268 aaPredicted RBP3.86□□□□□ -1.79
LIG3-211ENST00000588713 KDELR2P33947 212 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 SDC2P34741 201 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 KIR2DL3P43628 341 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 MAPK9P45984 424 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 MAPKAPK2P49137 400 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 RGS4P49798 205 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 GBX2P52951 348 aaPredicted RBP3.86□□□□□ -1.79
LIG3-211ENST00000588713 MAPK12P53778 367 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 SNRPGP62308 76 aaKnown RBP3.86□□□□□ -1.79
LIG3-211ENST00000588713 ST3GAL4Q11206 333 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 PPP1R8Q12972 351 aaKnown RBP3.86□□□□□ -1.79
LIG3-211ENST00000588713 MFSD13AQ14CX5 517 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 ABRAXAS2Q15018 415 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 MED22Q15528 200 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 BAK1Q16611 211 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 CHRFAM7AQ494W8 412 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 IQCCQ4KMZ1 466 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 RFTN2Q52LD8 501 aaPredicted RBP3.86□□□□□ -1.79
LIG3-211ENST00000588713 ZMAT1Q5H9K5 638 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 CDKL4Q5MAI5 379 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 CTSL3PQ5NE16 218 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 LCE3BQ5TA77 95 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 HACD4Q5VWC8 232 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 BICRALQ6AI39 1079 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 PLAG1Q6DJT9 500 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 FCRL6Q6DN72 434 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 LAMTOR1Q6IAA8 161 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 TMEM65Q6PI78 240 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 OGFOD3Q6PK18 319 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 SCIMPQ6UWF3 145 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 SUSD1Q6UWL2 747 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 SBSNQ6UWP8 590 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 IGFL3Q6UXB1 125 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 C12orf54Q6X4T0 127 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 MED25Q71SY5 747 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 ERN2Q76MJ5 926 aaKnown RBP3.86□□□□□ -1.79
LIG3-211ENST00000588713 LRRC70Q7Z2Q7 622 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 GLT6D1Q7Z4J2 308 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 GALNT10Q86SR1 603 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 ASPGQ86U10 573 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 CDC20BQ86Y33 519 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 ADGRG3Q86Y34 549 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 PTOV1Q86YD1 416 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 SLC30A8Q8IWU4 369 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 FAM217AQ8IXS0 508 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 LAS2Q8IYD9 372 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 ZNF683Q8IZ20 524 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 APCDD1Q8J025 514 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 B3GNT7Q8NFL0 401 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 OR13C4Q8NGS5 318 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 CCL4L1Q8NHW4 92 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 ADAMTS18Q8TE60 1221 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 UBASH3BQ8TF42 649 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 EDEM1Q92611 657 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 HGDQ93099 445 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 HMCESQ96FZ2 354 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 CMTM7Q96FZ5 175 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 PDXPQ96GD0 296 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 CDKN2AIPNLQ96HQ2 116 aa3.86□□□□□ -1.79
LIG3-211ENST00000588713 METTL2AQ96IZ6 378 aaKnown RBP3.86□□□□□ -1.79
LIG3-211ENST00000588713 EXOC2Q96KP1 924 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 175.3 ms