RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 EEFSECP57772 596 aaKnown RBP12.48□□□□□ -0.41
HERPUD1-218ENST00000569569 ZNF117Q03924 483 aa12.48□□□□□ -0.41
HERPUD1-218ENST00000569569 TMEM44Q2T9K0 475 aa12.48□□□□□ -0.41
HERPUD1-218ENST00000569569 SLC25A35Q3KQZ1 300 aa12.48□□□□□ -0.41
HERPUD1-218ENST00000569569 PDZK1Q5T2W1 519 aa12.48□□□□□ -0.41
HERPUD1-218ENST00000569569 TYW3Q6IPR3 259 aaKnown RBP12.48□□□□□ -0.41
HERPUD1-218ENST00000569569 BLOC1S3Q6QNY0 202 aa12.48□□□□□ -0.41
HERPUD1-218ENST00000569569 CHMP1BQ7LBR1 199 aa12.48□□□□□ -0.41
HERPUD1-218ENST00000569569 LIX1LQ8IVB5 337 aa12.48□□□□□ -0.41
HERPUD1-218ENST00000569569 FUNDC1Q8IVP5 155 aa12.48□□□□□ -0.41
HERPUD1-218ENST00000569569 MEIOBQ8N635 442 aa12.48□□□□□ -0.41
HERPUD1-218ENST00000569569 OIT3Q8WWZ8 545 aa12.48□□□□□ -0.41
HERPUD1-218ENST00000569569 THOC1Q96FV9 657 aaKnown RBP12.48□□□□□ -0.41
HERPUD1-218ENST00000569569 SAP130Q9H0E3 1048 aa12.48□□□□□ -0.41
HERPUD1-218ENST00000569569 RUBCNLQ9H714 662 aa12.48□□□□□ -0.41
HERPUD1-218ENST00000569569 MED4Q9NPJ6 270 aa12.48□□□□□ -0.41
HERPUD1-218ENST00000569569 MED17Q9NVC6 651 aa12.48□□□□□ -0.41
HERPUD1-218ENST00000569569 TMEM45AQ9NWC5 275 aa12.48□□□□□ -0.41
HERPUD1-218ENST00000569569 CCDC167Q9P0B6 97 aa12.48□□□□□ -0.41
HERPUD1-218ENST00000569569 ZNF629Q9UEG4 869 aaPredicted RBP12.48□□□□□ -0.41
HERPUD1-218ENST00000569569 LIPT1Q9Y234 373 aa12.48□□□□□ -0.41
HERPUD1-218ENST00000569569 AP4B1Q9Y6B7 739 aa12.48□□□□□ -0.41
HERPUD1-218ENST00000569569 C7orf72A4D263 438 aa12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 SERINC4A6NH21 518 aa12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 CLCA1A8K7I4 914 aa12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 DVL2O14641 736 aa12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 ZNF264O43296 627 aa12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 ATP8B1O43520 1251 aa12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 COX6B1P14854 86 aa12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 SUMO3P55854 103 aaPredicted RBP12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 HPCAP84074 193 aa12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 FUT5Q11128 374 aa12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 SQLEQ14534 574 aa12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 PLPPR5Q32ZL2 321 aa12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 GPAT3Q53EU6 434 aa12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 C6orf10Q5SRN2 563 aa12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 CBLN3Q6UW01 205 aa12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 DNAJC14Q6Y2X3 702 aaPredicted RBP12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 FRRS1Q6ZNA5 592 aa12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 OLIG3Q7RTU3 272 aa12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 UBQLNLQ8IYU4 475 aa12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 ZNF619Q8N2I2 560 aa12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 GTPBP8Q8N3Z3 284 aaPredicted RBP12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 NAXEQ8NCW5 288 aa12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 PNPT1Q8TCS8 783 aaKnown RBP12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 GTF2H4Q92759 462 aa12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 WNT2BQ93097 391 aa12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 MARVELD3Q96A59 401 aa12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 ZFP3Q96NJ6 502 aa12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 TRNT1Q96Q11 434 aaKnown RBP12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 TM9SF2Q99805 663 aa12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 RABEP2Q9H5N1 569 aa12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 TPT1P8Q9HAU6 139 aa12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 NPHS2Q9NP85 383 aa12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 SLC6A13Q9NSD5 602 aa12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 KCNE5Q9UJ90 142 aa12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 DCTN4Q9UJW0 460 aa12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 ICAM5Q9UMF0 924 aa12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 CARD8Q9Y2G2 431 aa12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 ITPR2Q14571 2701 aa12.47□□□□□ -0.41
HERPUD1-218ENST00000569569 ADGRG4Q8IZF6 3080 aa12.46□□□□□ -0.41
HERPUD1-218ENST00000569569 PRAMEF27A3QJZ7 478 aa12.46□□□□□ -0.41
HERPUD1-218ENST00000569569 SHISA8B8ZZ34 492 aa12.46□□□□□ -0.41
HERPUD1-218ENST00000569569 KIAA0513O60268 411 aa12.46□□□□□ -0.41
HERPUD1-218ENST00000569569 TNFRSF21O75509 655 aa12.46□□□□□ -0.41
HERPUD1-218ENST00000569569 RCBTB2O95199 551 aa12.46□□□□□ -0.41
HERPUD1-218ENST00000569569 H6PDO95479 791 aa12.46□□□□□ -0.41
HERPUD1-218ENST00000569569 NUDT14O95848 222 aa12.46□□□□□ -0.41
HERPUD1-218ENST00000569569 LINGO3P0C6S8 592 aa12.46□□□□□ -0.41
HERPUD1-218ENST00000569569 UBL4AP11441 157 aa12.46□□□□□ -0.41
HERPUD1-218ENST00000569569 NCF2P19878 526 aaPredicted RBP12.46□□□□□ -0.41
HERPUD1-218ENST00000569569 CTSSP25774 331 aa12.46□□□□□ -0.41
HERPUD1-218ENST00000569569 EIF1P41567 113 aaKnown RBP12.46□□□□□ -0.41
HERPUD1-218ENST00000569569 RNF144AP50876 292 aaPredicted RBP12.46□□□□□ -0.41
HERPUD1-218ENST00000569569 ZNF136P52737 540 aa12.46□□□□□ -0.41
HERPUD1-218ENST00000569569 SUCLG1P53597 346 aaKnown RBP12.46□□□□□ -0.41
HERPUD1-218ENST00000569569 CLDN15P56746 228 aa12.46□□□□□ -0.41
HERPUD1-218ENST00000569569 RPS3AP61247 264 aaKnown RBP12.46□□□□□ -0.41
HERPUD1-218ENST00000569569 TFF3Q07654 80 aa12.46□□□□□ -0.41
HERPUD1-218ENST00000569569 SYPL1Q16563 259 aa12.46□□□□□ -0.41
HERPUD1-218ENST00000569569 AGKQ53H12 422 aa12.46□□□□□ -0.41
HERPUD1-218ENST00000569569 COX20Q5RI15 118 aa12.46□□□□□ -0.41
HERPUD1-218ENST00000569569 LRRC74BQ6ZQY2 392 aa12.46□□□□□ -0.41
HERPUD1-218ENST00000569569 GRAMD2AQ8IUY3 354 aa12.46□□□□□ -0.41
HERPUD1-218ENST00000569569 C9orf106Q8NAJ2 232 aa12.46□□□□□ -0.41
HERPUD1-218ENST00000569569 TOR1AIP2Q8NFQ8 470 aa12.46□□□□□ -0.41
HERPUD1-218ENST00000569569 RFWD2Q8NHY2 731 aa12.46□□□□□ -0.41
HERPUD1-218ENST00000569569 GPR119Q8TDV5 335 aa12.46□□□□□ -0.41
HERPUD1-218ENST00000569569 SPDL1Q96EA4 605 aa12.46□□□□□ -0.41
HERPUD1-218ENST00000569569 SPOCK3Q9BQ16 436 aa12.46□□□□□ -0.41
HERPUD1-218ENST00000569569 LAT2Q9GZY6 243 aa12.46□□□□□ -0.41
HERPUD1-218ENST00000569569 ENKD1Q9H0I2 346 aa12.46□□□□□ -0.41
HERPUD1-218ENST00000569569 CLCF1Q9UBD9 225 aa12.46□□□□□ -0.41
HERPUD1-218ENST00000569569 TRIM33Q9UPN9 1127 aa12.46□□□□□ -0.41
HERPUD1-218ENST00000569569 PCDHB14Q9Y5E9 798 aa12.46□□□□□ -0.41
HERPUD1-218ENST00000569569 A0A096LPI6 279 aa12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 A0A0G2JND7 137 aa12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 SEC14L5O43304 696 aa12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 OIP5O43482 229 aa12.45□□□□□ -0.42
HERPUD1-218ENST00000569569 IL18BPO95998 194 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms