RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 KCNAB3O43448 404 aa11.24□□□□□ -0.61
SS18-219ENST00000581570 LY6HO94772 140 aa11.24□□□□□ -0.61
SS18-219ENST00000581570 PGM3O95394 542 aa11.24□□□□□ -0.61
SS18-219ENST00000581570 TGFAP01135 160 aa11.24□□□□□ -0.61
SS18-219ENST00000581570 KRT6AP02538 564 aa11.24□□□□□ -0.61
SS18-219ENST00000581570 KRT6BP04259 564 aa11.24□□□□□ -0.61
SS18-219ENST00000581570 RPS17P08708 135 aaKnown RBP11.24□□□□□ -0.61
SS18-219ENST00000581570 DHRS4L1P0CG22 281 aa11.24□□□□□ -0.61
SS18-219ENST00000581570 BMP4P12644 408 aa11.24□□□□□ -0.61
SS18-219ENST00000581570 APEHP13798 732 aaKnown RBP11.24□□□□□ -0.61
SS18-219ENST00000581570 DDCP20711 480 aa11.24□□□□□ -0.61
SS18-219ENST00000581570 PTAFRP25105 342 aa11.24□□□□□ -0.61
SS18-219ENST00000581570 TIA1P31483 386 aaKnown RBP eCLIP11.24□□□□□ -0.61
SS18-219ENST00000581570 EIF1P41567 113 aaKnown RBP11.24□□□□□ -0.61
SS18-219ENST00000581570 MAGEA4P43358 317 aa11.24□□□□□ -0.61
SS18-219ENST00000581570 KRT6CP48668 564 aa11.24□□□□□ -0.61
SS18-219ENST00000581570 SERPINB8P50452 374 aa11.24□□□□□ -0.61
SS18-219ENST00000581570 ACSM2AQ08AH3 577 aa11.24□□□□□ -0.61
SS18-219ENST00000581570 C2orf80Q0P641 193 aa11.24□□□□□ -0.61
SS18-219ENST00000581570 SLC29A2Q14542 456 aa11.24□□□□□ -0.61
SS18-219ENST00000581570 TMEM176BQ3YBM2 270 aaPredicted RBP11.24□□□□□ -0.61
SS18-219ENST00000581570 GLE1Q53GS7 698 aaKnown RBP11.24□□□□□ -0.61
SS18-219ENST00000581570 SPIN4Q56A73 249 aa11.24□□□□□ -0.61
SS18-219ENST00000581570 DMRTA1Q5VZB9 504 aa11.24□□□□□ -0.61
SS18-219ENST00000581570 ACSM2BQ68CK6 577 aa11.24□□□□□ -0.61
SS18-219ENST00000581570 DEPDC4Q8N2C3 294 aa11.24□□□□□ -0.61
SS18-219ENST00000581570 SLC43A2Q8N370 569 aa11.24□□□□□ -0.61
SS18-219ENST00000581570 GPR151Q8TDV0 419 aa11.24□□□□□ -0.61
SS18-219ENST00000581570 ZNF483Q8TF39 744 aaPredicted RBP11.24□□□□□ -0.61
SS18-219ENST00000581570 ELP4Q96EB1 424 aa11.24□□□□□ -0.61
SS18-219ENST00000581570 APIPQ96GX9 242 aa11.24□□□□□ -0.61
SS18-219ENST00000581570 KLHDC3Q9BQ90 382 aa11.24□□□□□ -0.61
SS18-219ENST00000581570 ERP44Q9BS26 406 aa11.24□□□□□ -0.61
SS18-219ENST00000581570 PRR14Q9BWN1 585 aa11.24□□□□□ -0.61
SS18-219ENST00000581570 EBPLQ9BY08 206 aa11.24□□□□□ -0.61
SS18-219ENST00000581570 ADAM19Q9H013 955 aa11.24□□□□□ -0.61
SS18-219ENST00000581570 GLIPR2Q9H4G4 154 aa11.24□□□□□ -0.61
SS18-219ENST00000581570 GRID1Q9ULK0 1009 aa11.24□□□□□ -0.61
SS18-219ENST00000581570 PMF1-BGLAPU3KQ54 211 aa11.24□□□□□ -0.61
SS18-219ENST00000581570 SVEP1Q4LDE5 3571 aa11.24□□□□□ -0.61
SS18-219ENST00000581570 YLPM1P49750 1951 aaKnown RBP11.23□□□□□ -0.61
SS18-219ENST00000581570 CADP27708 2225 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 ESYT3A0FGR9 886 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 OR5H1A6NKK0 313 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 GJE1A6NN92 205 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 VWC2LB2RUY7 222 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 C9JVG2 144 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 EFNA2O43921 213 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 ULK1O75385 1050 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 NGFRP08138 427 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 ANXA4P09525 319 aaPredicted RBP11.23□□□□□ -0.61
SS18-219ENST00000581570 LINGO3P0C6S8 592 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 ITGA2P17301 1181 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 ENPP1P22413 925 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 IGHV1-2P23083 117 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 CD40P25942 277 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 NTSP30990 170 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 NR4A2P43354 598 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 GSTM5P46439 218 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 PDLIM4P50479 330 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 ZNF83P51522 516 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 CHRNB3Q05901 458 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 BTKQ06187 659 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 SPOCK1Q08629 439 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 UAP1Q16222 522 aaPredicted RBP11.23□□□□□ -0.61
SS18-219ENST00000581570 CR1LQ2VPA4 569 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 ARL13AQ5H913 290 aaPredicted RBP11.23□□□□□ -0.61
SS18-219ENST00000581570 ZNF544Q6NX49 715 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 BHLHB9Q6PI77 547 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 KLHL17Q6TDP4 642 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 B3GLCTQ6Y288 498 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 MMGT1Q8N4V1 131 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 B4GALNT2Q8NHY0 566 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 CDC26Q8NHZ8 85 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 FAM110BQ8TC76 370 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 C3orf49Q96BT1 292 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 ZNF775Q96BV0 537 aaPredicted RBP11.23□□□□□ -0.61
SS18-219ENST00000581570 ACPTQ9BZG2 426 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 CXorf36Q9H7Y0 433 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 BCO1Q9HAY6 547 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 EQTNQ9NQ60 294 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 KLHL9Q9P2J3 617 aa11.23□□□□□ -0.61
SS18-219ENST00000581570 IGHV3-15A0A0B4J1V0 119 aa11.22□□□□□ -0.61
SS18-219ENST00000581570 NDUFS8O00217 210 aa11.22□□□□□ -0.61
SS18-219ENST00000581570 ZNF195O14628 629 aa11.22□□□□□ -0.61
SS18-219ENST00000581570 RGS14O43566 566 aa11.22□□□□□ -0.61
SS18-219ENST00000581570 HPGDP15428 266 aa11.22□□□□□ -0.61
SS18-219ENST00000581570 COX5AP20674 150 aa11.22□□□□□ -0.61
SS18-219ENST00000581570 EDNRAP25101 427 aa11.22□□□□□ -0.61
SS18-219ENST00000581570 ELK4P28324 431 aa11.22□□□□□ -0.61
SS18-219ENST00000581570 HSD17B3P37058 310 aa11.22□□□□□ -0.61
SS18-219ENST00000581570 PAFAH1B1P43034 410 aa11.22□□□□□ -0.61
SS18-219ENST00000581570 PRIM2P49643 509 aa11.22□□□□□ -0.61
SS18-219ENST00000581570 FOXF1Q12946 379 aa11.22□□□□□ -0.61
SS18-219ENST00000581570 GALNT18Q6P9A2 607 aa11.22□□□□□ -0.61
SS18-219ENST00000581570 MISPQ8IVT2 679 aa11.22□□□□□ -0.61
SS18-219ENST00000581570 ZNF433Q8N7K0 673 aaPredicted RBP11.22□□□□□ -0.61
SS18-219ENST00000581570 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.22□□□□□ -0.61
SS18-219ENST00000581570 ATP6V1C2Q8NEY4 427 aa11.22□□□□□ -0.61
SS18-219ENST00000581570 OR52N5Q8NH56 324 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms