RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 OIP5O43482 229 aa16.53■□□□□ 0.24
CLPX-203ENST00000558958 TPST2O60704 377 aa16.53■□□□□ 0.24
CLPX-203ENST00000558958 SEMA7AO75326 666 aa16.53■□□□□ 0.24
CLPX-203ENST00000558958 F10P00742 488 aa16.53■□□□□ 0.24
CLPX-203ENST00000558958 GKN3PP0CG01 181 aa16.53■□□□□ 0.24
CLPX-203ENST00000558958 ITGA2P17301 1181 aa16.53■□□□□ 0.24
CLPX-203ENST00000558958 SKP2Q13309 424 aa16.53■□□□□ 0.24
CLPX-203ENST00000558958 ZNF300Q96RE9 604 aaPredicted RBP16.53■□□□□ 0.24
CLPX-203ENST00000558958 OSBPL11Q9BXB4 747 aa16.53■□□□□ 0.24
CLPX-203ENST00000558958 ANGPTL4Q9BY76 406 aa16.53■□□□□ 0.24
CLPX-203ENST00000558958 LAT2Q9GZY6 243 aa16.53■□□□□ 0.24
CLPX-203ENST00000558958 RNF32Q9H0A6 362 aa16.53■□□□□ 0.24
CLPX-203ENST00000558958 PLA2G3Q9NZ20 509 aa16.53■□□□□ 0.24
CLPX-203ENST00000558958 LRFN1Q9P244 771 aa16.53■□□□□ 0.24
CLPX-203ENST00000558958 CARD8Q9Y2G2 431 aa16.53■□□□□ 0.24
CLPX-203ENST00000558958 ANKRD11Q6UB99 2663 aaPredicted RBP16.53■□□□□ 0.24
CLPX-203ENST00000558958 CHD8Q9HCK8 2581 aa16.53■□□□□ 0.24
CLPX-203ENST00000558958 ANKRD33BA6NCL7 494 aa16.52■□□□□ 0.23
CLPX-203ENST00000558958 EIF4E2O60573 245 aaKnown RBP16.52■□□□□ 0.23
CLPX-203ENST00000558958 ADAM11O75078 769 aa16.52■□□□□ 0.23
CLPX-203ENST00000558958 NEURL1O76050 574 aa16.52■□□□□ 0.23
CLPX-203ENST00000558958 FCGR1AP12314 374 aa16.52■□□□□ 0.23
CLPX-203ENST00000558958 PRG2P13727 222 aa16.52■□□□□ 0.23
CLPX-203ENST00000558958 ACAA2P42765 397 aaKnown RBP16.52■□□□□ 0.23
CLPX-203ENST00000558958 HOXC5Q00444 222 aa16.52■□□□□ 0.23
CLPX-203ENST00000558958 ZNF117Q03924 483 aa16.52■□□□□ 0.23
CLPX-203ENST00000558958 C17orf67Q0P5P2 114 aa16.52■□□□□ 0.23
CLPX-203ENST00000558958 SLC30A6Q6NXT4 461 aa16.52■□□□□ 0.23
CLPX-203ENST00000558958 CBLN3Q6UW01 205 aa16.52■□□□□ 0.23
CLPX-203ENST00000558958 IGFL2Q6UWQ7 119 aa16.52■□□□□ 0.23
CLPX-203ENST00000558958 DEF8Q6ZN54 512 aa16.52■□□□□ 0.23
CLPX-203ENST00000558958 ZNF550Q7Z398 422 aa16.52■□□□□ 0.23
CLPX-203ENST00000558958 ZNF440Q8IYI8 595 aa16.52■□□□□ 0.23
CLPX-203ENST00000558958 LILRA2Q8N149 483 aa16.52■□□□□ 0.23
CLPX-203ENST00000558958 DUSP19Q8WTR2 217 aa16.52■□□□□ 0.23
CLPX-203ENST00000558958 PHF10Q8WUB8 498 aaKnown RBP16.52■□□□□ 0.23
CLPX-203ENST00000558958 LRTOMTQ8WZ04 291 aa16.52■□□□□ 0.23
CLPX-203ENST00000558958 HAS2Q92819 552 aa16.52■□□□□ 0.23
CLPX-203ENST00000558958 FRMD6Q96NE9 622 aa16.52■□□□□ 0.23
CLPX-203ENST00000558958 RNPEPL1Q9HAU8 725 aa16.52■□□□□ 0.23
CLPX-203ENST00000558958 PROK2Q9HC23 129 aa16.52■□□□□ 0.23
CLPX-203ENST00000558958 AGPAT4Q9NRZ5 378 aa16.52■□□□□ 0.23
CLPX-203ENST00000558958 STX18Q9P2W9 335 aaKnown RBP16.52■□□□□ 0.23
CLPX-203ENST00000558958 WIF1Q9Y5W5 379 aa16.52■□□□□ 0.23
CLPX-203ENST00000558958 C2orf72A6NCS6 295 aa16.51■□□□□ 0.23
CLPX-203ENST00000558958 TMEM8BA6NDV4 472 aa16.51■□□□□ 0.23
CLPX-203ENST00000558958 C17orf51A8MQB3 221 aa16.51■□□□□ 0.23
CLPX-203ENST00000558958 HCRTR2O43614 444 aa16.51■□□□□ 0.23
CLPX-203ENST00000558958 FMO6PO60774 539 aa16.51■□□□□ 0.23
CLPX-203ENST00000558958 CYP7B1O75881 506 aa16.51■□□□□ 0.23
CLPX-203ENST00000558958 DIRAS1O95057 198 aa16.51■□□□□ 0.23
CLPX-203ENST00000558958 ATP6V1G2O95670 118 aa16.51■□□□□ 0.23
CLPX-203ENST00000558958 ANPEPP15144 967 aa16.51■□□□□ 0.23
CLPX-203ENST00000558958 RHCEP18577 417 aa16.51■□□□□ 0.23
CLPX-203ENST00000558958 FASP25445 335 aa16.51■□□□□ 0.23
CLPX-203ENST00000558958 YAP1P46937 504 aaKnown RBP16.51■□□□□ 0.23
CLPX-203ENST00000558958 OR1C1Q15619 314 aa16.51■□□□□ 0.23
CLPX-203ENST00000558958 ATP6AP1Q15904 470 aa16.51■□□□□ 0.23
CLPX-203ENST00000558958 PRAMEF20Q5VT98 475 aa16.51■□□□□ 0.23
CLPX-203ENST00000558958 SPINK14Q6IE38 97 aa16.51■□□□□ 0.23
CLPX-203ENST00000558958 RANBP3LQ86VV4 465 aaPredicted RBP16.51■□□□□ 0.23
CLPX-203ENST00000558958 PQLC1Q8N2U9 271 aa16.51■□□□□ 0.23
CLPX-203ENST00000558958 PSD4Q8NDX1 1056 aa16.51■□□□□ 0.23
CLPX-203ENST00000558958 SNRNP27Q8WVK2 155 aaKnown RBP16.51■□□□□ 0.23
CLPX-203ENST00000558958 SIGLEC12Q96PQ1 595 aa16.51■□□□□ 0.23
CLPX-203ENST00000558958 ZNF347Q96SE7 839 aa16.51■□□□□ 0.23
CLPX-203ENST00000558958 SMAD5Q99717 465 aaKnown RBP16.51■□□□□ 0.23
CLPX-203ENST00000558958 PKP2Q99959 881 aa16.51■□□□□ 0.23
CLPX-203ENST00000558958 PRR14Q9BWN1 585 aa16.51■□□□□ 0.23
CLPX-203ENST00000558958 TIMMDC1Q9NPL8 285 aa16.51■□□□□ 0.23
CLPX-203ENST00000558958 SDHAF3Q9NRP4 125 aa16.51■□□□□ 0.23
CLPX-203ENST00000558958 NKX1-2Q9UD57 310 aaPredicted RBP16.51■□□□□ 0.23
CLPX-203ENST00000558958 TESQ9UGI8 421 aaKnown RBP16.51■□□□□ 0.23
CLPX-203ENST00000558958 ICAM5Q9UMF0 924 aa16.51■□□□□ 0.23
CLPX-203ENST00000558958 CNTRLQ7Z7A1 2325 aa16.51■□□□□ 0.23
CLPX-203ENST00000558958 IGLV3-32A0A0A0MS00 114 aa16.5■□□□□ 0.23
CLPX-203ENST00000558958 OR5H15A6NDH6 313 aa16.5■□□□□ 0.23
CLPX-203ENST00000558958 J3KTA2 159 aa16.5■□□□□ 0.23
CLPX-203ENST00000558958 FFAR1O14842 300 aa16.5■□□□□ 0.23
CLPX-203ENST00000558958 CLOCKO15516 846 aa16.5■□□□□ 0.23
CLPX-203ENST00000558958 BAG2O95816 211 aa16.5■□□□□ 0.23
CLPX-203ENST00000558958 CST1P01037 141 aa16.5■□□□□ 0.23
CLPX-203ENST00000558958 P04436 131 aa16.5■□□□□ 0.23
CLPX-203ENST00000558958 EPS8Q12929 822 aa16.5■□□□□ 0.23
CLPX-203ENST00000558958 BORAQ6PGQ7 559 aa16.5■□□□□ 0.23
CLPX-203ENST00000558958 TSPYL5Q86VY4 417 aaPredicted RBP16.5■□□□□ 0.23
CLPX-203ENST00000558958 ARSGQ96EG1 525 aa16.5■□□□□ 0.23
CLPX-203ENST00000558958 SH3YL1Q96HL8 342 aaPredicted RBP16.5■□□□□ 0.23
CLPX-203ENST00000558958 MCHR1Q99705 422 aa16.5■□□□□ 0.23
CLPX-203ENST00000558958 PIP5K1AQ99755 562 aa16.5■□□□□ 0.23
CLPX-203ENST00000558958 SACM1LQ9NTJ5 587 aa16.5■□□□□ 0.23
CLPX-203ENST00000558958 DNAJB9Q9UBS3 223 aa16.5■□□□□ 0.23
CLPX-203ENST00000558958 ACAD8Q9UKU7 415 aa16.5■□□□□ 0.23
CLPX-203ENST00000558958 A4GNTQ9UNA3 340 aa16.5■□□□□ 0.23
CLPX-203ENST00000558958 FAM32AQ9Y421 112 aaKnown RBP16.5■□□□□ 0.23
CLPX-203ENST00000558958 MGAQ8IWI9 3026 aa16.49■□□□□ 0.23
CLPX-203ENST00000558958 AP3D1O14617 1153 aa16.49■□□□□ 0.23
CLPX-203ENST00000558958 DPM1O60762 260 aa16.49■□□□□ 0.23
CLPX-203ENST00000558958 DEAF1O75398 565 aaPredicted RBP16.49■□□□□ 0.23
CLPX-203ENST00000558958 SLC25A12O75746 678 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms