RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 BRIX1Q8TDN6 353 aaKnown RBP14.6□□□□□ -0.07
COMMD4-215ENST00000566843 KISS1RQ969F8 398 aaPredicted RBP14.6□□□□□ -0.07
COMMD4-215ENST00000566843 TMEM106CQ9BVX2 250 aa14.6□□□□□ -0.07
COMMD4-215ENST00000566843 SHARPINQ9H0F6 387 aa14.6□□□□□ -0.07
COMMD4-215ENST00000566843 OR52A5Q9H2C5 316 aa14.6□□□□□ -0.07
COMMD4-215ENST00000566843 METTL17Q9H7H0 456 aaPredicted RBP14.6□□□□□ -0.07
COMMD4-215ENST00000566843 NLGN3Q9NZ94 848 aa14.6□□□□□ -0.07
COMMD4-215ENST00000566843 RPS6KB2Q9UBS0 482 aa14.6□□□□□ -0.07
COMMD4-215ENST00000566843 TAC3Q9UHF0 121 aa14.6□□□□□ -0.07
COMMD4-215ENST00000566843 TRAV1-2A0A0B4J238 106 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 FEZF1A0PJY2 475 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 MAN2B1O00754 1011 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 PIP5K1CO60331 668 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 POP7O75817 140 aaKnown RBP14.59□□□□□ -0.07
COMMD4-215ENST00000566843 SNAPC5O75971 98 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 OR5F1O95221 314 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 ZGLP1P0C6A0 271 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 RAB3BP20337 219 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 AHRP35869 848 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 CCR8P51685 355 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 SNTB2Q13425 540 aaKnown RBP14.59□□□□□ -0.07
COMMD4-215ENST00000566843 NDUFAF5Q5TEU4 345 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 OR4C11Q6IEV9 310 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 ARSKQ6UWY0 536 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 ZNF527Q8NB42 609 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 OR56A1Q8NGH5 318 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 OR2L2Q8NH16 312 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 ZFPM2Q8WW38 1151 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 MYLIPQ8WY64 445 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 MOAP1Q96BY2 351 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 PGLYRP3Q96LB9 341 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 SLC7A5P2Q9GIP4 190 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 SPRTNQ9H040 489 aaPredicted RBP14.59□□□□□ -0.07
COMMD4-215ENST00000566843 C20orf85Q9H1P6 137 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 CDCP1Q9H5V8 836 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 NPDC1Q9NQX5 325 aaPredicted RBP14.59□□□□□ -0.07
COMMD4-215ENST00000566843 NANSQ9NR45 359 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 IL36AQ9UHA7 158 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 ATP6V1G2-DDX39BF2Z307 99 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 NRG2O14511 850 aaPredicted RBP14.59□□□□□ -0.07
COMMD4-215ENST00000566843 TSPAN4O14817 238 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 PRKAR1BP31321 381 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 GCGRP47871 477 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 ARHGAP19Q14CB8 494 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 C1orf53Q5VUE5 145 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 CHMP1BQ7LBR1 199 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 OVCH2Q7RTZ1 564 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 SLC44A3Q8N4M1 653 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 OR5AR1Q8NGP9 310 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 CXorf40AQ8TE69 158 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 SMIM4Q8WVI0 70 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 THAP4Q8WY91 577 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 ZG16BQ96DA0 208 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 C16orf58Q96GQ5 468 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 SLC41A3Q96GZ6 507 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 MRGPRX3Q96LB0 322 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 LINC00052Q96N35 136 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 OR7D2Q96RA2 312 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 BBS4Q96RK4 519 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 NDC1Q9BTX1 674 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 MFRPQ9BY79 579 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 SDHAF2Q9NX18 166 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 TBX21Q9UL17 535 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 ZMIZ1Q9ULJ6 1067 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 ASF1AQ9Y294 204 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 NTNG1Q9Y2I2 539 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 SCN5AQ14524 2016 aa14.59□□□□□ -0.07
COMMD4-215ENST00000566843 PLSCR5A0PG75 271 aa14.58□□□□□ -0.08
COMMD4-215ENST00000566843 ZC3H12DA2A288 527 aaKnown RBP14.58□□□□□ -0.08
COMMD4-215ENST00000566843 OR6C65A6NJZ3 312 aa14.58□□□□□ -0.08
COMMD4-215ENST00000566843 CDC42EP2O14613 210 aa14.58□□□□□ -0.08
COMMD4-215ENST00000566843 PGRMC2O15173 223 aa14.58□□□□□ -0.08
COMMD4-215ENST00000566843 ITGA10O75578 1167 aa14.58□□□□□ -0.08
COMMD4-215ENST00000566843 CLTBP09497 229 aa14.58□□□□□ -0.08
COMMD4-215ENST00000566843 ITGB8P26012 769 aa14.58□□□□□ -0.08
COMMD4-215ENST00000566843 GRIN2CQ14957 1233 aa14.58□□□□□ -0.08
COMMD4-215ENST00000566843 ACSM3Q53FZ2 586 aa14.58□□□□□ -0.08
COMMD4-215ENST00000566843 RNASE12Q5GAN4 147 aaKnown RBP14.58□□□□□ -0.08
COMMD4-215ENST00000566843 FAM69AQ5T7M9 428 aa14.58□□□□□ -0.08
COMMD4-215ENST00000566843 TMEM215Q68D42 235 aa14.58□□□□□ -0.08
COMMD4-215ENST00000566843 RGS7BPQ6MZT1 257 aaPredicted RBP14.58□□□□□ -0.08
COMMD4-215ENST00000566843 DCUN1D3Q8IWE4 304 aa14.58□□□□□ -0.08
COMMD4-215ENST00000566843 ZBTB44Q8NCP5 570 aa14.58□□□□□ -0.08
COMMD4-215ENST00000566843 GANCQ8TET4 914 aa14.58□□□□□ -0.08
COMMD4-215ENST00000566843 SORCS1Q8WY21 1168 aa14.58□□□□□ -0.08
COMMD4-215ENST00000566843 DACT3Q96B18 629 aaPredicted RBP14.58□□□□□ -0.08
COMMD4-215ENST00000566843 ZNF514Q96K75 400 aaPredicted RBP14.58□□□□□ -0.08
COMMD4-215ENST00000566843 ZFP3Q96NJ6 502 aa14.58□□□□□ -0.08
COMMD4-215ENST00000566843 TBX5Q99593 518 aa14.58□□□□□ -0.08
COMMD4-215ENST00000566843 C1QTNF2Q9BXJ5 285 aa14.58□□□□□ -0.08
COMMD4-215ENST00000566843 PLEKHA1Q9HB21 404 aa14.58□□□□□ -0.08
COMMD4-215ENST00000566843 CALML5Q9NZT1 146 aa14.58□□□□□ -0.08
COMMD4-215ENST00000566843 HCN3Q9P1Z3 774 aa14.58□□□□□ -0.08
COMMD4-215ENST00000566843 IL20RAQ9UHF4 553 aa14.58□□□□□ -0.08
COMMD4-215ENST00000566843 PPIEQ9UNP9 301 aaKnown RBP14.58□□□□□ -0.08
COMMD4-215ENST00000566843 TOR1AO14656 332 aa14.58□□□□□ -0.08
COMMD4-215ENST00000566843 ASGR2P07307 311 aa14.58□□□□□ -0.08
COMMD4-215ENST00000566843 ATF1P18846 271 aa14.58□□□□□ -0.08
COMMD4-215ENST00000566843 TSPAN5P62079 268 aa14.58□□□□□ -0.08
COMMD4-215ENST00000566843 SLC3A1Q07837 685 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms