RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 OR52B6Q8NGF0 335 aa4.44□□□□□ -1.7
CDC27-215ENST00000573550 PHF10Q8WUB8 498 aaKnown RBP4.44□□□□□ -1.7
CDC27-215ENST00000573550 SLC38A5Q8WUX1 472 aa4.44□□□□□ -1.7
CDC27-215ENST00000573550 RMDN1Q96DB5 314 aa4.44□□□□□ -1.7
CDC27-215ENST00000573550 SLC47A1Q96FL8 570 aa4.44□□□□□ -1.7
CDC27-215ENST00000573550 ITCHQ96J02 903 aa4.44□□□□□ -1.7
CDC27-215ENST00000573550 ZNF641Q96N77 438 aaPredicted RBP4.44□□□□□ -1.7
CDC27-215ENST00000573550 MUS81Q96NY9 551 aa4.44□□□□□ -1.7
CDC27-215ENST00000573550 MBOAT4Q96T53 435 aa4.44□□□□□ -1.7
CDC27-215ENST00000573550 PITX2Q99697 317 aa4.44□□□□□ -1.7
CDC27-215ENST00000573550 PSD2Q9BQI7 771 aa4.44□□□□□ -1.7
CDC27-215ENST00000573550 MROQ9BYG7 248 aa4.44□□□□□ -1.7
CDC27-215ENST00000573550 DUSP21Q9H596 190 aa4.44□□□□□ -1.7
CDC27-215ENST00000573550 ACTR8Q9H981 624 aa4.44□□□□□ -1.7
CDC27-215ENST00000573550 IL1RL2Q9HB29 575 aa4.44□□□□□ -1.7
CDC27-215ENST00000573550 PARVBQ9HBI1 364 aa4.44□□□□□ -1.7
CDC27-215ENST00000573550 LRTM1Q9HBL6 345 aa4.44□□□□□ -1.7
CDC27-215ENST00000573550 PAK1IP1Q9NWT1 392 aaPredicted RBP4.44□□□□□ -1.7
CDC27-215ENST00000573550 IRAK4Q9NWZ3 460 aa4.44□□□□□ -1.7
CDC27-215ENST00000573550 C1orf109Q9NX04 203 aa4.44□□□□□ -1.7
CDC27-215ENST00000573550 IL17CQ9P0M4 197 aa4.44□□□□□ -1.7
CDC27-215ENST00000573550 NFKBIL1Q9UBC1 381 aaPredicted RBP4.44□□□□□ -1.7
CDC27-215ENST00000573550 OPTCQ9UBM4 332 aa4.44□□□□□ -1.7
CDC27-215ENST00000573550 LHX3Q9UBR4 397 aa4.44□□□□□ -1.7
CDC27-215ENST00000573550 RPS6KA6Q9UK32 745 aa4.44□□□□□ -1.7
CDC27-215ENST00000573550 IKZF3Q9UKT9 509 aa4.44□□□□□ -1.7
CDC27-215ENST00000573550 ERGIC3Q9Y282 383 aa4.44□□□□□ -1.7
CDC27-215ENST00000573550 KLHL20Q9Y2M5 609 aa4.44□□□□□ -1.7
CDC27-215ENST00000573550 POLR3HQ9Y535 204 aaPredicted RBP4.44□□□□□ -1.7
CDC27-215ENST00000573550 TIMM22Q9Y584 194 aa4.44□□□□□ -1.7
CDC27-215ENST00000573550 SNX5Q9Y5X3 404 aa4.44□□□□□ -1.7
CDC27-215ENST00000573550 PIAS3Q9Y6X2 628 aa4.44□□□□□ -1.7
CDC27-215ENST00000573550 ANAPC1Q9H1A4 1944 aa4.44□□□□□ -1.7
CDC27-215ENST00000573550 MN1Q10571 1320 aaPredicted RBP4.44□□□□□ -1.7
CDC27-215ENST00000573550 HELZP42694 1942 aaKnown RBP4.43□□□□□ -1.7
CDC27-215ENST00000573550 PLXNB3Q9ULL4 1909 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 IGLV3-16A0A075B6K0 115 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 A0A0D9SEW6 157 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 ISPDA4D126 451 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 ZNF840PA6NDX5 716 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 SAGE2PA6NJ88 616 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 CLDN24A6NM45 220 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 P2RY10O00398 339 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 MANBAO00462 879 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 CXCR6O00574 342 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 CCL22O00626 93 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 BCKDKO14874 412 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 LINC01565O15544 149 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 HCRTR2O43614 444 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 JRKO75564 520 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 SLC25A12O75746 678 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 PGLSO95336 258 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 OLFM2O95897 454 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 CST1P01037 141 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 CRYAAP02489 173 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 SEMG1P04279 462 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 ASGR1P07306 291 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 C8GP07360 202 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 ABCB1P08183 1280 aaPredicted RBP4.43□□□□□ -1.7
CDC27-215ENST00000573550 SRPRAP08240 638 aaKnown RBP4.43□□□□□ -1.7
CDC27-215ENST00000573550 HTR1AP08908 422 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 OR4Q2P0C623 313 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 OCM2P0CE71 109 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 OCMP0CE72 109 aaPredicted RBP4.43□□□□□ -1.7
CDC27-215ENST00000573550 NELFEP18615 380 aaKnown RBP4.43□□□□□ -1.7
CDC27-215ENST00000573550 ATF6P18850 670 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 CD53P19397 219 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 EFNA1P20827 205 aaPredicted RBP4.43□□□□□ -1.7
CDC27-215ENST00000573550 PCMT1P22061 227 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 EEF1B2P24534 225 aaKnown RBP4.43□□□□□ -1.7
CDC27-215ENST00000573550 PRDX3P30048 256 aaKnown RBP4.43□□□□□ -1.7
CDC27-215ENST00000573550 SHMT2P34897 504 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 NSG1P42857 185 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 RGRP47804 291 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 BCAP31P51572 246 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 BMXP51813 675 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 ARHGDIAP52565 204 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 HUNKP57058 714 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 MTPNP58546 118 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 SLC35A2P78381 396 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 ARF5P84085 180 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 SREBF2Q12772 1141 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 FADDQ13158 208 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 TMED1Q13445 227 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 NFATC2Q13469 925 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 KCNC3Q14003 757 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 OXA1LQ15070 435 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 MED22Q15528 200 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 NEDD8Q15843 81 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 FAM174BQ3ZCQ3 159 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 TOR1AIP1Q5JTV8 583 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 MPP7Q5T2T1 576 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 HECTD3Q5T447 861 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 GPRC6AQ5T6X5 926 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 SYT6Q5T7P8 510 aaPredicted RBP4.43□□□□□ -1.7
CDC27-215ENST00000573550 ARMC12Q5T9G4 340 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 TPGS2Q68CL5 300 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 LCN10Q6JVE6 187 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 NEK5Q6P3R8 708 aa4.43□□□□□ -1.7
CDC27-215ENST00000573550 FUT10Q6P4F1 479 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms