RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 LRTOMTQ8WZ04 291 aa14.76□□□□□ -0.05
SS18-226ENST00000585241 NR4A3Q92570 626 aa14.76□□□□□ -0.05
SS18-226ENST00000585241 DHRS1Q96LJ7 313 aa14.76□□□□□ -0.05
SS18-226ENST00000585241 ZNF347Q96SE7 839 aa14.76□□□□□ -0.05
SS18-226ENST00000585241 PKP2Q99959 881 aa14.76□□□□□ -0.05
SS18-226ENST00000585241 OSBPL11Q9BXB4 747 aa14.76□□□□□ -0.05
SS18-226ENST00000585241 ANGPTL4Q9BY76 406 aa14.76□□□□□ -0.05
SS18-226ENST00000585241 DNAJB9Q9UBS3 223 aa14.76□□□□□ -0.05
SS18-226ENST00000585241 NKX1-2Q9UD57 310 aaPredicted RBP14.76□□□□□ -0.05
SS18-226ENST00000585241 WIF1Q9Y5W5 379 aa14.76□□□□□ -0.05
SS18-226ENST00000585241 IGF2RP11717 2491 aa14.75□□□□□ -0.05
SS18-226ENST00000585241 C1QTNF9BB2RNN3 333 aa14.75□□□□□ -0.05
SS18-226ENST00000585241 FAAHO00519 579 aa14.75□□□□□ -0.05
SS18-226ENST00000585241 CLOCKO15516 846 aa14.75□□□□□ -0.05
SS18-226ENST00000585241 OIP5O43482 229 aa14.75□□□□□ -0.05
SS18-226ENST00000585241 SCO2O43819 266 aa14.75□□□□□ -0.05
SS18-226ENST00000585241 ADAM11O75078 769 aa14.75□□□□□ -0.05
SS18-226ENST00000585241 LDLRP01130 860 aa14.75□□□□□ -0.05
SS18-226ENST00000585241 C1QTNF9P0C862 333 aa14.75□□□□□ -0.05
SS18-226ENST00000585241 UBTFL6P0CB48 400 aaPredicted RBP14.75□□□□□ -0.05
SS18-226ENST00000585241 CCL3P10147 92 aa14.75□□□□□ -0.05
SS18-226ENST00000585241 CASRP41180 1078 aa14.75□□□□□ -0.05
SS18-226ENST00000585241 RNF144AP50876 292 aaPredicted RBP14.75□□□□□ -0.05
SS18-226ENST00000585241 SUMO3P55854 103 aaPredicted RBP14.75□□□□□ -0.05
SS18-226ENST00000585241 C17orf67Q0P5P2 114 aa14.75□□□□□ -0.05
SS18-226ENST00000585241 EPS8Q12929 822 aa14.75□□□□□ -0.05
SS18-226ENST00000585241 TUBA3CQ13748 450 aa14.75□□□□□ -0.05
SS18-226ENST00000585241 SLC22A10Q63ZE4 541 aa14.75□□□□□ -0.05
SS18-226ENST00000585241 OR2T5Q6IEZ7 315 aa14.75□□□□□ -0.05
SS18-226ENST00000585241 TUBA3EQ6PEY2 450 aa14.75□□□□□ -0.05
SS18-226ENST00000585241 LRRC69Q6ZNQ3 347 aa14.75□□□□□ -0.05
SS18-226ENST00000585241 GATSQ8NAP1 163 aa14.75□□□□□ -0.05
SS18-226ENST00000585241 FDCSPQ8NFU4 85 aa14.75□□□□□ -0.05
SS18-226ENST00000585241 OR2T29Q8NH02 315 aa14.75□□□□□ -0.05
SS18-226ENST00000585241 ARSGQ96EG1 525 aa14.75□□□□□ -0.05
SS18-226ENST00000585241 PRRC1Q96M27 445 aa14.75□□□□□ -0.05
SS18-226ENST00000585241 PIP5K1AQ99755 562 aa14.75□□□□□ -0.05
SS18-226ENST00000585241 UTP23Q9BRU9 249 aaKnown RBP14.75□□□□□ -0.05
SS18-226ENST00000585241 RASSF4Q9H2L5 321 aa14.75□□□□□ -0.05
SS18-226ENST00000585241 METTL7AQ9H8H3 244 aa14.75□□□□□ -0.05
SS18-226ENST00000585241 NTN4Q9HB63 628 aa14.75□□□□□ -0.05
SS18-226ENST00000585241 PROK2Q9HC23 129 aa14.75□□□□□ -0.05
SS18-226ENST00000585241 ICAM5Q9UMF0 924 aa14.75□□□□□ -0.05
SS18-226ENST00000585241 A4GNTQ9UNA3 340 aa14.75□□□□□ -0.05
SS18-226ENST00000585241 RAXQ9Y2V3 346 aa14.75□□□□□ -0.05
SS18-226ENST00000585241 TMEM8BA6NDV4 472 aa14.74□□□□□ -0.05
SS18-226ENST00000585241 TAF4O00268 1085 aa14.74□□□□□ -0.05
SS18-226ENST00000585241 AP3D1O14617 1153 aa14.74□□□□□ -0.05
SS18-226ENST00000585241 FFAR1O14842 300 aa14.74□□□□□ -0.05
SS18-226ENST00000585241 CASQ2O14958 399 aaPredicted RBP14.74□□□□□ -0.05
SS18-226ENST00000585241 NEURL1O76050 574 aa14.74□□□□□ -0.05
SS18-226ENST00000585241 WDPCPO95876 746 aa14.74□□□□□ -0.05
SS18-226ENST00000585241 CST1P01037 141 aa14.74□□□□□ -0.05
SS18-226ENST00000585241 GKN3PP0CG01 181 aa14.74□□□□□ -0.05
SS18-226ENST00000585241 PRG2P13727 222 aa14.74□□□□□ -0.05
SS18-226ENST00000585241 HTR2AP28223 471 aa14.74□□□□□ -0.05
SS18-226ENST00000585241 CD96P40200 585 aa14.74□□□□□ -0.05
SS18-226ENST00000585241 CCL11P51671 97 aa14.74□□□□□ -0.05
SS18-226ENST00000585241 ZNF117Q03924 483 aa14.74□□□□□ -0.05
SS18-226ENST00000585241 SLC34A1Q06495 639 aa14.74□□□□□ -0.05
SS18-226ENST00000585241 GK3PQ14409 553 aa14.74□□□□□ -0.05
SS18-226ENST00000585241 NDUFAF6Q330K2 333 aa14.74□□□□□ -0.05
SS18-226ENST00000585241 FBXW10Q5XX13 1052 aa14.74□□□□□ -0.05
SS18-226ENST00000585241 BICRALQ6AI39 1079 aa14.74□□□□□ -0.05
SS18-226ENST00000585241 CBLN3Q6UW01 205 aa14.74□□□□□ -0.05
SS18-226ENST00000585241 DEF8Q6ZN54 512 aa14.74□□□□□ -0.05
SS18-226ENST00000585241 RANBP3LQ86VV4 465 aaPredicted RBP14.74□□□□□ -0.05
SS18-226ENST00000585241 TSPYL5Q86VY4 417 aaPredicted RBP14.74□□□□□ -0.05
SS18-226ENST00000585241 CYP4Z1Q86W10 505 aa14.74□□□□□ -0.05
SS18-226ENST00000585241 OFCC1Q8IZS5 231 aa14.74□□□□□ -0.05
SS18-226ENST00000585241 LSMEM1Q8N8F7 131 aa14.74□□□□□ -0.05
SS18-226ENST00000585241 PIK3C3Q8NEB9 887 aa14.74□□□□□ -0.05
SS18-226ENST00000585241 HAS2Q92819 552 aa14.74□□□□□ -0.05
SS18-226ENST00000585241 CENPNQ96H22 339 aaPredicted RBP14.74□□□□□ -0.05
SS18-226ENST00000585241 DCBLD2Q96PD2 775 aa14.74□□□□□ -0.05
SS18-226ENST00000585241 MCHR1Q99705 422 aa14.74□□□□□ -0.05
SS18-226ENST00000585241 SMAD5Q99717 465 aaKnown RBP14.74□□□□□ -0.05
SS18-226ENST00000585241 ZNF559Q9BR84 538 aa14.74□□□□□ -0.05
SS18-226ENST00000585241 SDHAF3Q9NRP4 125 aa14.74□□□□□ -0.05
SS18-226ENST00000585241 KLRF1Q9NZS2 232 aa14.74□□□□□ -0.05
SS18-226ENST00000585241 LRFN1Q9P244 771 aa14.74□□□□□ -0.05
SS18-226ENST00000585241 CARD8Q9Y2G2 431 aa14.74□□□□□ -0.05
SS18-226ENST00000585241 FAM32AQ9Y421 112 aaKnown RBP14.74□□□□□ -0.05
SS18-226ENST00000585241 CNTRLQ7Z7A1 2325 aa14.74□□□□□ -0.05
SS18-226ENST00000585241 PTPRQQ9UMZ3 2332 aa14.74□□□□□ -0.05
SS18-226ENST00000585241 ASPMQ8IZT6 3477 aa14.74□□□□□ -0.05
SS18-226ENST00000585241 HEATR5AQ86XA9 2040 aa14.73□□□□□ -0.05
SS18-226ENST00000585241 OR5H15A6NDH6 313 aa14.73□□□□□ -0.05
SS18-226ENST00000585241 A6NL46 340 aa14.73□□□□□ -0.05
SS18-226ENST00000585241 B4DXG7 233 aa14.73□□□□□ -0.05
SS18-226ENST00000585241 J3KTA2 159 aa14.73□□□□□ -0.05
SS18-226ENST00000585241 GTPBP1O00178 669 aaKnown RBP14.73□□□□□ -0.05
SS18-226ENST00000585241 ADAMDEC1O15204 470 aa14.73□□□□□ -0.05
SS18-226ENST00000585241 DIRAS1O95057 198 aa14.73□□□□□ -0.05
SS18-226ENST00000585241 OR5F1O95221 314 aa14.73□□□□□ -0.05
SS18-226ENST00000585241 BAG2O95816 211 aa14.73□□□□□ -0.05
SS18-226ENST00000585241 MSX1P28360 303 aa14.73□□□□□ -0.05
SS18-226ENST00000585241 SLC6A8P48029 635 aa14.73□□□□□ -0.05
SS18-226ENST00000585241 ST13P50502 369 aaKnown RBP14.73□□□□□ -0.05
SS18-226ENST00000585241 P2RX1P51575 399 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms