RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 WNT2P09544 360 aa3.48□□□□□ -1.85
PRPF39-210ENST00000556718 CPN1P15169 458 aa3.48□□□□□ -1.85
PRPF39-210ENST00000556718 RPL34P49207 117 aaKnown RBP3.48□□□□□ -1.85
PRPF39-210ENST00000556718 GSK3BP49841 420 aa3.48□□□□□ -1.85
PRPF39-210ENST00000556718 AP3M2P53677 418 aa3.48□□□□□ -1.85
PRPF39-210ENST00000556718 ATP5IP56385 69 aaPredicted RBP3.48□□□□□ -1.85
PRPF39-210ENST00000556718 RWDD2BP57060 319 aa3.48□□□□□ -1.85
PRPF39-210ENST00000556718 UBE2HP62256 183 aa3.48□□□□□ -1.85
PRPF39-210ENST00000556718 MS4A2Q01362 244 aa3.48□□□□□ -1.85
PRPF39-210ENST00000556718 EWSR1Q01844 656 aaKnown RBP eCLIP3.48□□□□□ -1.85
PRPF39-210ENST00000556718 FGL1Q08830 312 aa3.48□□□□□ -1.85
PRPF39-210ENST00000556718 ABRAXAS2Q15018 415 aa3.48□□□□□ -1.85
PRPF39-210ENST00000556718 MICAQ29983 383 aa3.48□□□□□ -1.85
PRPF39-210ENST00000556718 SNAI3Q3KNW1 292 aa3.48□□□□□ -1.85
PRPF39-210ENST00000556718 ZNF506Q5JVG8 444 aa3.48□□□□□ -1.85
PRPF39-210ENST00000556718 C10orf120Q5SQS8 335 aa3.48□□□□□ -1.85
PRPF39-210ENST00000556718 ZC2HC1BQ5TFG8 222 aa3.48□□□□□ -1.85
PRPF39-210ENST00000556718 PYHIN1Q6K0P9 492 aa3.48□□□□□ -1.85
PRPF39-210ENST00000556718 KCNIP4Q6PIL6 250 aa3.48□□□□□ -1.85
PRPF39-210ENST00000556718 TAS2R42Q7RTR8 314 aa3.48□□□□□ -1.85
PRPF39-210ENST00000556718 LRRC43Q8N309 656 aa3.48□□□□□ -1.85
PRPF39-210ENST00000556718 BPIFB2Q8N4F0 458 aa3.48□□□□□ -1.85
PRPF39-210ENST00000556718 OR10A7Q8NGE5 316 aa3.48□□□□□ -1.85
PRPF39-210ENST00000556718 FLVCR1-AS1Q8TAF5 88 aa3.48□□□□□ -1.85
PRPF39-210ENST00000556718 TFB1MQ8WVM0 346 aaKnown RBP3.48□□□□□ -1.85
PRPF39-210ENST00000556718 SLC41A3Q96GZ6 507 aa3.48□□□□□ -1.85
PRPF39-210ENST00000556718 SH3YL1Q96HL8 342 aaPredicted RBP3.48□□□□□ -1.85
PRPF39-210ENST00000556718 TGM7Q96PF1 710 aa3.48□□□□□ -1.85
PRPF39-210ENST00000556718 TUBGCP2Q9BSJ2 902 aa3.48□□□□□ -1.85
PRPF39-210ENST00000556718 TIGARQ9NQ88 270 aa3.48□□□□□ -1.85
PRPF39-210ENST00000556718 ASIC3Q9UHC3 531 aa3.48□□□□□ -1.85
PRPF39-210ENST00000556718 ASB3Q9Y575 518 aa3.48□□□□□ -1.85
PRPF39-210ENST00000556718 ALG6Q9Y672 507 aa3.48□□□□□ -1.85
PRPF39-210ENST00000556718 ANKRD36BQ8N2N9 1353 aa3.48□□□□□ -1.85
PRPF39-210ENST00000556718 ARHGAP35Q9NRY4 1499 aa3.47□□□□□ -1.85
PRPF39-210ENST00000556718 PRDM2Q13029 1718 aa3.47□□□□□ -1.85
PRPF39-210ENST00000556718 SYNJ1O43426 1573 aa3.47□□□□□ -1.85
PRPF39-210ENST00000556718 HFM1A2PYH4 1435 aa3.47□□□□□ -1.85
PRPF39-210ENST00000556718 USP6P35125 1406 aa3.47□□□□□ -1.85
PRPF39-210ENST00000556718 YEATS2Q9ULM3 1422 aa3.47□□□□□ -1.85
PRPF39-210ENST00000556718 RPL37AP8A6NKH3 93 aa3.47□□□□□ -1.85
PRPF39-210ENST00000556718 ZNF487B1APH4 448 aa3.47□□□□□ -1.85
PRPF39-210ENST00000556718 PRRG1O14668 218 aa3.47□□□□□ -1.85
PRPF39-210ENST00000556718 ERLIN1O75477 346 aa3.47□□□□□ -1.85
PRPF39-210ENST00000556718 IL1BP01584 269 aa3.47□□□□□ -1.85
PRPF39-210ENST00000556718 H2BFMP0C1H6 154 aa3.47□□□□□ -1.85
PRPF39-210ENST00000556718 XRCC1P18887 633 aaPredicted RBP3.47□□□□□ -1.85
PRPF39-210ENST00000556718 PGCP20142 388 aa3.47□□□□□ -1.85
PRPF39-210ENST00000556718 RPL4P36578 427 aaKnown RBP3.47□□□□□ -1.85
PRPF39-210ENST00000556718 POU3F4P49335 361 aa3.47□□□□□ -1.85
PRPF39-210ENST00000556718 DHPSP49366 369 aaPredicted RBP3.47□□□□□ -1.85
PRPF39-210ENST00000556718 CCL14Q16627 93 aa3.47□□□□□ -1.85
PRPF39-210ENST00000556718 CYP51A1Q16850 503 aa3.47□□□□□ -1.85
PRPF39-210ENST00000556718 HSP90B2PQ58FF3 399 aa3.47□□□□□ -1.85
PRPF39-210ENST00000556718 ACSM5Q6NUN0 579 aa3.47□□□□□ -1.85
PRPF39-210ENST00000556718 RFWD3Q6PCD5 774 aa3.47□□□□□ -1.85
PRPF39-210ENST00000556718 METTL7BQ6UX53 244 aa3.47□□□□□ -1.85
PRPF39-210ENST00000556718 CYS1Q717R9 158 aa3.47□□□□□ -1.85
PRPF39-210ENST00000556718 CCDC80Q76M96 950 aa3.47□□□□□ -1.85
PRPF39-210ENST00000556718 NANOGNBQ7Z5D8 188 aa3.47□□□□□ -1.85
PRPF39-210ENST00000556718 MOB3BQ86TA1 216 aa3.47□□□□□ -1.85
PRPF39-210ENST00000556718 DHRSXQ8N5I4 330 aa3.47□□□□□ -1.85
PRPF39-210ENST00000556718 Q8N9G6 341 aaPredicted RBP3.47□□□□□ -1.85
PRPF39-210ENST00000556718 SUMF1Q8NBK3 374 aa3.47□□□□□ -1.85
PRPF39-210ENST00000556718 AENQ8WTP8 325 aaKnown RBP3.47□□□□□ -1.85
PRPF39-210ENST00000556718 RPL3LQ92901 407 aaKnown RBP3.47□□□□□ -1.85
PRPF39-210ENST00000556718 NTNG2Q96CW9 530 aa3.47□□□□□ -1.85
PRPF39-210ENST00000556718 RPRD1AQ96P16 312 aaPredicted RBP3.47□□□□□ -1.85
PRPF39-210ENST00000556718 SLC6A7Q99884 636 aa3.47□□□□□ -1.85
PRPF39-210ENST00000556718 TMEM121Q9BTD3 319 aa3.47□□□□□ -1.85
PRPF39-210ENST00000556718 TMEM43Q9BTV4 400 aa3.47□□□□□ -1.85
PRPF39-210ENST00000556718 NXF5Q9H1B4 397 aaKnown RBP3.47□□□□□ -1.85
PRPF39-210ENST00000556718 BATF3Q9NR55 127 aa3.47□□□□□ -1.85
PRPF39-210ENST00000556718 FAM120CQ9NX05 1096 aaKnown RBP3.47□□□□□ -1.85
PRPF39-210ENST00000556718 EHFQ9NZC4 300 aa3.47□□□□□ -1.85
PRPF39-210ENST00000556718 PIPOXQ9P0Z9 390 aa3.47□□□□□ -1.85
PRPF39-210ENST00000556718 LCMT1Q9UIC8 334 aa3.47□□□□□ -1.85
PRPF39-210ENST00000556718 PTBP2Q9UKA9 531 aaKnown RBP3.47□□□□□ -1.85
PRPF39-210ENST00000556718 IGHV3OR16-10A0A075B7F0 116 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 IGHV3-16A0A0C4DH30 117 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 FAM240BA0A1B0GVZ2 78 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 ESYT2A0FGR8 921 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 ZSCAN5BA6NJL1 495 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 GOLGA6L19H0YKK7 550 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 AP3B1O00203 1094 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 BTN3A3O00478 584 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 OR7A17O14581 309 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 POLR3GO15318 223 aaPredicted RBP3.46□□□□□ -1.86
PRPF39-210ENST00000556718 MSH4O15457 936 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 GPRIN2O60269 458 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 B4GALT2O60909 372 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 B3GAT3O94766 335 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 ERLIN2O94905 339 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 IGHV3-9P01782 118 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 ACADSP16219 412 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 GCFC2P16383 781 aaKnown RBP3.46□□□□□ -1.86
PRPF39-210ENST00000556718 TPSB2P20231 275 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 MX1P20591 662 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 CDH5P33151 784 aaPredicted RBP3.46□□□□□ -1.86
PRPF39-210ENST00000556718 ACVR1BP36896 505 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms