RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 TBXA2RP21731 343 aa10.84□□□□□ -0.67
TPM1-216ENST00000558910 CDKN2CP42773 168 aa10.84□□□□□ -0.67
TPM1-216ENST00000558910 CPA2P48052 419 aa10.84□□□□□ -0.67
TPM1-216ENST00000558910 ZNF41P51814 821 aaPredicted RBP10.84□□□□□ -0.67
TPM1-216ENST00000558910 CLNS1AP54105 237 aaKnown RBP10.84□□□□□ -0.67
TPM1-216ENST00000558910 DLX5P56178 289 aa10.84□□□□□ -0.67
TPM1-216ENST00000558910 CLDN18P56856 261 aa10.84□□□□□ -0.67
TPM1-216ENST00000558910 OCRLQ01968 901 aa10.84□□□□□ -0.67
TPM1-216ENST00000558910 TFF3Q07654 80 aa10.84□□□□□ -0.67
TPM1-216ENST00000558910 SGCBQ16585 318 aa10.84□□□□□ -0.67
TPM1-216ENST00000558910 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.84□□□□□ -0.67
TPM1-216ENST00000558910 PDZK1Q5T2W1 519 aa10.84□□□□□ -0.67
TPM1-216ENST00000558910 SAMD5Q5TGI4 173 aa10.84□□□□□ -0.67
TPM1-216ENST00000558910 ANXA8L1Q5VT79 327 aa10.84□□□□□ -0.67
TPM1-216ENST00000558910 ZCCHC12Q6PEW1 402 aa10.84□□□□□ -0.67
TPM1-216ENST00000558910 POMZP3Q6PJE2 187 aa10.84□□□□□ -0.67
TPM1-216ENST00000558910 HDXQ7Z353 690 aa10.84□□□□□ -0.67
TPM1-216ENST00000558910 SPATA19Q7Z5L4 167 aa10.84□□□□□ -0.67
TPM1-216ENST00000558910 TMEM200AQ86VY9 491 aa10.84□□□□□ -0.67
TPM1-216ENST00000558910 ZZZ3Q8IYH5 903 aa10.84□□□□□ -0.67
TPM1-216ENST00000558910 VPS37AQ8NEZ2 397 aa10.84□□□□□ -0.67
TPM1-216ENST00000558910 B4GALNT2Q8NHY0 566 aa10.84□□□□□ -0.67
TPM1-216ENST00000558910 FAM110BQ8TC76 370 aa10.84□□□□□ -0.67
TPM1-216ENST00000558910 RNF138Q8WVD3 245 aa10.84□□□□□ -0.67
TPM1-216ENST00000558910 FIG4Q92562 907 aa10.84□□□□□ -0.67
TPM1-216ENST00000558910 DTNBP1Q96EV8 351 aa10.84□□□□□ -0.67
TPM1-216ENST00000558910 DNAJA3Q96EY1 480 aa10.84□□□□□ -0.67
TPM1-216ENST00000558910 RNF145Q96MT1 663 aa10.84□□□□□ -0.67
TPM1-216ENST00000558910 OR52E6Q96RD3 313 aa10.84□□□□□ -0.67
TPM1-216ENST00000558910 PIGQQ9BRB3 760 aa10.84□□□□□ -0.67
TPM1-216ENST00000558910 SLC35A5Q9BS91 424 aa10.84□□□□□ -0.67
TPM1-216ENST00000558910 PRRG4Q9BZD6 226 aa10.84□□□□□ -0.67
TPM1-216ENST00000558910 TRIM8Q9BZR9 551 aa10.84□□□□□ -0.67
TPM1-216ENST00000558910 UBQLN4Q9NRR5 601 aa10.84□□□□□ -0.67
TPM1-216ENST00000558910 HAO1Q9UJM8 370 aa10.84□□□□□ -0.67
TPM1-216ENST00000558910 CLEC4AQ9UMR7 237 aa10.84□□□□□ -0.67
TPM1-216ENST00000558910 POLQO75417 2590 aa10.84□□□□□ -0.67
TPM1-216ENST00000558910 ANKRD17O75179 2603 aaKnown RBP10.84□□□□□ -0.67
TPM1-216ENST00000558910 CENPVL1A0A0U1RR11 272 aa10.83□□□□□ -0.68
TPM1-216ENST00000558910 ALG1L2C9J202 215 aa10.83□□□□□ -0.68
TPM1-216ENST00000558910 RNASET2O00584 256 aaKnown RBP10.83□□□□□ -0.68
TPM1-216ENST00000558910 ANKRD28O15084 1053 aa10.83□□□□□ -0.68
TPM1-216ENST00000558910 FCMRO60667 390 aa10.83□□□□□ -0.68
TPM1-216ENST00000558910 SNUPNO95149 360 aaKnown RBP10.83□□□□□ -0.68
TPM1-216ENST00000558910 KRT16P08779 473 aa10.83□□□□□ -0.68
TPM1-216ENST00000558910 CPN1P15169 458 aa10.83□□□□□ -0.68
TPM1-216ENST00000558910 ZNF708P17019 499 aa10.83□□□□□ -0.68
TPM1-216ENST00000558910 IL11P20809 199 aa10.83□□□□□ -0.68
TPM1-216ENST00000558910 UQCRC2P22695 453 aa10.83□□□□□ -0.68
TPM1-216ENST00000558910 CTSSP25774 331 aa10.83□□□□□ -0.68
TPM1-216ENST00000558910 CEACAM8P31997 349 aaPredicted RBP10.83□□□□□ -0.68
TPM1-216ENST00000558910 SFTPDP35247 375 aa10.83□□□□□ -0.68
TPM1-216ENST00000558910 CPOXP36551 454 aa10.83□□□□□ -0.68
TPM1-216ENST00000558910 EIF1AXP47813 144 aaKnown RBP10.83□□□□□ -0.68
TPM1-216ENST00000558910 ZNF117Q03924 483 aa10.83□□□□□ -0.68
TPM1-216ENST00000558910 SF3B4Q15427 424 aaKnown RBP eCLIP10.83□□□□□ -0.68
TPM1-216ENST00000558910 SMU1Q2TAY7 513 aa10.83□□□□□ -0.68
TPM1-216ENST00000558910 SLC25A35Q3KQZ1 300 aa10.83□□□□□ -0.68
TPM1-216ENST00000558910 GPAT3Q53EU6 434 aa10.83□□□□□ -0.68
TPM1-216ENST00000558910 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.83□□□□□ -0.68
TPM1-216ENST00000558910 BHLHB9Q6PI77 547 aa10.83□□□□□ -0.68
TPM1-216ENST00000558910 CBLN3Q6UW01 205 aa10.83□□□□□ -0.68
TPM1-216ENST00000558910 RNF130Q86XS8 419 aa10.83□□□□□ -0.68
TPM1-216ENST00000558910 KIRREL3Q8IZU9 778 aa10.83□□□□□ -0.68
TPM1-216ENST00000558910 NATD1Q8N6N6 113 aa10.83□□□□□ -0.68
TPM1-216ENST00000558910 OR9I1Q8NGQ6 314 aa10.83□□□□□ -0.68
TPM1-216ENST00000558910 ZPLD1Q8TCW7 415 aa10.83□□□□□ -0.68
TPM1-216ENST00000558910 MOAP1Q96BY2 351 aa10.83□□□□□ -0.68
TPM1-216ENST00000558910 PANX1Q96RD7 426 aa10.83□□□□□ -0.68
TPM1-216ENST00000558910 STACQ99469 402 aa10.83□□□□□ -0.68
TPM1-216ENST00000558910 ZNF559Q9BR84 538 aa10.83□□□□□ -0.68
TPM1-216ENST00000558910 CALHM2Q9HA72 323 aa10.83□□□□□ -0.68
TPM1-216ENST00000558910 DUSP22Q9NRW4 184 aa10.83□□□□□ -0.68
TPM1-216ENST00000558910 MED17Q9NVC6 651 aa10.83□□□□□ -0.68
TPM1-216ENST00000558910 GPR45Q9Y5Y3 372 aa10.83□□□□□ -0.68
TPM1-216ENST00000558910 USH1CQ9Y6N9 552 aa10.83□□□□□ -0.68
TPM1-216ENST00000558910 CCDC154A6NI56 674 aa10.82□□□□□ -0.68
TPM1-216ENST00000558910 CD8B2A6NJW9 211 aa10.82□□□□□ -0.68
TPM1-216ENST00000558910 SLC22A20A6NK97 555 aa10.82□□□□□ -0.68
TPM1-216ENST00000558910 H3BNH8 94 aa10.82□□□□□ -0.68
TPM1-216ENST00000558910 TNFSF11O14788 317 aa10.82□□□□□ -0.68
TPM1-216ENST00000558910 UBDO15205 165 aa10.82□□□□□ -0.68
TPM1-216ENST00000558910 SCN2BO60939 215 aa10.82□□□□□ -0.68
TPM1-216ENST00000558910 SLC22A3O75751 556 aa10.82□□□□□ -0.68
TPM1-216ENST00000558910 ANP32DO95626 131 aa10.82□□□□□ -0.68
TPM1-216ENST00000558910 IFI6P09912 130 aa10.82□□□□□ -0.68
TPM1-216ENST00000558910 ARAFP10398 606 aa10.82□□□□□ -0.68
TPM1-216ENST00000558910 CHMP24386 653 aa10.82□□□□□ -0.68
TPM1-216ENST00000558910 TIMP3P35625 211 aa10.82□□□□□ -0.68
TPM1-216ENST00000558910 CLDN15P56746 228 aa10.82□□□□□ -0.68
TPM1-216ENST00000558910 FOXF1Q12946 379 aa10.82□□□□□ -0.68
TPM1-216ENST00000558910 PON3Q15166 354 aa10.82□□□□□ -0.68
TPM1-216ENST00000558910 TOMM34Q15785 309 aaPredicted RBP10.82□□□□□ -0.68
TPM1-216ENST00000558910 TIGD2Q4W5G0 525 aa10.82□□□□□ -0.68
TPM1-216ENST00000558910 ATAD3BQ5T9A4 648 aa10.82□□□□□ -0.68
TPM1-216ENST00000558910 FBXW10Q5XX13 1052 aa10.82□□□□□ -0.68
TPM1-216ENST00000558910 CAMKMTQ7Z624 323 aa10.82□□□□□ -0.68
TPM1-216ENST00000558910 DMRTC2Q8IXT2 367 aaPredicted RBP10.82□□□□□ -0.68
TPM1-216ENST00000558910 ZNF527Q8NB42 609 aa10.82□□□□□ -0.68
TPM1-216ENST00000558910 OR8J2Q8NGG1 315 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms