RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 CLIC1O00299 241 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 ZNF264O43296 627 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 EEF1E1O43324 174 aaKnown RBP9.15□□□□□ -0.94
HERC1-212ENST00000561348 UGT2B17O75795 530 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 EPPINO95925 133 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 BCHEP06276 602 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 NGFRP08138 427 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 HOXD4P09016 255 aaPredicted RBP9.15□□□□□ -0.94
HERC1-212ENST00000561348 COX6B1P14854 86 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 CD1EP15812 388 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 CCNA2P20248 432 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 CAPN3P20807 821 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 CHMP24386 653 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 MSX1P28360 303 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 LCN1P31025 176 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 UQCRC1P31930 480 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 PTGER4P35408 488 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 MDH1P40925 334 aaKnown RBP9.15□□□□□ -0.94
HERC1-212ENST00000561348 EIF1AXP47813 144 aaKnown RBP9.15□□□□□ -0.94
HERC1-212ENST00000561348 LHX2P50458 406 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 GFRA1P56159 465 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 CLDN20P56880 219 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 B3GALT5-AS1P59052 145 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 DSTNP60981 165 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 ART3Q13508 389 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 SNTB1Q13884 538 aaKnown RBP9.15□□□□□ -0.94
HERC1-212ENST00000561348 KLHL26Q53HC5 615 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 EXOSC6Q5RKV6 272 aaKnown RBP9.15□□□□□ -0.94
HERC1-212ENST00000561348 TYW3Q6IPR3 259 aaKnown RBP9.15□□□□□ -0.94
HERC1-212ENST00000561348 BLOC1S3Q6QNY0 202 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 EIF3MQ7L2H7 374 aaKnown RBP9.15□□□□□ -0.94
HERC1-212ENST00000561348 LACC1Q8IV20 430 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 FUNDC1Q8IVP5 155 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 ZNF619Q8N2I2 560 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 CHDHQ8NE62 594 aaPredicted RBP9.15□□□□□ -0.94
HERC1-212ENST00000561348 TOR1AIP2Q8NFQ8 470 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 GOT1L1Q8NHS2 421 aaPredicted RBP9.15□□□□□ -0.94
HERC1-212ENST00000561348 FBXO27Q8NI29 283 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 ZNF563Q8TA94 476 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 ZFP90Q8TF47 636 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 RNF138Q8WVD3 245 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 GTF2H4Q92759 462 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 INTS12Q96CB8 462 aaKnown RBP9.15□□□□□ -0.94
HERC1-212ENST00000561348 NTNG2Q96CW9 530 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 ZG16BQ96DA0 208 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 DNAJA3Q96EY1 480 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 NPAS1Q99742 590 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 THUMPD3Q9BV44 507 aaKnown RBP9.15□□□□□ -0.94
HERC1-212ENST00000561348 PINK1Q9BXM7 581 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 PRDM14Q9GZV8 571 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 SLAMF8Q9P0V8 285 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 STOML1Q9UBI4 398 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 P2RX2Q9UBL9 471 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 PCDHB14Q9Y5E9 798 aa9.15□□□□□ -0.94
HERC1-212ENST00000561348 PHF3Q92576 2039 aaKnown RBP9.15□□□□□ -0.94
HERC1-212ENST00000561348 KIAA1549Q9HCM3 1950 aa9.14□□□□□ -0.95
HERC1-212ENST00000561348 A0A1W2PQD3 144 aa9.14□□□□□ -0.95
HERC1-212ENST00000561348 SLC22A20A6NK97 555 aa9.14□□□□□ -0.95
HERC1-212ENST00000561348 CLDN24A6NM45 220 aa9.14□□□□□ -0.95
HERC1-212ENST00000561348 HSPB2A8KAH6 182 aa9.14□□□□□ -0.95
HERC1-212ENST00000561348 SMNDC1O75940 238 aaKnown RBP eCLIP9.14□□□□□ -0.95
HERC1-212ENST00000561348 CHRM4P08173 479 aa9.14□□□□□ -0.95
HERC1-212ENST00000561348 CPN1P15169 458 aa9.14□□□□□ -0.95
HERC1-212ENST00000561348 IL7RP16871 459 aa9.14□□□□□ -0.95
HERC1-212ENST00000561348 P2RX1P51575 399 aa9.14□□□□□ -0.95
HERC1-212ENST00000561348 SUCLG1P53597 346 aaKnown RBP9.14□□□□□ -0.95
HERC1-212ENST00000561348 CLDN15P56746 228 aa9.14□□□□□ -0.95
HERC1-212ENST00000561348 CLDN18P56856 261 aa9.14□□□□□ -0.95
HERC1-212ENST00000561348 EEFSECP57772 596 aaKnown RBP9.14□□□□□ -0.95
HERC1-212ENST00000561348 RPS3AP61247 264 aaKnown RBP9.14□□□□□ -0.95
HERC1-212ENST00000561348 SIRPAP78324 504 aa9.14□□□□□ -0.95
HERC1-212ENST00000561348 FUT5Q11128 374 aa9.14□□□□□ -0.95
HERC1-212ENST00000561348 FOXF1Q12946 379 aa9.14□□□□□ -0.95
HERC1-212ENST00000561348 CBFBQ13951 182 aa9.14□□□□□ -0.95
HERC1-212ENST00000561348 TOMM34Q15785 309 aaPredicted RBP9.14□□□□□ -0.95
HERC1-212ENST00000561348 HSPB2Q16082 182 aa9.14□□□□□ -0.95
HERC1-212ENST00000561348 MAPK14Q16539 360 aa9.14□□□□□ -0.95
HERC1-212ENST00000561348 PLPPR5Q32ZL2 321 aa9.14□□□□□ -0.95
HERC1-212ENST00000561348 MMEL1Q495T6 779 aa9.14□□□□□ -0.95
HERC1-212ENST00000561348 NHSL2Q5HYW2 709 aa9.14□□□□□ -0.95
HERC1-212ENST00000561348 RPS26P11Q5JNZ5 115 aaPredicted RBP9.14□□□□□ -0.95
HERC1-212ENST00000561348 PAGE3Q5JUK9 113 aa9.14□□□□□ -0.95
HERC1-212ENST00000561348 MEX3BQ6ZN04 569 aaKnown RBP9.14□□□□□ -0.95
HERC1-212ENST00000561348 FRRS1Q6ZNA5 592 aa9.14□□□□□ -0.95
HERC1-212ENST00000561348 MSANTD1Q6ZTZ1 278 aa9.14□□□□□ -0.95
HERC1-212ENST00000561348 MTERF4Q7Z6M4 381 aaKnown RBP9.14□□□□□ -0.95
HERC1-212ENST00000561348 LIX1LQ8IVB5 337 aa9.14□□□□□ -0.95
HERC1-212ENST00000561348 CNEP1R1Q8N9A8 125 aa9.14□□□□□ -0.95
HERC1-212ENST00000561348 C9orf106Q8NAJ2 232 aa9.14□□□□□ -0.95
HERC1-212ENST00000561348 MIPOL1Q8TD10 442 aa9.14□□□□□ -0.95
HERC1-212ENST00000561348 MAL2Q969L2 176 aa9.14□□□□□ -0.95
HERC1-212ENST00000561348 ZNF845Q96IR2 970 aaPredicted RBP9.14□□□□□ -0.95
HERC1-212ENST00000561348 TRIM8Q9BZR9 551 aa9.14□□□□□ -0.95
HERC1-212ENST00000561348 ZNF350Q9GZX5 532 aa9.14□□□□□ -0.95
HERC1-212ENST00000561348 PAIP1Q9H074 479 aaKnown RBP9.14□□□□□ -0.95
HERC1-212ENST00000561348 HHATLQ9HCP6 504 aa9.14□□□□□ -0.95
HERC1-212ENST00000561348 CHST11Q9NPF2 352 aa9.14□□□□□ -0.95
HERC1-212ENST00000561348 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.14□□□□□ -0.95
HERC1-212ENST00000561348 KCNE5Q9UJ90 142 aa9.14□□□□□ -0.95
HERC1-212ENST00000561348 LIPT1Q9Y234 373 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms