RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 MAPK14Q16539 360 aa19.57■□□□□ 0.72
NME3-210ENST00000567271 BCL2A1Q16548 175 aa19.57■□□□□ 0.72
NME3-210ENST00000567271 LRRC74BQ6ZQY2 392 aa19.57■□□□□ 0.72
NME3-210ENST00000567271 SEM1Q6ZVN7 128 aa19.57■□□□□ 0.72
NME3-210ENST00000567271 MSRB3Q8IXL7 192 aa19.57■□□□□ 0.72
NME3-210ENST00000567271 ZPLD1Q8TCW7 415 aa19.57■□□□□ 0.72
NME3-210ENST00000567271 ZG16BQ96DA0 208 aa19.57■□□□□ 0.72
NME3-210ENST00000567271 MED17Q9NVC6 651 aa19.57■□□□□ 0.72
NME3-210ENST00000567271 COQ3Q9NZJ6 369 aa19.57■□□□□ 0.72
NME3-210ENST00000567271 KLHL14Q9P2G3 628 aa19.57■□□□□ 0.72
NME3-210ENST00000567271 RNF6Q9Y252 685 aa19.57■□□□□ 0.72
NME3-210ENST00000567271 PHF3Q92576 2039 aaKnown RBP19.57■□□□□ 0.72
NME3-210ENST00000567271 ZNF264O43296 627 aa19.56■□□□□ 0.72
NME3-210ENST00000567271 EIF4E2O60573 245 aaKnown RBP19.56■□□□□ 0.72
NME3-210ENST00000567271 CHRM4P08173 479 aa19.56■□□□□ 0.72
NME3-210ENST00000567271 NR2F1P10589 423 aa19.56■□□□□ 0.72
NME3-210ENST00000567271 PEPDP12955 493 aa19.56■□□□□ 0.72
NME3-210ENST00000567271 ZNF708P17019 499 aa19.56■□□□□ 0.72
NME3-210ENST00000567271 P2RX1P51575 399 aa19.56■□□□□ 0.72
NME3-210ENST00000567271 ZNF41P51814 821 aaPredicted RBP19.56■□□□□ 0.72
NME3-210ENST00000567271 SRYQ05066 204 aa19.56■□□□□ 0.72
NME3-210ENST00000567271 RGNQ15493 299 aa19.56■□□□□ 0.72
NME3-210ENST00000567271 MAPK11Q15759 364 aa19.56■□□□□ 0.72
NME3-210ENST00000567271 NSUN5P2Q63ZY6 315 aa19.56■□□□□ 0.72
NME3-210ENST00000567271 TSPEARQ8WU66 669 aa19.56■□□□□ 0.72
NME3-210ENST00000567271 ZBTB8AQ96BR9 441 aa19.56■□□□□ 0.72
NME3-210ENST00000567271 SDCCAG3Q96C92 435 aa19.56■□□□□ 0.72
NME3-210ENST00000567271 SLC38A1Q9H2H9 487 aa19.56■□□□□ 0.72
NME3-210ENST00000567271 LEF1Q9UJU2 399 aaPredicted RBP19.56■□□□□ 0.72
NME3-210ENST00000567271 NDUFAF1Q9Y375 327 aa19.56■□□□□ 0.72
NME3-210ENST00000567271 TRBV5-3A0A0A0MS03 114 aa19.55■□□□□ 0.72
NME3-210ENST00000567271 C7orf72A4D263 438 aa19.55■□□□□ 0.72
NME3-210ENST00000567271 KDM4EB2RXH2 506 aaPredicted RBP19.55■□□□□ 0.72
NME3-210ENST00000567271 SHISA8B8ZZ34 492 aa19.55■□□□□ 0.72
NME3-210ENST00000567271 H0Y3Z8 333 aa19.55■□□□□ 0.72
NME3-210ENST00000567271 CLDN14O95500 239 aa19.55■□□□□ 0.72
NME3-210ENST00000567271 TFPTP0C1Z6 253 aa19.55■□□□□ 0.72
NME3-210ENST00000567271 LINGO3P0C6S8 592 aa19.55■□□□□ 0.72
NME3-210ENST00000567271 UBL4AP11441 157 aa19.55■□□□□ 0.72
NME3-210ENST00000567271 ZNF17P17021 662 aa19.55■□□□□ 0.72
NME3-210ENST00000567271 SUMO3P55854 103 aaPredicted RBP19.55■□□□□ 0.72
NME3-210ENST00000567271 DSTNP60981 165 aa19.55■□□□□ 0.72
NME3-210ENST00000567271 FGFBP1Q14512 234 aa19.55■□□□□ 0.72
NME3-210ENST00000567271 PLPPR5Q32ZL2 321 aa19.55■□□□□ 0.72
NME3-210ENST00000567271 NDUFAF6Q330K2 333 aa19.55■□□□□ 0.72
NME3-210ENST00000567271 LACC1Q8IV20 430 aa19.55■□□□□ 0.72
NME3-210ENST00000567271 GTPBP8Q8N3Z3 284 aaPredicted RBP19.55■□□□□ 0.72
NME3-210ENST00000567271 OR10Q1Q8NGQ4 319 aa19.55■□□□□ 0.72
NME3-210ENST00000567271 ASB5Q8WWX0 329 aa19.55■□□□□ 0.72
NME3-210ENST00000567271 PMM1Q92871 262 aa19.55■□□□□ 0.72
NME3-210ENST00000567271 TRIB1Q96RU8 372 aa19.55■□□□□ 0.72
NME3-210ENST00000567271 TUBA1CQ9BQE3 449 aa19.55■□□□□ 0.72
NME3-210ENST00000567271 RAD21L1Q9H4I0 556 aa19.55■□□□□ 0.72
NME3-210ENST00000567271 RUBCNLQ9H714 662 aa19.55■□□□□ 0.72
NME3-210ENST00000567271 MTHFD2LQ9H903 347 aaPredicted RBP19.55■□□□□ 0.72
NME3-210ENST00000567271 THUMPD1Q9NXG2 353 aaKnown RBP19.55■□□□□ 0.72
NME3-210ENST00000567271 VAPAQ9P0L0 249 aa19.55■□□□□ 0.72
NME3-210ENST00000567271 P2RX2Q9UBL9 471 aa19.55■□□□□ 0.72
NME3-210ENST00000567271 L3MBTL1Q9Y468 752 aa19.55■□□□□ 0.72
NME3-210ENST00000567271 KLF2Q9Y5W3 355 aaPredicted RBP19.55■□□□□ 0.72
NME3-210ENST00000567271 GMEB1Q9Y692 573 aa19.55■□□□□ 0.72
NME3-210ENST00000567271 A0A0G2JNJ9 132 aa19.54■□□□□ 0.72
NME3-210ENST00000567271 CD8B2A6NJW9 211 aa19.54■□□□□ 0.72
NME3-210ENST00000567271 FAM47E-STBD1D6RA91 191 aa19.54■□□□□ 0.72
NME3-210ENST00000567271 TOXO94900 526 aa19.54■□□□□ 0.72
NME3-210ENST00000567271 CSTAP01040 98 aa19.54■□□□□ 0.72
NME3-210ENST00000567271 SNRPB2P08579 225 aaKnown RBP19.54■□□□□ 0.72
NME3-210ENST00000567271 POU3F2P20265 443 aaPredicted RBP19.54■□□□□ 0.72
NME3-210ENST00000567271 CHRNB4P30926 498 aa19.54■□□□□ 0.72
NME3-210ENST00000567271 RIPPLY2Q5TAB7 128 aa19.54■□□□□ 0.72
NME3-210ENST00000567271 DLEU7Q6UYE1 221 aa19.54■□□□□ 0.72
NME3-210ENST00000567271 EIF3MQ7L2H7 374 aaKnown RBP19.54■□□□□ 0.72
NME3-210ENST00000567271 ADGRE4PQ86SQ3 457 aa19.54■□□□□ 0.72
NME3-210ENST00000567271 CCDC71Q8IV32 467 aaPredicted RBP19.54■□□□□ 0.72
NME3-210ENST00000567271 DPP10Q8N608 796 aa19.54■□□□□ 0.72
NME3-210ENST00000567271 OR5W2Q8NH69 310 aa19.54■□□□□ 0.72
NME3-210ENST00000567271 POC1BQ8TC44 478 aa19.54■□□□□ 0.72
NME3-210ENST00000567271 GPR119Q8TDV5 335 aa19.54■□□□□ 0.72
NME3-210ENST00000567271 SLC38A5Q8WUX1 472 aa19.54■□□□□ 0.72
NME3-210ENST00000567271 ARSGQ96EG1 525 aa19.54■□□□□ 0.72
NME3-210ENST00000567271 NPAS1Q99742 590 aa19.54■□□□□ 0.72
NME3-210ENST00000567271 LAT2Q9GZY6 243 aa19.54■□□□□ 0.72
NME3-210ENST00000567271 QRSL1Q9H0R6 528 aaKnown RBP19.54■□□□□ 0.72
NME3-210ENST00000567271 CALHM2Q9HA72 323 aa19.54■□□□□ 0.72
NME3-210ENST00000567271 SAR1AQ9NR31 198 aa19.54■□□□□ 0.72
NME3-210ENST00000567271 MRGBPQ9NV56 204 aa19.54■□□□□ 0.72
NME3-210ENST00000567271 Q9UFV3 132 aa19.54■□□□□ 0.72
NME3-210ENST00000567271 AP4B1Q9Y6B7 739 aa19.54■□□□□ 0.72
NME3-210ENST00000567271 AGAP5A6NIR3 686 aa19.53■□□□□ 0.72
NME3-210ENST00000567271 H3BML4 177 aa19.53■□□□□ 0.72
NME3-210ENST00000567271 ANGPT2O15123 496 aa19.53■□□□□ 0.72
NME3-210ENST00000567271 BMP2P12643 396 aa19.53■□□□□ 0.72
NME3-210ENST00000567271 PSMA4P25789 261 aaKnown RBP19.53■□□□□ 0.72
NME3-210ENST00000567271 TIMP3P35625 211 aa19.53■□□□□ 0.72
NME3-210ENST00000567271 PGM1P36871 562 aa19.53■□□□□ 0.72
NME3-210ENST00000567271 CLDN15P56746 228 aa19.53■□□□□ 0.72
NME3-210ENST00000567271 FADDQ13158 208 aa19.53■□□□□ 0.72
NME3-210ENST00000567271 SKP2Q13309 424 aa19.53■□□□□ 0.72
NME3-210ENST00000567271 HMGN2P46Q86SG4 172 aa19.53■□□□□ 0.72
NME3-210ENST00000567271 RETREG3Q86VR2 466 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms