RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 GATSQ8NAP1 163 aa9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 TRIM58Q8NG06 486 aa9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 RHEBL1Q8TAI7 183 aa9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 ZNF75CPQ92670 426 aaPredicted RBP9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 ATP6V1E2Q96A05 226 aa9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 ZNF300Q96RE9 604 aaPredicted RBP9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 SNX18Q96RF0 628 aa9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 CPNE1Q99829 537 aa9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 ZNF747Q9BV97 191 aa9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 RBM4Q9BWF3 364 aaKnown RBP9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 COQ10BQ9H8M1 238 aa9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 Q9N2J8 555 aa9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 SENP1Q9P0U3 644 aa9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 NTMQ9P121 344 aa9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 MRTO4Q9UKD2 239 aaKnown RBP9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 PCDHB10Q9UN67 800 aa9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 A0A087WV62 115 aa9.13□□□□□ -0.95
CTDNEP1-202ENST00000570380 GXYLT2A0PJZ3 443 aa9.13□□□□□ -0.95
CTDNEP1-202ENST00000570380 ALG1L2C9J202 215 aa9.13□□□□□ -0.95
CTDNEP1-202ENST00000570380 E7ESA3 106 aa9.13□□□□□ -0.95
CTDNEP1-202ENST00000570380 PGRMC1O00264 195 aaKnown RBP9.13□□□□□ -0.95
CTDNEP1-202ENST00000570380 TP73O15350 636 aa9.13□□□□□ -0.95
CTDNEP1-202ENST00000570380 SLU7O95391 586 aaKnown RBP9.13□□□□□ -0.95
CTDNEP1-202ENST00000570380 PSMG1O95456 288 aa9.13□□□□□ -0.95
CTDNEP1-202ENST00000570380 PDYNP01213 254 aa9.13□□□□□ -0.95
CTDNEP1-202ENST00000570380 LINGO3P0C6S8 592 aa9.13□□□□□ -0.95
CTDNEP1-202ENST00000570380 GIFP27352 417 aa9.13□□□□□ -0.95
CTDNEP1-202ENST00000570380 SSTR1P30872 391 aa9.13□□□□□ -0.95
CTDNEP1-202ENST00000570380 GP5P40197 560 aa9.13□□□□□ -0.95
CTDNEP1-202ENST00000570380 ZNF41P51814 821 aaPredicted RBP9.13□□□□□ -0.95
CTDNEP1-202ENST00000570380 CCNG1P51959 295 aa9.13□□□□□ -0.95
CTDNEP1-202ENST00000570380 PSMD4P55036 377 aaKnown RBP9.13□□□□□ -0.95
CTDNEP1-202ENST00000570380 TRAF3Q13114 568 aa9.13□□□□□ -0.95
CTDNEP1-202ENST00000570380 PRSS53Q2L4Q9 553 aa9.13□□□□□ -0.95
CTDNEP1-202ENST00000570380 TMEM176BQ3YBM2 270 aaPredicted RBP9.13□□□□□ -0.95
CTDNEP1-202ENST00000570380 TCHHL1Q5QJ38 904 aaPredicted RBP9.13□□□□□ -0.95
CTDNEP1-202ENST00000570380 SHISA2Q6UWI4 295 aa9.13□□□□□ -0.95
CTDNEP1-202ENST00000570380 ZNF662Q6ZS27 426 aa9.13□□□□□ -0.95
CTDNEP1-202ENST00000570380 SAMD14Q8IZD0 417 aaPredicted RBP9.13□□□□□ -0.95
CTDNEP1-202ENST00000570380 LRRC17Q8N6Y2 441 aa9.13□□□□□ -0.95
CTDNEP1-202ENST00000570380 OR4C3Q8NH37 302 aa9.13□□□□□ -0.95
CTDNEP1-202ENST00000570380 SH3YL1Q96HL8 342 aaPredicted RBP9.13□□□□□ -0.95
CTDNEP1-202ENST00000570380 PBKQ96KB5 322 aa9.13□□□□□ -0.95
CTDNEP1-202ENST00000570380 VRK1Q99986 396 aaPredicted RBP9.13□□□□□ -0.95
CTDNEP1-202ENST00000570380 ANKZF1Q9H8Y5 726 aa9.13□□□□□ -0.95
CTDNEP1-202ENST00000570380 FKRPQ9H9S5 495 aa9.13□□□□□ -0.95
CTDNEP1-202ENST00000570380 SLC35C2Q9NQQ7 365 aa9.13□□□□□ -0.95
CTDNEP1-202ENST00000570380 ARMCX1Q9P291 453 aa9.13□□□□□ -0.95
CTDNEP1-202ENST00000570380 KLHL9Q9P2J3 617 aa9.13□□□□□ -0.95
CTDNEP1-202ENST00000570380 TXNDC16Q9P2K2 825 aa9.13□□□□□ -0.95
CTDNEP1-202ENST00000570380 C19orf53Q9UNZ5 99 aaPredicted RBP9.13□□□□□ -0.95
CTDNEP1-202ENST00000570380 TRAF6Q9Y4K3 522 aa9.13□□□□□ -0.95
CTDNEP1-202ENST00000570380 CIB4A0PJX0 185 aa9.12□□□□□ -0.95
CTDNEP1-202ENST00000570380 ATP6V1G2-DDX39BF2Z307 99 aa9.12□□□□□ -0.95
CTDNEP1-202ENST00000570380 UPK1AO00322 258 aa9.12□□□□□ -0.95
CTDNEP1-202ENST00000570380 OXSR1O95747 527 aaPredicted RBP9.12□□□□□ -0.95
CTDNEP1-202ENST00000570380 IGHV3-9P01782 118 aa9.12□□□□□ -0.95
CTDNEP1-202ENST00000570380 PCMT1P22061 227 aa9.12□□□□□ -0.95
CTDNEP1-202ENST00000570380 GABRA3P34903 492 aa9.12□□□□□ -0.95
CTDNEP1-202ENST00000570380 MPIP34949 423 aa9.12□□□□□ -0.95
CTDNEP1-202ENST00000570380 EIF1P41567 113 aaKnown RBP9.12□□□□□ -0.95
CTDNEP1-202ENST00000570380 RASGEF1BQ0VAM2 473 aa9.12□□□□□ -0.95
CTDNEP1-202ENST00000570380 FOXF1Q12946 379 aa9.12□□□□□ -0.95
CTDNEP1-202ENST00000570380 MLC1Q15049 377 aa9.12□□□□□ -0.95
CTDNEP1-202ENST00000570380 TMEM107Q6UX40 140 aa9.12□□□□□ -0.95
CTDNEP1-202ENST00000570380 USP43Q70EL4 1123 aa9.12□□□□□ -0.95
CTDNEP1-202ENST00000570380 ZNF100Q8IYN0 542 aa9.12□□□□□ -0.95
CTDNEP1-202ENST00000570380 CENPLQ8N0S6 344 aaPredicted RBP9.12□□□□□ -0.95
CTDNEP1-202ENST00000570380 WDR31Q8NA23 367 aa9.12□□□□□ -0.95
CTDNEP1-202ENST00000570380 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.12□□□□□ -0.956e-11■■■■■ 32.3
CTDNEP1-202ENST00000570380 ZFP90Q8TF47 636 aa9.12□□□□□ -0.95
CTDNEP1-202ENST00000570380 PIK3R3Q92569 461 aa9.12□□□□□ -0.95
CTDNEP1-202ENST00000570380 NSUN5Q96P11 429 aaKnown RBP9.12□□□□□ -0.95
CTDNEP1-202ENST00000570380 LMF2Q9BU23 707 aaKnown RBP9.12□□□□□ -0.95
CTDNEP1-202ENST00000570380 ELOVL6Q9H5J4 265 aa9.12□□□□□ -0.95
CTDNEP1-202ENST00000570380 GIMAP4Q9NUV9 329 aa9.12□□□□□ -0.95
CTDNEP1-202ENST00000570380 RNF14Q9UBS8 474 aa9.12□□□□□ -0.95
CTDNEP1-202ENST00000570380 DMGDHQ9UI17 866 aaKnown RBP9.12□□□□□ -0.95
CTDNEP1-202ENST00000570380 TNPO3Q9Y5L0 923 aaKnown RBP9.12□□□□□ -0.95
CTDNEP1-202ENST00000570380 NBEAL2Q6ZNJ1 2754 aa9.12□□□□□ -0.95
CTDNEP1-202ENST00000570380 A0A1W2PNR3 127 aa9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 CCT8L1PA6NM43 557 aa9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 GJE1A6NN92 205 aa9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 ZNF724A8MTY0 619 aa9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 MYO1GB0I1T2 1018 aa9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 ZNF195O14628 629 aa9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 CYTIPO60759 359 aa9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 JUNP05412 331 aaKnown RBP9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 NGFRP08138 427 aa9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 ELK4P28324 431 aa9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 SPRP35270 261 aaPredicted RBP9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 LIMS1P48059 325 aa9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 PRIM2P49643 509 aa9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 FOXG1P55316 489 aaPredicted RBP9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 RAC3P60763 192 aa9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 SNRPD2P62316 118 aaKnown RBP9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 RAE1P78406 368 aaKnown RBP9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 SLC29A2Q14542 456 aa9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 TRADDQ15628 312 aa9.11□□□□□ -0.95
CTDNEP1-202ENST00000570380 TRIP10Q15642 601 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms