RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 RABEP2Q9H5N1 569 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 TMEM185BQ9H7F4 350 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 MTHFD2LQ9H903 347 aaPredicted RBP5.93□□□□□ -1.46
TRAF4-213ENST00000578917 SLC24A3Q9HC58 644 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 NPHS2Q9NP85 383 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 TIGARQ9NQ88 270 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 SDR39U1Q9NRG7 319 aaPredicted RBP5.93□□□□□ -1.46
TRAF4-213ENST00000578917 ZIM2Q9NZV7 527 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 CCDC167Q9P0B6 97 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 ZNF629Q9UEG4 869 aaPredicted RBP5.93□□□□□ -1.46
TRAF4-213ENST00000578917 LIPT1Q9Y234 373 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 WDR45Q9Y484 360 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 AP4B1Q9Y6B7 739 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 ADGRG4Q8IZF6 3080 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 SPENQ96T58 3664 aaKnown RBP5.92□□□□□ -1.46
TRAF4-213ENST00000578917 POLQO75417 2590 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 IGLV3-32A0A0A0MS00 114 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 GJE1A6NN92 205 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 C5orf58C9J3I9 102 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 C19orf84I3L1E1 186 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 NR5A2O00482 541 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 ZNF195O14628 629 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 EIF4E2O60573 245 aaKnown RBP5.92□□□□□ -1.46
TRAF4-213ENST00000578917 SCN2BO60939 215 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 SMNDC1O75940 238 aaKnown RBP eCLIP5.92□□□□□ -1.462e-10■■□□□ 13.8
TRAF4-213ENST00000578917 SASH3O75995 380 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 TOXO94900 526 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 H6PDO95479 791 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 CSTAP01040 98 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 UBTFL6P0CB48 400 aaPredicted RBP5.92□□□□□ -1.46
TRAF4-213ENST00000578917 TROVE2P10155 538 aaKnown RBP eCLIP5.92□□□□□ -1.46
TRAF4-213ENST00000578917 IL7RP16871 459 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 ZNF708P17019 499 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 IL12AP29459 219 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 CEACAM8P31997 349 aaPredicted RBP5.92□□□□□ -1.46
TRAF4-213ENST00000578917 RYKP34925 604 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 CDKN2CP42773 168 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 KCNJ5P48544 419 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 P2RX1P51575 399 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 CLDN18P56856 261 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 CLDN20P56880 219 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 CARD18P57730 90 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 B3GALT5-AS1P59052 145 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 EEF1A1P68104 462 aaKnown RBP5.92□□□□□ -1.46
TRAF4-213ENST00000578917 TXNL4AP83876 142 aaKnown RBP5.92□□□□□ -1.46
TRAF4-213ENST00000578917 ZNF117Q03924 483 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 CBFBQ13951 182 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 CD226Q15762 336 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 NDUFAF6Q330K2 333 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 AGKQ53H12 422 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.92□□□□□ -1.46
TRAF4-213ENST00000578917 EEF1A1P5Q5VTE0 462 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 FBXW10Q5XX13 1052 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 SAXO2Q658L1 398 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 HBMQ6B0K9 141 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 GTF2IRD2BQ6EKJ0 949 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 POMZP3Q6PJE2 187 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 PLXDC2Q6UX71 529 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 OLIG3Q7RTU3 272 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 GDF7Q7Z4P5 450 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 GTF2IRD2Q86UP8 949 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 KIF18BQ86Y91 864 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 LIX1LQ8IVB5 337 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 GCNT2Q8N0V5 402 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 CHDHQ8NE62 594 aaPredicted RBP5.92□□□□□ -1.46
TRAF4-213ENST00000578917 OR9I1Q8NGQ6 314 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 OR5W2Q8NH69 310 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 ZNF563Q8TA94 476 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 MIPOL1Q8TD10 442 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 RNF138Q8WVD3 245 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 RNF145Q96MT1 663 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 TRNT1Q96Q11 434 aaKnown RBP5.92□□□□□ -1.46
TRAF4-213ENST00000578917 SPOCK3Q9BQ16 436 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 EBF4Q9BQW3 602 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 THUMPD3Q9BV44 507 aaKnown RBP5.92□□□□□ -1.46
TRAF4-213ENST00000578917 NMUR2Q9GZQ4 415 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 POLE3Q9NRF9 147 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 SERINC1Q9NRX5 453 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.92□□□□□ -1.46
TRAF4-213ENST00000578917 MED17Q9NVC6 651 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 MCTS1Q9ULC4 181 aaKnown RBP5.92□□□□□ -1.46
TRAF4-213ENST00000578917 ZNF232Q9UNY5 417 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 DNAJC13O75165 2243 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 NINQ8N4C6 2090 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 APCP25054 2843 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 DCHS2Q6V1P9 2916 aa5.92□□□□□ -1.46
TRAF4-213ENST00000578917 MBD3L4A6NDZ8 208 aaPredicted RBP5.91□□□□□ -1.46
TRAF4-213ENST00000578917 MBD3L3A6NE82 208 aaPredicted RBP5.91□□□□□ -1.46
TRAF4-213ENST00000578917 MBD3L5A6NJ08 208 aaPredicted RBP5.91□□□□□ -1.46
TRAF4-213ENST00000578917 EVPLLA8MZ36 301 aa5.91□□□□□ -1.46
TRAF4-213ENST00000578917 KDM4EB2RXH2 506 aaPredicted RBP5.91□□□□□ -1.46
TRAF4-213ENST00000578917 H0YC42 278 aa5.91□□□□□ -1.46
TRAF4-213ENST00000578917 SYT5O00445 386 aa5.91□□□□□ -1.46
TRAF4-213ENST00000578917 HMGN4O00479 90 aa5.91□□□□□ -1.46
TRAF4-213ENST00000578917 CASKO14936 926 aa5.91□□□□□ -1.46
TRAF4-213ENST00000578917 TNFRSF21O75509 655 aa5.91□□□□□ -1.46
TRAF4-213ENST00000578917 UGT2B17O75795 530 aa5.91□□□□□ -1.46
TRAF4-213ENST00000578917 RCBTB2O95199 551 aa5.91□□□□□ -1.46
TRAF4-213ENST00000578917 LINGO3P0C6S8 592 aa5.91□□□□□ -1.46
TRAF4-213ENST00000578917 PABPC4LP0CB38 370 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms