RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 GPAT3Q53EU6 434 aa21.22■□□□□ 0.99
SNF8-217ENST00000576353 BLOC1S3Q6QNY0 202 aa21.22■□□□□ 0.99
SNF8-217ENST00000576353 DNAJC14Q6Y2X3 702 aaPredicted RBP21.22■□□□□ 0.99
SNF8-217ENST00000576353 LIX1LQ8IVB5 337 aa21.22■□□□□ 0.99
SNF8-217ENST00000576353 UBQLNLQ8IYU4 475 aa21.22■□□□□ 0.99
SNF8-217ENST00000576353 ZFP90Q8TF47 636 aa21.22■□□□□ 0.99
SNF8-217ENST00000576353 MARVELD3Q96A59 401 aa21.22■□□□□ 0.99
SNF8-217ENST00000576353 TRNT1Q96Q11 434 aaKnown RBP21.22■□□□□ 0.99
SNF8-217ENST00000576353 SAP130Q9H0E3 1048 aa21.22■□□□□ 0.99
SNF8-217ENST00000576353 RABEP2Q9H5N1 569 aa21.22■□□□□ 0.99
SNF8-217ENST00000576353 NPHS2Q9NP85 383 aa21.22■□□□□ 0.99
SNF8-217ENST00000576353 DCTN4Q9UJW0 460 aa21.22■□□□□ 0.99
SNF8-217ENST00000576353 ICAM5Q9UMF0 924 aa21.22■□□□□ 0.99
SNF8-217ENST00000576353 TRIM33Q9UPN9 1127 aa21.22■□□□□ 0.99
SNF8-217ENST00000576353 ZNF264O43296 627 aa21.21■□□□□ 0.99
SNF8-217ENST00000576353 KIAA0513O60268 411 aa21.21■□□□□ 0.99
SNF8-217ENST00000576353 UGT2B17O75795 530 aa21.21■□□□□ 0.99
SNF8-217ENST00000576353 NUDT14O95848 222 aa21.21■□□□□ 0.99
SNF8-217ENST00000576353 C1QCP02747 245 aa21.21■□□□□ 0.99
SNF8-217ENST00000576353 UBL4AP11441 157 aa21.21■□□□□ 0.99
SNF8-217ENST00000576353 RNF144AP50876 292 aaPredicted RBP21.21■□□□□ 0.99
SNF8-217ENST00000576353 SQLEQ14534 574 aa21.21■□□□□ 0.99
SNF8-217ENST00000576353 PLPPR5Q32ZL2 321 aa21.21■□□□□ 0.99
SNF8-217ENST00000576353 TYW3Q6IPR3 259 aaKnown RBP21.21■□□□□ 0.99
SNF8-217ENST00000576353 ZNF619Q8N2I2 560 aa21.21■□□□□ 0.99
SNF8-217ENST00000576353 PNPT1Q8TCS8 783 aaKnown RBP21.21■□□□□ 0.99
SNF8-217ENST00000576353 GTF2H4Q92759 462 aa21.21■□□□□ 0.99
SNF8-217ENST00000576353 THOC1Q96FV9 657 aaKnown RBP21.21■□□□□ 0.99
SNF8-217ENST00000576353 ZFP3Q96NJ6 502 aa21.21■□□□□ 0.99
SNF8-217ENST00000576353 SPOCK3Q9BQ16 436 aa21.21■□□□□ 0.99
SNF8-217ENST00000576353 TPT1P8Q9HAU6 139 aa21.21■□□□□ 0.99
SNF8-217ENST00000576353 SLC6A13Q9NSD5 602 aa21.21■□□□□ 0.99
SNF8-217ENST00000576353 CCDC167Q9P0B6 97 aa21.21■□□□□ 0.99
SNF8-217ENST00000576353 KCNE5Q9UJ90 142 aa21.21■□□□□ 0.99
SNF8-217ENST00000576353 UNC79Q9P2D8 2635 aa21.21■□□□□ 0.99
SNF8-217ENST00000576353 SHISA8B8ZZ34 492 aa21.2■□□□□ 0.98
SNF8-217ENST00000576353 ATP8B1O43520 1251 aa21.2■□□□□ 0.98
SNF8-217ENST00000576353 TNFRSF21O75509 655 aa21.2■□□□□ 0.98
SNF8-217ENST00000576353 CTSSP25774 331 aa21.2■□□□□ 0.98
SNF8-217ENST00000576353 TFF3Q07654 80 aa21.2■□□□□ 0.98
SNF8-217ENST00000576353 FUT5Q11128 374 aa21.2■□□□□ 0.98
SNF8-217ENST00000576353 CBLN3Q6UW01 205 aa21.2■□□□□ 0.98
SNF8-217ENST00000576353 FRRS1Q6ZNA5 592 aa21.2■□□□□ 0.98
SNF8-217ENST00000576353 EIF3MQ7L2H7 374 aaKnown RBP21.2■□□□□ 0.98
SNF8-217ENST00000576353 OLIG3Q7RTU3 272 aa21.2■□□□□ 0.98
SNF8-217ENST00000576353 GRAMD2AQ8IUY3 354 aa21.2■□□□□ 0.98
SNF8-217ENST00000576353 FUNDC1Q8IVP5 155 aa21.2■□□□□ 0.98
SNF8-217ENST00000576353 C9orf106Q8NAJ2 232 aa21.2■□□□□ 0.98
SNF8-217ENST00000576353 NAXEQ8NCW5 288 aa21.2■□□□□ 0.98
SNF8-217ENST00000576353 TOR1AIP2Q8NFQ8 470 aa21.2■□□□□ 0.98
SNF8-217ENST00000576353 MED12Q93074 2177 aa21.19■□□□□ 0.98
SNF8-217ENST00000576353 PRAMEF27A3QJZ7 478 aa21.19■□□□□ 0.98
SNF8-217ENST00000576353 NR5A2O00482 541 aa21.19■□□□□ 0.98
SNF8-217ENST00000576353 SEC14L5O43304 696 aa21.19■□□□□ 0.98
SNF8-217ENST00000576353 OIP5O43482 229 aa21.19■□□□□ 0.98
SNF8-217ENST00000576353 RCBTB2O95199 551 aa21.19■□□□□ 0.98
SNF8-217ENST00000576353 H6PDO95479 791 aa21.19■□□□□ 0.98
SNF8-217ENST00000576353 CSTAP01040 98 aa21.19■□□□□ 0.98
SNF8-217ENST00000576353 LINGO3P0C6S8 592 aa21.19■□□□□ 0.98
SNF8-217ENST00000576353 NCF2P19878 526 aaPredicted RBP21.19■□□□□ 0.98
SNF8-217ENST00000576353 OPRM1P35372 400 aa21.19■□□□□ 0.98
SNF8-217ENST00000576353 SUCLG1P53597 346 aaKnown RBP21.19■□□□□ 0.98
SNF8-217ENST00000576353 RPS3AP61247 264 aaKnown RBP21.19■□□□□ 0.98
SNF8-217ENST00000576353 COX20Q5RI15 118 aa21.19■□□□□ 0.98
SNF8-217ENST00000576353 SLC2A7Q6PXP3 512 aa21.19■□□□□ 0.98
SNF8-217ENST00000576353 OR5W2Q8NH69 310 aa21.19■□□□□ 0.98
SNF8-217ENST00000576353 RFWD2Q8NHY2 731 aa21.19■□□□□ 0.98
SNF8-217ENST00000576353 SMPDL3BQ92485 455 aa21.19■□□□□ 0.98
SNF8-217ENST00000576353 PMM1Q92871 262 aa21.19■□□□□ 0.98
SNF8-217ENST00000576353 SPDL1Q96EA4 605 aa21.19■□□□□ 0.98
SNF8-217ENST00000576353 RNF145Q96MT1 663 aa21.19■□□□□ 0.98
SNF8-217ENST00000576353 LAT2Q9GZY6 243 aa21.19■□□□□ 0.98
SNF8-217ENST00000576353 ENKD1Q9H0I2 346 aa21.19■□□□□ 0.98
SNF8-217ENST00000576353 THUMPD1Q9NXG2 353 aaKnown RBP21.19■□□□□ 0.98
SNF8-217ENST00000576353 CLCF1Q9UBD9 225 aa21.19■□□□□ 0.98
SNF8-217ENST00000576353 GPC6Q9Y625 555 aaPredicted RBP21.19■□□□□ 0.98
SNF8-217ENST00000576353 A0A096LPI6 279 aa21.18■□□□□ 0.98
SNF8-217ENST00000576353 A0A0G2JND7 137 aa21.18■□□□□ 0.98
SNF8-217ENST00000576353 IL18BPO95998 194 aa21.18■□□□□ 0.98
SNF8-217ENST00000576353 TMIGD3P0DMS9 266 aaPredicted RBP21.18■□□□□ 0.98
SNF8-217ENST00000576353 NR2F1P10589 423 aa21.18■□□□□ 0.98
SNF8-217ENST00000576353 BMP5P22003 454 aa21.18■□□□□ 0.98
SNF8-217ENST00000576353 ME2P23368 584 aa21.18■□□□□ 0.98
SNF8-217ENST00000576353 PSMA4P25789 261 aaKnown RBP21.18■□□□□ 0.98
SNF8-217ENST00000576353 ADH6P28332 368 aa21.18■□□□□ 0.98
SNF8-217ENST00000576353 CRATP43155 626 aa21.18■□□□□ 0.98
SNF8-217ENST00000576353 ZNF136P52737 540 aa21.18■□□□□ 0.98
SNF8-217ENST00000576353 CLDN15P56746 228 aa21.18■□□□□ 0.98
SNF8-217ENST00000576353 CLDN20P56880 219 aa21.18■□□□□ 0.98
SNF8-217ENST00000576353 RAC1P63000 192 aa21.18■□□□□ 0.98
SNF8-217ENST00000576353 CHRNEQ04844 493 aa21.18■□□□□ 0.98
SNF8-217ENST00000576353 CBFBQ13951 182 aa21.18■□□□□ 0.98
SNF8-217ENST00000576353 SYPL1Q16563 259 aa21.18■□□□□ 0.98
SNF8-217ENST00000576353 NDUFAF6Q330K2 333 aa21.18■□□□□ 0.98
SNF8-217ENST00000576353 AGKQ53H12 422 aa21.18■□□□□ 0.98
SNF8-217ENST00000576353 LRRC74BQ6ZQY2 392 aa21.18■□□□□ 0.98
SNF8-217ENST00000576353 P4HA3Q7Z4N8 544 aa21.18■□□□□ 0.98
SNF8-217ENST00000576353 TMCO5AQ8N6Q1 288 aa21.18■□□□□ 0.98
SNF8-217ENST00000576353 ANKFN1Q8N957 763 aa21.18■□□□□ 0.98
SNF8-217ENST00000576353 GPR119Q8TDV5 335 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms