RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 APOPT1Q96IL0 206 aa12.19□□□□□ -0.46
SNRPA1-204ENST00000558020 ACTRT3Q9BYD9 372 aa12.19□□□□□ -0.46
SNRPA1-204ENST00000558020 OR10A4Q9H209 315 aa12.19□□□□□ -0.46
SNRPA1-204ENST00000558020 MKS1Q9NXB0 559 aa12.19□□□□□ -0.46
SNRPA1-204ENST00000558020 GPR52Q9Y2T5 361 aa12.19□□□□□ -0.46
SNRPA1-204ENST00000558020 TNFSF11O14788 317 aa12.18□□□□□ -0.46
SNRPA1-204ENST00000558020 PIP5K1BO14986 540 aa12.18□□□□□ -0.46
SNRPA1-204ENST00000558020 SCAMP2O15127 329 aaKnown RBP12.18□□□□□ -0.46
SNRPA1-204ENST00000558020 SIAH2O43255 324 aa12.18□□□□□ -0.46
SNRPA1-204ENST00000558020 PEX11AO75192 247 aa12.18□□□□□ -0.46
SNRPA1-204ENST00000558020 OPN1LWP04000 364 aa12.18□□□□□ -0.46
SNRPA1-204ENST00000558020 PRPS1L1P21108 318 aa12.18□□□□□ -0.46
SNRPA1-204ENST00000558020 PSMA4P25789 261 aaKnown RBP12.18□□□□□ -0.46
SNRPA1-204ENST00000558020 ELK4P28324 431 aa12.18□□□□□ -0.46
SNRPA1-204ENST00000558020 CCKARP32238 428 aa12.18□□□□□ -0.46
SNRPA1-204ENST00000558020 LASP1Q14847 261 aaKnown RBP12.18□□□□□ -0.46
SNRPA1-204ENST00000558020 UGT3A2Q3SY77 523 aa12.18□□□□□ -0.46
SNRPA1-204ENST00000558020 TMEM201Q5SNT2 666 aa12.18□□□□□ -0.46
SNRPA1-204ENST00000558020 CCNJQ5T5M9 372 aa12.18□□□□□ -0.46
SNRPA1-204ENST00000558020 CDC73Q6P1J9 531 aa12.18□□□□□ -0.46
SNRPA1-204ENST00000558020 STAC2Q6ZMT1 411 aa12.18□□□□□ -0.46
SNRPA1-204ENST00000558020 STEAP2Q8NFT2 490 aa12.18□□□□□ -0.46
SNRPA1-204ENST00000558020 CDS1Q92903 461 aa12.18□□□□□ -0.46
SNRPA1-204ENST00000558020 CPNE4Q96A23 557 aaPredicted RBP12.18□□□□□ -0.46
SNRPA1-204ENST00000558020 ADGRG7Q96K78 797 aa12.18□□□□□ -0.46
SNRPA1-204ENST00000558020 KLHL15Q96M94 604 aa12.18□□□□□ -0.46
SNRPA1-204ENST00000558020 USB1Q9BQ65 265 aaKnown RBP12.18□□□□□ -0.46
SNRPA1-204ENST00000558020 GP6Q9HCN6 339 aa12.18□□□□□ -0.46
SNRPA1-204ENST00000558020 NGBQ9NPG2 151 aa12.18□□□□□ -0.46
SNRPA1-204ENST00000558020 CLEC4AQ9UMR7 237 aa12.18□□□□□ -0.46
SNRPA1-204ENST00000558020 GPC6Q9Y625 555 aaPredicted RBP12.18□□□□□ -0.46
SNRPA1-204ENST00000558020 VPS13CQ709C8 3753 aa12.18□□□□□ -0.46
SNRPA1-204ENST00000558020 A0A0J9YW62 118 aa12.17□□□□□ -0.46
SNRPA1-204ENST00000558020 DUXAA6NLW8 204 aa12.17□□□□□ -0.46
SNRPA1-204ENST00000558020 CFLARO15519 480 aa12.17□□□□□ -0.46
SNRPA1-204ENST00000558020 TMCC2O75069 709 aa12.17□□□□□ -0.46
SNRPA1-204ENST00000558020 SLU7O95391 586 aaKnown RBP12.17□□□□□ -0.46
SNRPA1-204ENST00000558020 CHRNGP07510 517 aa12.17□□□□□ -0.46
SNRPA1-204ENST00000558020 LINGO3P0C6S8 592 aa12.17□□□□□ -0.46
SNRPA1-204ENST00000558020 LAMP1P11279 417 aa12.17□□□□□ -0.46
SNRPA1-204ENST00000558020 EFNA1P20827 205 aaPredicted RBP12.17□□□□□ -0.46
SNRPA1-204ENST00000558020 P2RX1P51575 399 aa12.17□□□□□ -0.46
SNRPA1-204ENST00000558020 SUMO3P55854 103 aaPredicted RBP12.17□□□□□ -0.46
SNRPA1-204ENST00000558020 MAD2L1Q13257 205 aaPredicted RBP12.17□□□□□ -0.46
SNRPA1-204ENST00000558020 CTU2Q2VPK5 515 aaKnown RBP12.17□□□□□ -0.46
SNRPA1-204ENST00000558020 KLHL26Q53HC5 615 aa12.17□□□□□ -0.46
SNRPA1-204ENST00000558020 YTHDF3Q7Z739 585 aaKnown RBP12.17□□□□□ -0.46
SNRPA1-204ENST00000558020 ZAR1Q86SH2 424 aa12.17□□□□□ -0.46
SNRPA1-204ENST00000558020 FNDC5Q8NAU1 212 aa12.17□□□□□ -0.46
SNRPA1-204ENST00000558020 OR7A2PQ8NGA2 310 aa12.17□□□□□ -0.46
SNRPA1-204ENST00000558020 PSMA8Q8TAA3 256 aa12.17□□□□□ -0.46
SNRPA1-204ENST00000558020 TMEM171Q8WVE6 324 aa12.17□□□□□ -0.46
SNRPA1-204ENST00000558020 COQ8BQ96D53 544 aa12.17□□□□□ -0.46
SNRPA1-204ENST00000558020 MARK4Q96L34 752 aa12.17□□□□□ -0.46
SNRPA1-204ENST00000558020 TACO1Q9BSH4 297 aaKnown RBP12.17□□□□□ -0.46
SNRPA1-204ENST00000558020 ROPN1BQ9BZX4 212 aaPredicted RBP12.17□□□□□ -0.46
SNRPA1-204ENST00000558020 ACTR6Q9GZN1 396 aa12.17□□□□□ -0.46
SNRPA1-204ENST00000558020 CXorf56Q9H5V9 222 aa12.17□□□□□ -0.46
SNRPA1-204ENST00000558020 TMEM185BQ9H7F4 350 aa12.17□□□□□ -0.46
SNRPA1-204ENST00000558020 ROPN1Q9HAT0 212 aaPredicted RBP12.17□□□□□ -0.46
SNRPA1-204ENST00000558020 FBXO34Q9NWN3 711 aa12.17□□□□□ -0.46
SNRPA1-204ENST00000558020 ACTL7BQ9Y614 415 aa12.17□□□□□ -0.46
SNRPA1-204ENST00000558020 ARID1AO14497 2285 aa12.17□□□□□ -0.46
SNRPA1-204ENST00000558020 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.16□□□□□ -0.46
SNRPA1-204ENST00000558020 TMEM233B4DJY2 109 aa12.16□□□□□ -0.46
SNRPA1-204ENST00000558020 ZNF195O14628 629 aa12.16□□□□□ -0.46
SNRPA1-204ENST00000558020 PRKD3O94806 890 aa12.16□□□□□ -0.46
SNRPA1-204ENST00000558020 HEXAP06865 529 aa12.16□□□□□ -0.46
SNRPA1-204ENST00000558020 PSMB1P20618 241 aaKnown RBP12.16□□□□□ -0.46
SNRPA1-204ENST00000558020 SFTPDP35247 375 aa12.16□□□□□ -0.46
SNRPA1-204ENST00000558020 ATP12AP54707 1039 aa12.16□□□□□ -0.46
SNRPA1-204ENST00000558020 EXOSC6Q5RKV6 272 aaKnown RBP12.16□□□□□ -0.46
SNRPA1-204ENST00000558020 C6orf136Q5SQH8 315 aa12.16□□□□□ -0.46
SNRPA1-204ENST00000558020 DCST2Q5T1A1 773 aa12.16□□□□□ -0.46
SNRPA1-204ENST00000558020 IL23RQ5VWK5 629 aa12.16□□□□□ -0.46
SNRPA1-204ENST00000558020 Q71RC1 249 aaPredicted RBP12.16□□□□□ -0.46
SNRPA1-204ENST00000558020 KRTAP1-3Q8IUG1 177 aa12.16□□□□□ -0.46
SNRPA1-204ENST00000558020 SLC43A2Q8N370 569 aa12.16□□□□□ -0.46
SNRPA1-204ENST00000558020 TOR1AIP2Q8NFQ8 470 aa12.16□□□□□ -0.46
SNRPA1-204ENST00000558020 AGR3Q8TD06 166 aa12.16□□□□□ -0.46
SNRPA1-204ENST00000558020 SFXN5Q8TD22 340 aa12.16□□□□□ -0.46
SNRPA1-204ENST00000558020 TUBGCP3Q96CW5 907 aa12.16□□□□□ -0.46
SNRPA1-204ENST00000558020 OTUB1Q96FW1 271 aaPredicted RBP12.16□□□□□ -0.46
SNRPA1-204ENST00000558020 PERPQ96FX8 193 aa12.16□□□□□ -0.46
SNRPA1-204ENST00000558020 Q96MF0 132 aa12.16□□□□□ -0.46
SNRPA1-204ENST00000558020 HS3ST6Q96QI5 342 aa12.16□□□□□ -0.46
SNRPA1-204ENST00000558020 SMR3AQ99954 134 aa12.16□□□□□ -0.46
SNRPA1-204ENST00000558020 GSX2Q9BZM3 304 aa12.16□□□□□ -0.46
SNRPA1-204ENST00000558020 BHLHE41Q9C0J9 482 aaPredicted RBP12.16□□□□□ -0.46
SNRPA1-204ENST00000558020 C12orf49Q9H741 205 aa12.16□□□□□ -0.46
SNRPA1-204ENST00000558020 SIRT3Q9NTG7 399 aaPredicted RBP12.16□□□□□ -0.46
SNRPA1-204ENST00000558020 PCDHGB4Q9UN71 923 aa12.16□□□□□ -0.46
SNRPA1-204ENST00000558020 CARD8Q9Y2G2 431 aa12.16□□□□□ -0.46
SNRPA1-204ENST00000558020 DTNAQ9Y4J8 743 aa12.16□□□□□ -0.46
SNRPA1-204ENST00000558020 ABCA2Q9BZC7 2435 aa12.15□□□□□ -0.46
SNRPA1-204ENST00000558020 KLF4O43474 513 aa12.15□□□□□ -0.46
SNRPA1-204ENST00000558020 EIF4E2O60573 245 aaKnown RBP12.15□□□□□ -0.46
SNRPA1-204ENST00000558020 THBDP07204 575 aa12.15□□□□□ -0.46
SNRPA1-204ENST00000558020 YES1P07947 543 aa12.15□□□□□ -0.46
SNRPA1-204ENST00000558020 NUDT17P0C025 328 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms