RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 OR2C1O95371 312 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 ALPIP09923 528 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 S100A11P31949 105 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 APLNRP35414 380 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 GALNT2Q10471 571 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 ECM1Q16610 540 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 ARSIQ5FYB1 569 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 APOBEC3HQ6NTF7 200 aaKnown RBP4.81□□□□□ -1.64
SMG1-211ENST00000565324 SLC7A5P1Q8MH63 180 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 OR6V1Q8N148 313 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 CLDN22Q8N7P3 220 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 SCARB1Q8WTV0 552 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 C1orf74Q96LT6 269 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 OR8D2Q9GZM6 311 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 MMP28Q9H239 520 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 LIN7BQ9HAP6 207 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 RANGRFQ9HD47 186 aaPredicted RBP4.81□□□□□ -1.64
SMG1-211ENST00000565324 POU2F3Q9UKI9 436 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 SLC35A3Q9Y2D2 325 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 RP1P56715 2156 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 ASGR2P07307 311 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 MGST1P10620 155 aaKnown RBP4.81□□□□□ -1.64
SMG1-211ENST00000565324 CNR2P34972 360 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 PPP1R8Q12972 351 aaKnown RBP4.81□□□□□ -1.64
SMG1-211ENST00000565324 ACSM3Q53FZ2 586 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 ZNF776Q68DI1 518 aaPredicted RBP4.81□□□□□ -1.64
SMG1-211ENST00000565324 PLBD1Q6P4A8 553 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 ASPGQ86U10 573 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 PRSS58Q8IYP2 241 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 YIPF5Q969M3 257 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 MYADMQ96S97 322 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 OR51B5Q9H339 312 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 DPEP3Q9H4B8 488 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 KLHL42Q9P2K6 505 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 YARS2Q9Y2Z4 477 aaKnown RBP4.81□□□□□ -1.64
SMG1-211ENST00000565324 ZNF536O15090 1300 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 LRIT2A6NDA9 550 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 CAPNS1P04632 268 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 FABP1P07148 127 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 DPEP1P16444 411 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 PPP1R3AQ16821 1122 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 CATSPEREQ5SY80 951 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 INTS5Q6P9B9 1019 aaKnown RBP4.81□□□□□ -1.64
SMG1-211ENST00000565324 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.81□□□□□ -1.64
SMG1-211ENST00000565324 EMID1Q96A84 441 aaPredicted RBP4.81□□□□□ -1.64
SMG1-211ENST00000565324 PRRC1Q96M27 445 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 SLC2A13Q96QE2 648 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 CHRDL1Q9BU40 450 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 SLC39A9Q9NUM3 307 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 NPFFR2Q9Y5X5 522 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 C1orf167Q5SNV9 1468 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 MYBPHLA2RUH7 354 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 B4GALT5O43286 388 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 UBL3O95164 117 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 ACP5P13686 325 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 PRDX3P30048 256 aaKnown RBP4.81□□□□□ -1.64
SMG1-211ENST00000565324 MLLT10P55197 1068 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 RAB1AP62820 205 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 CATR1Q13166 79 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 RBM39Q14498 530 aaKnown RBP4.81□□□□□ -1.64
SMG1-211ENST00000565324 LAPTM4AQ15012 233 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 MS4A13Q5J8X5 152 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.81□□□□□ -1.64
SMG1-211ENST00000565324 C15orf52Q6ZUT6 534 aaKnown RBP4.81□□□□□ -1.64
SMG1-211ENST00000565324 PIM3Q86V86 326 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 C4orf32Q8N8J7 132 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 ARL14EPQ8N8R7 260 aaPredicted RBP4.81□□□□□ -1.64
SMG1-211ENST00000565324 NPLOC4Q8TAT6 608 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 SDSLQ96GA7 329 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 RANBP9Q96S59 729 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 SPHK1Q9NYA1 384 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 CACFD1Q9UGQ2 172 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 KDELR3O43731 214 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 ARL2P36404 184 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 CLDN6P56747 220 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 BTG1P62324 171 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 PAGE3Q5JUK9 113 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 CNTN4Q8IWV2 1026 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 HMGB4Q8WW32 186 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 RAB3CQ96E17 227 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 STRADBQ9C0K7 418 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 GORASP2Q9H8Y8 452 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 C12orf10Q9HB07 376 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 A0A1W2PQ09 198 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 BLACEA4D250 179 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 ANKRD34BA5PLL1 514 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 ZNF587BE7ETH6 402 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 GABARAPH6UMI1 98 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 ADAM23O75077 832 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 GABARAPO95166 117 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 ITGB2P05107 769 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 ADRB1P08588 477 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 ANXA7P20073 488 aaKnown RBP4.81□□□□□ -1.64
SMG1-211ENST00000565324 ITGB8P26012 769 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 PLCXD2Q0VAA5 305 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 CES4AQ5XG92 561 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 H3F3CQ6NXT2 135 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 OR4N5Q8IXE1 308 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 KDM8Q8N371 416 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 CLSTN3Q9BQT9 956 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms