RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 UTP20O75691 2785 aaKnown RBP3.69□□□□□ -1.82
PRPF39-209ENST00000556353 MUC22E2RYF6 1773 aaPredicted RBP3.69□□□□□ -1.82
PRPF39-209ENST00000556353 A0A1W2PPW3 197 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 ARHGEF35A5YM69 484 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 H0YIV9 168 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 SLC16A4O15374 487 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 B3GAT3O94766 335 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 PRAMEF12O95522 483 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 ECDO95905 644 aaPredicted RBP3.69□□□□□ -1.82
PRPF39-209ENST00000556353 ADRB2P07550 413 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 OR4Q2P0C623 313 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 CXCL8P10145 99 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 MYBL1P10243 752 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 KCNE1P15382 129 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 ADSSP30520 456 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 FEN1P39748 380 aaKnown RBP3.69□□□□□ -1.82
PRPF39-209ENST00000556353 CCT6AP40227 531 aaKnown RBP3.69□□□□□ -1.82
PRPF39-209ENST00000556353 RPL34P49207 117 aaKnown RBP3.69□□□□□ -1.82
PRPF39-209ENST00000556353 CRYBA2P53672 197 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 AP3M2P53677 418 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 SLC12A3P55017 1021 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 PLTPP55058 493 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 HADHBP55084 474 aaKnown RBP3.69□□□□□ -1.82
PRPF39-209ENST00000556353 PEX3P56589 373 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 MAP3K7CLP57077 242 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 HTD2P86397 168 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 BFSP1Q12934 665 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 ORC2Q13416 577 aaPredicted RBP3.69□□□□□ -1.82
PRPF39-209ENST00000556353 CUL2Q13617 745 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 TRADDQ15628 312 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 MAPK6Q16659 721 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 KNOP1Q1ED39 458 aaKnown RBP3.69□□□□□ -1.82
PRPF39-209ENST00000556353 TMEM44Q2T9K0 475 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 ZRANB3Q5FWF4 1079 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 PPM1LQ5SGD2 360 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 LIN9Q5TKA1 542 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 ZNF600Q6ZNG1 722 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 RGS9BPQ6ZS82 235 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 Q6ZVQ6 151 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 HIPK1Q86Z02 1210 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 GRAMD2AQ8IUY3 354 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 ZBTB8OSQ8IWT0 167 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 PARP8Q8N3A8 854 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 ARL14Q8N4G2 192 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 C11orf42Q8N5U0 333 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 TEX26Q8N6G2 289 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 STKLD1Q8NE28 680 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 OR10T2Q8NGX3 314 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 RNF139Q8WU17 664 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 ITLN1Q8WWA0 313 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 NCLNQ969V3 563 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 EXOC4Q96A65 974 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 NABP1Q96AH0 204 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 CLDN23Q96B33 292 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 SGK3Q96BR1 496 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 RUFY1Q96T51 708 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 CITED2Q99967 270 aaPredicted RBP3.69□□□□□ -1.82
PRPF39-209ENST00000556353 XKR8Q9H6D3 395 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 WDR41Q9HAD4 459 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 KCNK13Q9HB14 408 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 NMRK1Q9NWW6 199 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 COX16Q9P0S2 106 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 MBD2Q9UBB5 411 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 FETUBQ9UGM5 382 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 IL19Q9UHD0 177 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 HOOK1Q9UJC3 728 aaKnown RBP3.69□□□□□ -1.82
PRPF39-209ENST00000556353 GMEB1Q9Y692 573 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 CENPEQ02224 2701 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 TDRD6O60522 2096 aaKnown RBP3.69□□□□□ -1.82
PRPF39-209ENST00000556353 ZNF462Q96JM2 2506 aa3.69□□□□□ -1.82
PRPF39-209ENST00000556353 RELNP78509 3460 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 TRAV6A0A075B6T7 132 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 A0A1W2PQ72 361 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 TTC26A0AVF1 554 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 NDUFS8O00217 210 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 MAGEB3O15480 346 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 HCRTO43612 131 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 UBTFL6P0CB48 400 aaPredicted RBP3.68□□□□□ -1.82
PRPF39-209ENST00000556353 MCF2P10911 925 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 ATF6P18850 670 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 CTNNA2P26232 953 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 DRD3P35462 400 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 HNMTP50135 292 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 RBP5P82980 135 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 TWF1Q12792 350 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 ZBTB6Q15916 424 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 MAJINQ3KP22 176 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 C2orf76Q3KRA6 126 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 AARDQ4LEZ3 155 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 SLC39A12Q504Y0 691 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 ZNF506Q5JVG8 444 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 THOC7Q6I9Y2 204 aaKnown RBP3.68□□□□□ -1.82
PRPF39-209ENST00000556353 CENPPQ6IPU0 288 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 Q6ZS52 159 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 TRMT11Q7Z4G4 463 aaKnown RBP3.68□□□□□ -1.82
PRPF39-209ENST00000556353 C5orf24Q7Z6I8 188 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 DNAJB7Q7Z6W7 309 aaPredicted RBP3.68□□□□□ -1.82
PRPF39-209ENST00000556353 TMEM150AQ86TG1 271 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 OR56B2PQ8NGI1 322 aa3.68□□□□□ -1.82
PRPF39-209ENST00000556353 ZNF461Q8TAF7 563 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms