RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 ZNF775Q96BV0 537 aaPredicted RBP12.37□□□□□ -0.43
PPP4R1-206ENST00000577779 SNX18Q96RF0 628 aa12.37□□□□□ -0.43
PPP4R1-206ENST00000577779 C1QTNF6Q9BXI9 259 aa12.37□□□□□ -0.43
PPP4R1-206ENST00000577779 CXorf36Q9H7Y0 433 aa12.37□□□□□ -0.43
PPP4R1-206ENST00000577779 BCO1Q9HAY6 547 aa12.37□□□□□ -0.43
PPP4R1-206ENST00000577779 HHATLQ9HCP6 504 aa12.37□□□□□ -0.43
PPP4R1-206ENST00000577779 GIMAP4Q9NUV9 329 aa12.37□□□□□ -0.43
PPP4R1-206ENST00000577779 NTMQ9P121 344 aa12.37□□□□□ -0.43
PPP4R1-206ENST00000577779 KLHL9Q9P2J3 617 aa12.37□□□□□ -0.43
PPP4R1-206ENST00000577779 SLC25A15Q9Y619 301 aa12.37□□□□□ -0.43
PPP4R1-206ENST00000577779 IGHV3-15A0A0B4J1V0 119 aa12.36□□□□□ -0.43
PPP4R1-206ENST00000577779 CIB4A0PJX0 185 aa12.36□□□□□ -0.43
PPP4R1-206ENST00000577779 TACSTD2P09758 323 aa12.36□□□□□ -0.43
PPP4R1-206ENST00000577779 LIMS1P48059 325 aa12.36□□□□□ -0.43
PPP4R1-206ENST00000577779 ARL4CP56559 192 aa12.36□□□□□ -0.43
PPP4R1-206ENST00000577779 TRA2BP62995 288 aaKnown RBP12.36□□□□□ -0.43
PPP4R1-206ENST00000577779 MST1LQ2TV78 715 aa12.36□□□□□ -0.43
PPP4R1-206ENST00000577779 SHQ1Q6PI26 577 aaKnown RBP12.36□□□□□ -0.43
PPP4R1-206ENST00000577779 UGT2A3Q6UWM9 527 aa12.36□□□□□ -0.43
PPP4R1-206ENST00000577779 USP43Q70EL4 1123 aa12.36□□□□□ -0.43
PPP4R1-206ENST00000577779 ZNF100Q8IYN0 542 aa12.36□□□□□ -0.43
PPP4R1-206ENST00000577779 FAM9CQ8IZT9 166 aa12.36□□□□□ -0.43
PPP4R1-206ENST00000577779 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.36□□□□□ -0.43
PPP4R1-206ENST00000577779 POC1BQ8TC44 478 aa12.36□□□□□ -0.43
PPP4R1-206ENST00000577779 ACTRT2Q8TDY3 377 aa12.36□□□□□ -0.43
PPP4R1-206ENST00000577779 JMJD8Q96S16 334 aa12.36□□□□□ -0.43
PPP4R1-206ENST00000577779 RBBP8Q99708 897 aa12.36□□□□□ -0.43
PPP4R1-206ENST00000577779 PSD2Q9BQI7 771 aa12.36□□□□□ -0.43
PPP4R1-206ENST00000577779 NOL11Q9H8H0 719 aaKnown RBP12.36□□□□□ -0.43
PPP4R1-206ENST00000577779 LZTFL1Q9NQ48 299 aa12.36□□□□□ -0.43
PPP4R1-206ENST00000577779 TRAF6Q9Y4K3 522 aa12.36□□□□□ -0.43
PPP4R1-206ENST00000577779 CCT8L1PA6NM43 557 aa12.35□□□□□ -0.43
PPP4R1-206ENST00000577779 C3orf80F5H4A9 247 aa12.35□□□□□ -0.43
PPP4R1-206ENST00000577779 OR7A17O14581 309 aa12.35□□□□□ -0.43
PPP4R1-206ENST00000577779 RGS14O43566 566 aa12.35□□□□□ -0.43
PPP4R1-206ENST00000577779 LILRA1O75019 489 aa12.35□□□□□ -0.43
PPP4R1-206ENST00000577779 STAMBPO95630 424 aa12.35□□□□□ -0.43
PPP4R1-206ENST00000577779 ENPP1P22413 925 aa12.35□□□□□ -0.43
PPP4R1-206ENST00000577779 MPIP34949 423 aa12.35□□□□□ -0.43
PPP4R1-206ENST00000577779 CCNG1P51959 295 aa12.35□□□□□ -0.43
PPP4R1-206ENST00000577779 ALDH18A1P54886 795 aaKnown RBP12.35□□□□□ -0.43
PPP4R1-206ENST00000577779 SLC18A2Q05940 514 aa12.35□□□□□ -0.43
PPP4R1-206ENST00000577779 FASTKD3Q14CZ7 662 aaKnown RBP12.35□□□□□ -0.43
PPP4R1-206ENST00000577779 ZNHIT3Q15649 155 aaPredicted RBP12.35□□□□□ -0.43
PPP4R1-206ENST00000577779 THSD4Q6ZMP0 1018 aa12.35□□□□□ -0.43
PPP4R1-206ENST00000577779 GLCCI1Q86VQ1 547 aa12.35□□□□□ -0.43
PPP4R1-206ENST00000577779 SVOPLQ8N434 492 aa12.35□□□□□ -0.43
PPP4R1-206ENST00000577779 GATSQ8NAP1 163 aa12.35□□□□□ -0.43
PPP4R1-206ENST00000577779 TOR1AIP2Q8NFQ8 470 aa12.35□□□□□ -0.43
PPP4R1-206ENST00000577779 SH3YL1Q96HL8 342 aaPredicted RBP12.35□□□□□ -0.43
PPP4R1-206ENST00000577779 ELOVL6Q9H5J4 265 aa12.35□□□□□ -0.43
PPP4R1-206ENST00000577779 ARMCX1Q9P291 453 aa12.35□□□□□ -0.43
PPP4R1-206ENST00000577779 ING1Q9UK53 422 aaPredicted RBP12.35□□□□□ -0.43
PPP4R1-206ENST00000577779 GJE1A6NN92 205 aa12.34□□□□□ -0.43
PPP4R1-206ENST00000577779 CXorf49A8MYA2 514 aaPredicted RBP12.34□□□□□ -0.43
PPP4R1-206ENST00000577779 ALG1L2C9J202 215 aa12.34□□□□□ -0.43
PPP4R1-206ENST00000577779 ATP6V1G2-DDX39BF2Z307 99 aa12.34□□□□□ -0.43
PPP4R1-206ENST00000577779 PGRMC1O00264 195 aaKnown RBP12.34□□□□□ -0.43
PPP4R1-206ENST00000577779 IL3P08700 152 aa12.34□□□□□ -0.43
PPP4R1-206ENST00000577779 GIFP27352 417 aa12.34□□□□□ -0.43
PPP4R1-206ENST00000577779 ELK4P28324 431 aa12.34□□□□□ -0.43
PPP4R1-206ENST00000577779 EIF1P41567 113 aaKnown RBP12.34□□□□□ -0.43
PPP4R1-206ENST00000577779 ARFIP2P53365 341 aa12.34□□□□□ -0.43
PPP4R1-206ENST00000577779 RASGEF1BQ0VAM2 473 aa12.34□□□□□ -0.43
PPP4R1-206ENST00000577779 PDIA2Q13087 525 aaKnown RBP12.34□□□□□ -0.43
PPP4R1-206ENST00000577779 CCNIQ14094 377 aa12.34□□□□□ -0.43
PPP4R1-206ENST00000577779 TMEM176BQ3YBM2 270 aaPredicted RBP12.34□□□□□ -0.43
PPP4R1-206ENST00000577779 CMC1Q7Z7K0 106 aa12.34□□□□□ -0.43
PPP4R1-206ENST00000577779 GALNT5Q7Z7M9 940 aa12.34□□□□□ -0.43
PPP4R1-206ENST00000577779 UBE2J2Q8N2K1 259 aa12.34□□□□□ -0.43
PPP4R1-206ENST00000577779 C1orf52Q8N6N3 182 aaKnown RBP12.34□□□□□ -0.43
PPP4R1-206ENST00000577779 MRPL24Q96A35 216 aaKnown RBP12.34□□□□□ -0.43
PPP4R1-206ENST00000577779 BBS4Q96RK4 519 aa12.34□□□□□ -0.43
PPP4R1-206ENST00000577779 CPNE1Q99829 537 aa12.34□□□□□ -0.43
PPP4R1-206ENST00000577779 SLC35C2Q9NQQ7 365 aa12.34□□□□□ -0.43
PPP4R1-206ENST00000577779 FARSBQ9NSD9 589 aaKnown RBP12.34□□□□□ -0.43
PPP4R1-206ENST00000577779 TNPO3Q9Y5L0 923 aaKnown RBP12.34□□□□□ -0.43
PPP4R1-206ENST00000577779 GOLGA6L10A0A0M3HER8 536 aa12.33□□□□□ -0.44
PPP4R1-206ENST00000577779 B4DSR2 109 aa12.33□□□□□ -0.44
PPP4R1-206ENST00000577779 KCNH1O95259 989 aa12.33□□□□□ -0.44
PPP4R1-206ENST00000577779 SLU7O95391 586 aaKnown RBP12.33□□□□□ -0.44
PPP4R1-206ENST00000577779 IGKV1D-16P01601 117 aa12.33□□□□□ -0.44
PPP4R1-206ENST00000577779 IGHV3-9P01782 118 aa12.33□□□□□ -0.44
PPP4R1-206ENST00000577779 IVDP26440 423 aa12.33□□□□□ -0.44
PPP4R1-206ENST00000577779 FOXF1Q12946 379 aa12.33□□□□□ -0.44
PPP4R1-206ENST00000577779 TMEM107Q6UX40 140 aa12.33□□□□□ -0.44
PPP4R1-206ENST00000577779 ATP6V1C2Q8NEY4 427 aa12.33□□□□□ -0.44
PPP4R1-206ENST00000577779 RHEBL1Q8TAI7 183 aa12.33□□□□□ -0.44
PPP4R1-206ENST00000577779 ZFP90Q8TF47 636 aa12.33□□□□□ -0.44
PPP4R1-206ENST00000577779 CDKL2Q92772 493 aa12.33□□□□□ -0.44
PPP4R1-206ENST00000577779 ZNF300Q96RE9 604 aaPredicted RBP12.33□□□□□ -0.44
PPP4R1-206ENST00000577779 KLHDC3Q9BQ90 382 aa12.33□□□□□ -0.44
PPP4R1-206ENST00000577779 SAP130Q9H0E3 1048 aa12.33□□□□□ -0.44
PPP4R1-206ENST00000577779 COQ10BQ9H8M1 238 aa12.33□□□□□ -0.44
PPP4R1-206ENST00000577779 C3orf14Q9HBI5 128 aa12.33□□□□□ -0.44
PPP4R1-206ENST00000577779 C19orf53Q9UNZ5 99 aaPredicted RBP12.33□□□□□ -0.44
PPP4R1-206ENST00000577779 USP22Q9UPT9 525 aa12.33□□□□□ -0.44
PPP4R1-206ENST00000577779 RYR3Q15413 4870 aa12.33□□□□□ -0.44
PPP4R1-206ENST00000577779 A0A087WV62 115 aa12.32□□□□□ -0.44
PPP4R1-206ENST00000577779 GXYLT2A0PJZ3 443 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms